RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 EPN3Q9H201 632 aa22.01■■□□□ 1.11
SYNGAP1-227ENST00000638142 GREB1LQ9C091 1923 aaPredicted RBP22■■□□□ 1.11
SYNGAP1-227ENST00000638142 XRCC5P13010 732 aaKnown RBP22■■□□□ 1.11
SYNGAP1-227ENST00000638142 PON1P27169 355 aa22■■□□□ 1.11
SYNGAP1-227ENST00000638142 STAT3P40763 770 aa22■■□□□ 1.11
SYNGAP1-227ENST00000638142 PDE4CQ08493 712 aa22■■□□□ 1.11
SYNGAP1-227ENST00000638142 AP3B2Q13367 1082 aa22■■□□□ 1.11
SYNGAP1-227ENST00000638142 QRICH1Q2TAL8 776 aa22■■□□□ 1.11
SYNGAP1-227ENST00000638142 ALKBH5Q6P6C2 394 aaKnown RBP22■■□□□ 1.11
SYNGAP1-227ENST00000638142 MYH4Q9Y623 1939 aa22■■□□□ 1.11
SYNGAP1-227ENST00000638142 C6orf229H3BNL8 230 aa22■■□□□ 1.11
SYNGAP1-227ENST00000638142 ERVK-9P63128 1117 aa22■■□□□ 1.11
SYNGAP1-227ENST00000638142 SPIRE1Q08AE8 756 aa22■■□□□ 1.11
SYNGAP1-227ENST00000638142 TRADDQ15628 312 aa22■■□□□ 1.11
SYNGAP1-227ENST00000638142 CATSPER3Q86XQ3 398 aa22■■□□□ 1.11
SYNGAP1-227ENST00000638142 SYT2Q8N9I0 419 aaPredicted RBP22■■□□□ 1.11
SYNGAP1-227ENST00000638142 METTL14Q9HCE5 456 aaKnown RBP22■■□□□ 1.11
SYNGAP1-227ENST00000638142 PLAAQ9Y263 795 aa22■■□□□ 1.11
SYNGAP1-227ENST00000638142 SAMM50Q9Y512 469 aa22■■□□□ 1.11
SYNGAP1-227ENST00000638142 PCDHA1Q9Y5I3 950 aa22■■□□□ 1.11
SYNGAP1-227ENST00000638142 LY75O60449 1722 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 SRRM3A6NNA2 597 aaPredicted RBP21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 PGRMC1O00264 195 aaKnown RBP21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 TBX3O15119 743 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 HLTFQ14527 1009 aaKnown RBP eCLIP21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 VPS36Q86VN1 386 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 KAT2BQ92831 832 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 PAGR1Q9BTK6 254 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 NENFQ9UMX5 172 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 DNM3Q9UQ16 869 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 STK24Q9Y6E0 443 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 GOLGA6L10A6NI86 522 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 BHMG1C9JSJ3 638 aaPredicted RBP21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 MPHOSPH10O00566 681 aaKnown RBP21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 CEP104O60308 925 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 PPP1R37O75864 691 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 RPA1P27694 616 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 INPP5BP32019 993 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 SWT1Q5T5J6 900 aaKnown RBP21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 MCTP2Q6DN12 878 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 FAM196AQ6ZSG2 479 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 MAATS1Q7Z4T9 603 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 ETNPPLQ8TBG4 499 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 LMBR1Q8WVP7 490 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 LRRC45Q96CN5 670 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 UIMC1Q96RL1 719 aa21.99■■□□□ 1.11
SYNGAP1-227ENST00000638142 A0A0A6YYK5 440 aaPredicted RBP21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 CCDC188H7C350 402 aa21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 SLC16A3O15427 465 aaKnown RBP21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 HLA-DOAP06340 250 aa21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 ECHS1P30084 290 aa21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 EPHA7Q15375 998 aa21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 SFR1Q86XK3 245 aa21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 TPCN2Q8NHX9 752 aa21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 CRYGNQ8WXF5 182 aa21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 REEP2Q9BRK0 252 aa21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 INTUQ9ULD6 942 aa21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 ZBTB48P10074 688 aaPredicted RBP21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 ADRA2BP18089 450 aa21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 RPL13P26373 211 aaKnown RBP21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 HOXA10P31260 410 aaPredicted RBP21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 HOXD13P35453 343 aa21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 ITGB3BPQ13352 177 aaPredicted RBP21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 BMT2Q1RMZ1 405 aa21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 CEP85LQ5SZL2 805 aa21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 RBM46Q8TBY0 533 aaKnown RBP21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 CCDC17Q96LX7 622 aa21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 TMBIM4Q9HC24 238 aa21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 TYW1Q9NV66 732 aaKnown RBP21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 USP40Q9NVE5 1235 aa21.98■■□□□ 1.11
SYNGAP1-227ENST00000638142 QSER1Q2KHR3 1735 aa21.97■■□□□ 1.11
SYNGAP1-227ENST00000638142 MDH1P40925 334 aaKnown RBP21.97■■□□□ 1.11
SYNGAP1-227ENST00000638142 ARHGAP4P98171 946 aa21.97■■□□□ 1.11
SYNGAP1-227ENST00000638142 GUCY1A3Q02108 690 aa21.97■■□□□ 1.11
SYNGAP1-227ENST00000638142 PTGISQ16647 500 aa21.97■■□□□ 1.11
SYNGAP1-227ENST00000638142 SLFN11Q7Z7L1 901 aa21.97■■□□□ 1.11
SYNGAP1-227ENST00000638142 ARFGAP2Q8N6H7 521 aa21.97■■□□□ 1.11
SYNGAP1-227ENST00000638142 CEP89Q96ST8 783 aa21.97■■□□□ 1.11
SYNGAP1-227ENST00000638142 COA1Q9GZY4 146 aa21.97■■□□□ 1.11
SYNGAP1-227ENST00000638142 JAM2P57087 298 aa21.97■■□□□ 1.11
SYNGAP1-227ENST00000638142 IRX3P78415 501 aaPredicted RBP21.97■■□□□ 1.11
SYNGAP1-227ENST00000638142 PABPC4Q13310 644 aaKnown RBP eCLIP21.97■■□□□ 1.11
SYNGAP1-227ENST00000638142 Q4G0T1 1027 aa21.97■■□□□ 1.11
SYNGAP1-227ENST00000638142 MICALCLQ6ZW33 695 aa21.97■■□□□ 1.11
SYNGAP1-227ENST00000638142 NOC2LQ9Y3T9 749 aaKnown RBP21.97■■□□□ 1.11
SYNGAP1-227ENST00000638142 MEIS2O14770 477 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 SART1O43290 800 aaKnown RBP21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 AKAP3O75969 853 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 KIAA0754O94854 1291 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 H2AFZP0C0S5 128 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 SPATA31C1P0DKV0 1188 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 HSD17B3P37058 310 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 PSMC6P62333 389 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 DCAF17Q5H9S7 520 aaPredicted RBP21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 H2AFVQ71UI9 128 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 SYCE1Q8N0S2 351 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 METTL13Q8N6R0 699 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 DCAF4Q8WV16 495 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 SUCLA2Q9P2R7 463 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms