RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	KANK3	Q6NY19	840 aa		19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	SH2D3A	Q9BRG2	576 aa		19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	MYMK	A6NI61	221 aa		19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	EYA4	O95677	639 aa		19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	SSB	P05455	408 aa	Known RBP eCLIP	19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	CNGA1	P29973	690 aa		19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	YWHAB	P31946	246 aa	Known RBP	19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	PRKCE	Q02156	737 aa		19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	DPYD	Q12882	1025 aa		19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	UTP14C	Q5TAP6	766 aa	Known RBP	19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	ANO5	Q75V66	913 aa		19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	SV2B	Q7L1I2	683 aa		19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	SLAIN1	Q8ND83	568 aa		19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	AFAP1L1	Q8TED9	768 aa		19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	ATP6V0A1	Q93050	837 aa		19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	NACC1	Q96RE7	527 aa		19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	MAGEF1	Q9HAY2	307 aa		19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	CTAGE5	O15320	804 aa		19.81	■□□□□ 0.76
SPIN3-238	ENST00000640421	SEPT4	O43236	478 aa		19.81	■□□□□ 0.76
SPIN3-238	ENST00000640421	INHA	P05111	366 aa		19.81	■□□□□ 0.76
SPIN3-238	ENST00000640421	MMP3	P08254	477 aa		19.81	■□□□□ 0.76
SPIN3-238	ENST00000640421	HOXD8	P13378	290 aa	Predicted RBP	19.81	■□□□□ 0.76
SPIN3-238	ENST00000640421	GRK4	P32298	578 aa		19.81	■□□□□ 0.76
SPIN3-238	ENST00000640421	ARSH	Q5FYA8	562 aa		19.81	■□□□□ 0.76
SPIN3-238	ENST00000640421	PLA2G4F	Q68DD2	849 aa		19.81	■□□□□ 0.76
SPIN3-238	ENST00000640421	KCTD17	Q8N5Z5	321 aa		19.81	■□□□□ 0.76
SPIN3-238	ENST00000640421	SYT2	Q8N9I0	419 aa	Predicted RBP	19.81	■□□□□ 0.76
SPIN3-238	ENST00000640421	TRIM9	Q9C026	710 aa		19.81	■□□□□ 0.76
SPIN3-238	ENST00000640421	KIAA1468	Q9P260	1216 aa		19.81	■□□□□ 0.76
SPIN3-238	ENST00000640421	PTPN22	Q9Y2R2	807 aa		19.81	■□□□□ 0.76
SPIN3-238	ENST00000640421	PCDHA5	Q9Y5H7	936 aa		19.81	■□□□□ 0.76
SPIN3-238	ENST00000640421	EMSY	Q7Z589	1322 aa		19.81	■□□□□ 0.76
SPIN3-238	ENST00000640421	STAT5B	P51692	787 aa		19.8	■□□□□ 0.76
SPIN3-238	ENST00000640421	SPATA20	Q8TB22	786 aa		19.8	■□□□□ 0.76
SPIN3-238	ENST00000640421	LOXHD1	Q8IVV2	1947 aa		19.8	■□□□□ 0.76
SPIN3-238	ENST00000640421	ARID2	Q68CP9	1835 aa		19.8	■□□□□ 0.76
SPIN3-238	ENST00000640421	NPHP3-ACAD11	A0A0J9YXS1	232 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	MYADML2	A6NDP7	307 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421		A6NJR5	290 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	GTPBP6	O43824	516 aa	Predicted RBP	19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	DUSP11	O75319	330 aa	Known RBP	19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	LGALS2	P05162	132 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	ZNF286B	P0CG31	522 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	HSPA1A	P0DMV8	641 aa	Known RBP	19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	HSPA1B	P0DMV9	641 aa	Known RBP	19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	CYP11B2	P19099	503 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	RARRES1	P49788	294 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	NPEPPS	P55786	919 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	SH3TC2	Q8TF17	1288 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	RUSC1	Q9BVN2	902 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	MARK3	P27448	753 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	LBX1	P52954	281 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	FAM160B1	Q5W0V3	765 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	GPBP1	Q86WP2	473 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	GLG1	Q92896	1179 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	C7orf25	Q9BPX7	421 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	C16orf70	Q9BSU1	422 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	AZI2	Q9H6S1	392 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	TUBE1	Q9UJT0	475 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	DBR1	Q9UK59	544 aa	Known RBP	19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421		Q9Y3F1	56 aa		19.79	■□□□□ 0.76
SPIN3-238	ENST00000640421	SARS	P49591	514 aa	Known RBP	19.78	■□□□□ 0.76
SPIN3-238	ENST00000640421	BEX3	Q00994	111 aa		19.78	■□□□□ 0.76
SPIN3-238	ENST00000640421	RAD51AP2	Q09MP3	1159 aa		19.78	■□□□□ 0.76
SPIN3-238	ENST00000640421	DYM	Q7RTS9	669 aa		19.78	■□□□□ 0.76
SPIN3-238	ENST00000640421	PLPPR4	Q7Z2D5	763 aa		19.78	■□□□□ 0.76
SPIN3-238	ENST00000640421	DDX12P	Q92771	950 aa		19.78	■□□□□ 0.76
SPIN3-238	ENST00000640421	DNAJC19	Q96DA6	116 aa		19.78	■□□□□ 0.76
SPIN3-238	ENST00000640421	HOOK1	Q9UJC3	728 aa	Known RBP	19.78	■□□□□ 0.76
SPIN3-238	ENST00000640421	SYNRG	Q9UMZ2	1314 aa		19.78	■□□□□ 0.76
SPIN3-238	ENST00000640421	KLRC4	O43908	158 aa		19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	PPFIA4	O75335	1185 aa		19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	OAT	P04181	439 aa		19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	CACNB1	Q02641	598 aa	Predicted RBP	19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	NT5DC1	Q5TFE4	455 aa		19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	RINT1	Q6NUQ1	792 aa		19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	FUCA2	Q9BTY2	467 aa		19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	BIN1	O00499	593 aa		19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	PGK1	P00558	417 aa		19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	XRCC6	P12956	609 aa	Known RBP eCLIP	19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	DGKD	Q16760	1214 aa		19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	XKR3	Q5GH77	459 aa		19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	C1orf186	Q6ZWK4	172 aa		19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	CCDC34	Q96HJ3	373 aa		19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	AP5M1	Q9H0R1	490 aa		19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	SMARCAD1	Q9H4L7	1026 aa		19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	POLD4	Q9HCU8	107 aa		19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	ANKEF1	Q9NU02	776 aa		19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	SEPT9	Q9UHD8	586 aa	Predicted RBP	19.77	■□□□□ 0.76
SPIN3-238	ENST00000640421	DKC1	O60832	514 aa	Known RBP eCLIP	19.76	■□□□□ 0.75
SPIN3-238	ENST00000640421	LETM1	O95202	739 aa	Predicted RBP	19.76	■□□□□ 0.75
SPIN3-238	ENST00000640421	RARB	P10826	455 aa		19.76	■□□□□ 0.75
SPIN3-238	ENST00000640421	BMP6	P22004	513 aa		19.76	■□□□□ 0.75
SPIN3-238	ENST00000640421	GJA9	P57773	515 aa		19.76	■□□□□ 0.75
SPIN3-238	ENST00000640421	AMPD3	Q01432	767 aa		19.76	■□□□□ 0.75
SPIN3-238	ENST00000640421	PLCB4	Q15147	1175 aa		19.76	■□□□□ 0.75
SPIN3-238	ENST00000640421	FSCN1	Q16658	493 aa	Known RBP	19.76	■□□□□ 0.75
SPIN3-238	ENST00000640421	XKR9	Q5GH70	373 aa		19.76	■□□□□ 0.75
SPIN3-238	ENST00000640421	ISM2	Q6H9L7	571 aa		19.76	■□□□□ 0.75
SPIN3-238	ENST00000640421	SMARCE1	Q969G3	411 aa		19.76	■□□□□ 0.75

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms