RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 RASA4BC9J798 803 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 M0R3G1 203 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 RASA4O43374 803 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 DDAH1O94760 285 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 KLHL18O94889 574 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 TFDP1Q14186 410 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 PRPF18Q99633 342 aaKnown RBP14.03□□□□□ -0.16
UBE3A-228ENST00000638155 ELAC2Q9BQ52 826 aaKnown RBP14.03□□□□□ -0.16
UBE3A-228ENST00000638155 GCNT4Q9P109 453 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 RASSF3Q86WH2 238 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 BBS2Q9BXC9 721 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 GOLGA8TH3BQL2 631 aa14.02□□□□□ -0.16
UBE3A-228ENST00000638155 S100A9P06702 114 aaKnown RBP14.02□□□□□ -0.16
UBE3A-228ENST00000638155 GOLGA8HP0CJ92 632 aa14.02□□□□□ -0.16
UBE3A-228ENST00000638155 PSMD2Q13200 908 aa14.02□□□□□ -0.16
UBE3A-228ENST00000638155 PRKG1Q13976 671 aa14.02□□□□□ -0.16
UBE3A-228ENST00000638155 POTEEQ6S8J3 1075 aa14.02□□□□□ -0.16
UBE3A-228ENST00000638155 COPS6Q7L5N1 327 aa14.02□□□□□ -0.16
UBE3A-228ENST00000638155 LRRC49Q8IUZ0 686 aa14.02□□□□□ -0.16
UBE3A-228ENST00000638155 PLEKHA8Q96JA3 519 aa14.02□□□□□ -0.16
UBE3A-228ENST00000638155 FAM32AQ9Y421 112 aaKnown RBP14.02□□□□□ -0.16
UBE3A-228ENST00000638155 ABCD1P33897 745 aa14.02□□□□□ -0.16
UBE3A-228ENST00000638155 TRIM16LQ309B1 348 aa14.02□□□□□ -0.16
UBE3A-228ENST00000638155 RNF219Q5W0B1 726 aaPredicted RBP14.02□□□□□ -0.16
UBE3A-228ENST00000638155 NME9Q86XW9 330 aa14.02□□□□□ -0.16
UBE3A-228ENST00000638155 HOXA7P31268 230 aaPredicted RBP14.02□□□□□ -0.17
UBE3A-228ENST00000638155 KRT26Q7Z3Y9 468 aa14.02□□□□□ -0.17
UBE3A-228ENST00000638155 ANKRD49Q8WVL7 239 aa14.02□□□□□ -0.17
UBE3A-228ENST00000638155 MTERF3Q96E29 417 aa14.02□□□□□ -0.17
UBE3A-228ENST00000638155 PDCD10Q9BUL8 212 aa14.02□□□□□ -0.17
UBE3A-228ENST00000638155 EMILIN1Q9Y6C2 1016 aa14.02□□□□□ -0.17
UBE3A-228ENST00000638155 C5orf58C9J3I9 102 aa14.02□□□□□ -0.17
UBE3A-228ENST00000638155 HNRNPDLO14979 420 aaKnown RBP14.02□□□□□ -0.17
UBE3A-228ENST00000638155 CLK1P49759 484 aaKnown RBP14.02□□□□□ -0.17
UBE3A-228ENST00000638155 STX3Q13277 289 aa14.02□□□□□ -0.17
UBE3A-228ENST00000638155 STXBP2Q15833 593 aa14.02□□□□□ -0.17
UBE3A-228ENST00000638155 SIX6OS1Q8N1H7 587 aa14.02□□□□□ -0.17
UBE3A-228ENST00000638155 FAM160B1Q5W0V3 765 aa14.02□□□□□ -0.17
UBE3A-228ENST00000638155 IYDQ6PHW0 289 aa14.02□□□□□ -0.17
UBE3A-228ENST00000638155 PA2G4Q9UQ80 394 aaKnown RBP14.02□□□□□ -0.17
UBE3A-228ENST00000638155 FBXO18Q8NFZ0 1043 aa14.02□□□□□ -0.17
UBE3A-228ENST00000638155 PI4K2BG5E9Z4 385 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 C8orf34Q49A92 452 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 TEX2Q8IWB9 1127 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 FANCEQ9HB96 536 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 GINM1Q9NU53 330 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 AIPL1Q9NZN9 384 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 H2AFY2Q9P0M6 372 aaPredicted RBP14.01□□□□□ -0.17
UBE3A-228ENST00000638155 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.01□□□□□ -0.17
UBE3A-228ENST00000638155 PTPN23Q9H3S7 1636 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 ARHGEF37A1IGU5 675 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 MLH1P40692 756 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 CASS4Q9NQ75 786 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 RGL1Q9NZL6 768 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 IRS4O14654 1257 aaPredicted RBP14.01□□□□□ -0.17
UBE3A-228ENST00000638155 SLC35F6Q8N357 371 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 FAM149B1Q96BN6 582 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 CEP95Q96GE4 821 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 PCDHGB4Q9UN71 923 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 TECP42680 631 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 TGS1Q96RS0 853 aaKnown RBP14.01□□□□□ -0.17
UBE3A-228ENST00000638155 PLAAQ9Y263 795 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 TJP3O95049 919 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 TRIP13Q15645 432 aaPredicted RBP14.01□□□□□ -0.17
UBE3A-228ENST00000638155 KIAA1755Q5JYT7 1200 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 ADALQ6DHV7 355 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 STAMQ92783 540 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 MAGEB5Q9BZ81 275 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 SMARCAD1Q9H4L7 1026 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 AATFQ9NY61 560 aaKnown RBP eCLIP14.01□□□□□ -0.17
UBE3A-228ENST00000638155 PRG4Q92954 1404 aaPredicted RBP14.01□□□□□ -0.17
UBE3A-228ENST00000638155 GOLGA8MH3BSY2 632 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 CDC27P30260 824 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 TTC30AQ86WT1 665 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 RNF139Q8WU17 664 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 CNOT6LQ96LI5 555 aaKnown RBP14.01□□□□□ -0.17
UBE3A-228ENST00000638155 SLC7A5P2Q9GIP4 190 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 LRFN2Q9ULH4 789 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 KRT6AP02538 564 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 KRT6BP04259 564 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 CXCR5P32302 372 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 KRT6CP48668 564 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 SLFNL1Q499Z3 407 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 FAF2Q96CS3 445 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 PCDHA12Q9UN75 941 aa14.01□□□□□ -0.17
UBE3A-228ENST00000638155 FAM83GA6ND36 823 aa14□□□□□ -0.17
UBE3A-228ENST00000638155 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14□□□□□ -0.17
UBE3A-228ENST00000638155 TSC22D2O75157 780 aa14□□□□□ -0.17
UBE3A-228ENST00000638155 LARGE2Q8N3Y3 721 aa14□□□□□ -0.17
UBE3A-228ENST00000638155 ARMT1Q9H993 441 aa14□□□□□ -0.17
UBE3A-228ENST00000638155 SUGCTQ9HAC7 445 aa14□□□□□ -0.17
UBE3A-228ENST00000638155 VPS54Q9P1Q0 977 aa14□□□□□ -0.17
UBE3A-228ENST00000638155 TEX28O15482 410 aa14□□□□□ -0.17
UBE3A-228ENST00000638155 CNBD1Q8NA66 436 aa14□□□□□ -0.17
UBE3A-228ENST00000638155 CASP10Q92851 521 aa14□□□□□ -0.17
UBE3A-228ENST00000638155 GADD45BO75293 160 aaPredicted RBP14□□□□□ -0.17
UBE3A-228ENST00000638155 CHMP1BQ7LBR1 199 aa14□□□□□ -0.17
UBE3A-228ENST00000638155 RPAP3Q9H6T3 665 aaPredicted RBP14□□□□□ -0.17
UBE3A-228ENST00000638155 CLCA2Q9UQC9 943 aa14□□□□□ -0.17
UBE3A-228ENST00000638155 PFKFB1P16118 471 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms