RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 PLCH1Q4KWH8 1693 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 ECE2O60344 883 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 PDHA1P08559 390 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 CCNE1P24864 410 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 OCRLQ01968 901 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 ACVR2BQ13705 512 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 NUP188Q5SRE5 1749 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 ZNF790Q6PG37 636 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 INPP5DQ92835 1189 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 ZNF333Q96JL9 665 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 GALNT8Q9NY28 637 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 SIK3Q9Y2K2 1263 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 ATP6V1G1O75348 118 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 PALMO75781 387 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 UPP2O95045 317 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 KLK7P49862 253 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 PMS1P54277 932 aaKnown RBP13.05□□□□□ -0.32
CAPN3-221ENST00000638141 DHX9Q08211 1270 aaKnown RBP13.05□□□□□ -0.32
CAPN3-221ENST00000638141 MKRN3Q13064 507 aaKnown RBP13.05□□□□□ -0.32
CAPN3-221ENST00000638141 SH2D4BQ5SQS7 431 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 KIF2BQ8N4N8 673 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 STKLD1Q8NE28 680 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 SYN2Q92777 582 aaPredicted RBP13.05□□□□□ -0.32
CAPN3-221ENST00000638141 TNFRSF25Q93038 417 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 DUSP9Q99956 384 aaKnown RBP13.05□□□□□ -0.32
CAPN3-221ENST00000638141 CUEDC2Q9H467 287 aa13.05□□□□□ -0.32
CAPN3-221ENST00000638141 CNOT7Q9UIV1 285 aaKnown RBP13.05□□□□□ -0.32
CAPN3-221ENST00000638141 MAGEA13PA6NCF6 341 aa13.04□□□□□ -0.32
CAPN3-221ENST00000638141 SIGLEC16A6NMB1 481 aa13.04□□□□□ -0.32
CAPN3-221ENST00000638141 RPL13P26373 211 aaKnown RBP13.04□□□□□ -0.32
CAPN3-221ENST00000638141 INHBCP55103 352 aa13.04□□□□□ -0.32
CAPN3-221ENST00000638141 TMED1Q13445 227 aa13.04□□□□□ -0.32
CAPN3-221ENST00000638141 WTAPQ15007 396 aa13.04□□□□□ -0.32
CAPN3-221ENST00000638141 GSTA3Q16772 222 aa13.04□□□□□ -0.32
CAPN3-221ENST00000638141 C6orf118Q5T5N4 469 aa13.04□□□□□ -0.32
CAPN3-221ENST00000638141 KLHL7Q8IXQ5 586 aa13.04□□□□□ -0.32
CAPN3-221ENST00000638141 SYCP3Q8IZU3 236 aa13.04□□□□□ -0.32
CAPN3-221ENST00000638141 TAF4BQ92750 862 aa13.04□□□□□ -0.32
CAPN3-221ENST00000638141 UTP4Q969X6 686 aaKnown RBP13.04□□□□□ -0.32
CAPN3-221ENST00000638141 CNOT6LQ96LI5 555 aaKnown RBP13.04□□□□□ -0.32
CAPN3-221ENST00000638141 PCMTD1Q96MG8 357 aaPredicted RBP13.04□□□□□ -0.32
CAPN3-221ENST00000638141 PRMT1Q99873 361 aaKnown RBP13.04□□□□□ -0.32
CAPN3-221ENST00000638141 SELENOSQ9BQE4 189 aa13.04□□□□□ -0.32
CAPN3-221ENST00000638141 ZCWPW1Q9H0M4 648 aa13.04□□□□□ -0.32
CAPN3-221ENST00000638141 AIPL1Q9NZN9 384 aa13.04□□□□□ -0.32
CAPN3-221ENST00000638141 SLIT2O94813 1529 aa13.04□□□□□ -0.32
CAPN3-221ENST00000638141 ATP8B3O60423 1300 aa13.04□□□□□ -0.32
CAPN3-221ENST00000638141 UBE2Q2LH0YL09 131 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 GSTT1P30711 240 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 FLT3P36888 993 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 SCNN1BP51168 640 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 RASSF7Q02833 373 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 CSGALNACT2Q8N6G5 542 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 LZTS2Q9BRK4 669 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 USP21Q9UK80 565 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 ZMYND8Q9ULU4 1186 aaPredicted RBP13.03□□□□□ -0.32
CAPN3-221ENST00000638141 COMMD3-BMI1R4GMX3 469 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 TMCC1O94876 653 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 SKIP12755 728 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 MYL6BP14649 208 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 MTIF2P46199 727 aaKnown RBP13.03□□□□□ -0.32
CAPN3-221ENST00000638141 PTDSS1P48651 473 aaKnown RBP13.03□□□□□ -0.32
CAPN3-221ENST00000638141 CNGA2Q16280 664 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 SPDYAQ5MJ70 313 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 AKNAD1Q5T1N1 836 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 FITM2Q8N6M3 262 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 FANCBQ8NB91 859 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 P2RX5Q93086 422 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 MYL10Q9BUA6 226 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 NOC4LQ9BVI4 516 aaKnown RBP13.03□□□□□ -0.32
CAPN3-221ENST00000638141 PABPC3Q9H361 631 aaKnown RBP13.03□□□□□ -0.32
CAPN3-221ENST00000638141 PREBQ9HCU5 417 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.03□□□□□ -0.32
CAPN3-221ENST00000638141 ZSWIM5Q9P217 1185 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 STOML1Q9UBI4 398 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 RREB1Q92766 1687 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 ATAD5Q96QE3 1844 aa13.03□□□□□ -0.32
CAPN3-221ENST00000638141 PGRMC1O00264 195 aaKnown RBP13.02□□□□□ -0.32
CAPN3-221ENST00000638141 NVLO15381 856 aaKnown RBP13.02□□□□□ -0.32
CAPN3-221ENST00000638141 BUB1O43683 1085 aa13.02□□□□□ -0.32
CAPN3-221ENST00000638141 EYA4O95677 639 aa13.02□□□□□ -0.32
CAPN3-221ENST00000638141 SHBGP04278 402 aa13.02□□□□□ -0.32
CAPN3-221ENST00000638141 SNRPA1P09661 255 aaKnown RBP13.02□□□□□ -0.32
CAPN3-221ENST00000638141 VHLP40337 213 aa13.02□□□□□ -0.32
CAPN3-221ENST00000638141 SLC1A4P43007 532 aa13.02□□□□□ -0.32
CAPN3-221ENST00000638141 ZAP70P43403 619 aa13.02□□□□□ -0.32
CAPN3-221ENST00000638141 USP11P51784 963 aa13.02□□□□□ -0.32
CAPN3-221ENST00000638141 EVA1CP58658 441 aa13.02□□□□□ -0.32
CAPN3-221ENST00000638141 LSAMPQ13449 338 aa13.02□□□□□ -0.32
CAPN3-221ENST00000638141 ENOX2Q16206 610 aaKnown RBP13.02□□□□□ -0.32
CAPN3-221ENST00000638141 FOXR2Q6PJQ5 311 aa13.02□□□□□ -0.32
CAPN3-221ENST00000638141 TAOK1Q7L7X3 1001 aa13.02□□□□□ -0.32
CAPN3-221ENST00000638141 BAP1Q92560 729 aa13.02□□□□□ -0.32
CAPN3-221ENST00000638141 STAMQ92783 540 aa13.02□□□□□ -0.32
CAPN3-221ENST00000638141 GATA6Q92908 595 aa13.02□□□□□ -0.32
CAPN3-221ENST00000638141 EPB41L4BQ9H329 900 aa13.02□□□□□ -0.32
CAPN3-221ENST00000638141 DCLRE1BQ9H816 532 aa13.02□□□□□ -0.32
CAPN3-221ENST00000638141 LARSQ9P2J5 1176 aaKnown RBP13.02□□□□□ -0.32
CAPN3-221ENST00000638141 USP20Q9Y2K6 914 aa13.02□□□□□ -0.32
CAPN3-221ENST00000638141 KLRC4O43908 158 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms