RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 FGFBP2Q9BYJ0 223 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 UNC45AQ9H3U1 944 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 KCNH7Q9NS40 1196 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 TBC1D7Q9P0N9 293 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 GUCA1BQ9UMX6 200 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 COL4A3BPQ9Y5P4 624 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 DDX39AO00148 427 aaKnown RBP16.66■□□□□ 0.26
TRIM3-215ENST00000639856 IPO7O95373 1038 aaKnown RBP16.66■□□□□ 0.26
TRIM3-215ENST00000639856 IREB2P48200 963 aaKnown RBP16.66■□□□□ 0.26
TRIM3-215ENST00000639856 PGM5Q15124 567 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 PCNX4Q63HM2 1172 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 SYT2Q8N9I0 419 aaPredicted RBP16.66■□□□□ 0.26
TRIM3-215ENST00000639856 RBM46Q8TBY0 533 aaKnown RBP16.66■□□□□ 0.26
TRIM3-215ENST00000639856 CEP63Q96MT8 703 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 RMDN3Q96TC7 470 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 HSD17B14Q9BPX1 270 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 FAM53CQ9NYF3 392 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 TRIM10Q9UDY6 481 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 DNM3Q9UQ16 869 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 GLTPD2A6NH11 291 aa16.65■□□□□ 0.26
TRIM3-215ENST00000639856 IRF6O14896 467 aa16.65■□□□□ 0.26
TRIM3-215ENST00000639856 KRT18P05783 430 aaKnown RBP16.65■□□□□ 0.26
TRIM3-215ENST00000639856 PLS1Q14651 629 aa16.65■□□□□ 0.26
TRIM3-215ENST00000639856 TKFCQ3LXA3 575 aa16.65■□□□□ 0.26
TRIM3-215ENST00000639856 CCDC122Q5T0U0 273 aa16.65■□□□□ 0.26
TRIM3-215ENST00000639856 SCFD1Q8WVM8 642 aa16.65■□□□□ 0.26
TRIM3-215ENST00000639856 DYDC2Q96IM9 177 aa16.65■□□□□ 0.26
TRIM3-215ENST00000639856 POLR3CQ9BUI4 534 aaPredicted RBP16.65■□□□□ 0.26
TRIM3-215ENST00000639856 KCTD10Q9H3F6 313 aa16.65■□□□□ 0.26
TRIM3-215ENST00000639856 MMRN2Q9H8L6 949 aa16.65■□□□□ 0.26
TRIM3-215ENST00000639856 PXMP2Q9NR77 195 aa16.65■□□□□ 0.26
TRIM3-215ENST00000639856 FAM207AQ9NSI2 230 aaPredicted RBP16.65■□□□□ 0.26
TRIM3-215ENST00000639856 PNMA2Q9UL42 364 aa16.65■□□□□ 0.26
TRIM3-215ENST00000639856 RABGAP1Q9Y3P9 1069 aa16.65■□□□□ 0.26
TRIM3-215ENST00000639856 UBIAD1Q9Y5Z9 338 aa16.65■□□□□ 0.26
TRIM3-215ENST00000639856 EPHB6O15197 1021 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 KRT86O43790 486 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 MYCLP12524 364 aaPredicted RBP16.64■□□□□ 0.25
TRIM3-215ENST00000639856 OAZ1P54368 228 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 CHMP4BP1P59074 171 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 TTLL12Q14166 644 aaPredicted RBP16.64■□□□□ 0.25
TRIM3-215ENST00000639856 KIAA1328Q86T90 577 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 TPH2Q8IWU9 490 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 MAP3K20Q9NYL2 800 aaKnown RBP16.64■□□□□ 0.25
TRIM3-215ENST00000639856 LOC285556D6RIA3 1793 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 ZBTB39O15060 712 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 SLITRK3O94933 977 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 GNA14O95837 355 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 MARSP56192 900 aaKnown RBP16.64■□□□□ 0.25
TRIM3-215ENST00000639856 ITGB3BPQ13352 177 aaPredicted RBP16.64■□□□□ 0.25
TRIM3-215ENST00000639856 CCDC40Q4G0X9 1142 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 B3GNT9Q6UX72 402 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 NELFCDQ8IXH7 590 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 PIGOQ8TEQ8 1089 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 PDCD2LQ9BRP1 358 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 TEKT3Q9BXF9 490 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 TEX13BQ9BXU2 312 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 EPC1Q9H2F5 836 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 BHMT2Q9H2M3 363 aa16.64■□□□□ 0.25
TRIM3-215ENST00000639856 TAF1DQ9H5J8 278 aaPredicted RBP16.64■□□□□ 0.25
TRIM3-215ENST00000639856 WRAP73Q9P2S5 460 aaPredicted RBP16.64■□□□□ 0.25
TRIM3-215ENST00000639856 SCN4AP35499 1836 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 ATP2A1O14983 1001 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 BCRP11274 1271 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 ERCC3P19447 782 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 GIT2Q14161 759 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 BMS1Q14692 1282 aaKnown RBP16.63■□□□□ 0.25
TRIM3-215ENST00000639856 ARHGEF16Q5VV41 709 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 TMCO3Q6UWJ1 677 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 SMAP1Q8IYB5 467 aaPredicted RBP16.63■□□□□ 0.25
TRIM3-215ENST00000639856 KCTD17Q8N5Z5 321 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 ZC3H15Q8WU90 426 aaKnown RBP16.63■□□□□ 0.25
TRIM3-215ENST00000639856 JAKMIP2Q96AA8 810 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 CCDC42Q96M95 316 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 HOXC10Q9NYD6 342 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 PUF60Q9UHX1 559 aaKnown RBP16.63■□□□□ 0.25
TRIM3-215ENST00000639856 LCTP09848 1927 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 DHX15O43143 795 aaKnown RBP16.63■□□□□ 0.25
TRIM3-215ENST00000639856 ZRANB2O95218 330 aaKnown RBP eCLIP16.63■□□□□ 0.25
TRIM3-215ENST00000639856 ZSCAN20P17040 1043 aaPredicted RBP16.63■□□□□ 0.25
TRIM3-215ENST00000639856 NF2P35240 595 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 TUBB4BP68371 445 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 AMPD2Q01433 879 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 MTMR1Q13613 665 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 WHAMMP3Q1A5X7 153 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 EDRF1Q3B7T1 1238 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 GADL1Q6ZQY3 521 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 ZC3H3Q8IXZ2 948 aaKnown RBP16.63■□□□□ 0.25
TRIM3-215ENST00000639856 KRT222Q8N1A0 295 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 SAMD3Q8N6K7 520 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 EHBP1Q8NDI1 1231 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 RUSC1Q9BVN2 902 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 EDEM3Q9BZQ6 932 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 ZHX3Q9H4I2 956 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 ZSWIM4Q9H7M6 989 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 AGO4Q9HCK5 861 aaKnown RBP16.63■□□□□ 0.25
TRIM3-215ENST00000639856 POLD4Q9HCU8 107 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 JADE2Q9NQC1 790 aa16.63■□□□□ 0.25
TRIM3-215ENST00000639856 TFR2Q9UP52 801 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms