RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 MTF1Q14872 753 aa23.95■■□□□ 1.42
CHRNA7-228ENST00000637519 ZC2HC1CQ53FD0 456 aaPredicted RBP23.95■■□□□ 1.42
CHRNA7-228ENST00000637519 KIAA1217Q5T5P2 1943 aa23.95■■□□□ 1.42
CHRNA7-228ENST00000637519 SOWAHDA6NJG2 315 aa23.95■■□□□ 1.42
CHRNA7-228ENST00000637519 FKBP3Q00688 224 aaKnown RBP23.95■■□□□ 1.42
CHRNA7-228ENST00000637519 TBC1D8BQ0IIM8 1120 aa23.95■■□□□ 1.42
CHRNA7-228ENST00000637519 SYCP1Q15431 976 aa23.95■■□□□ 1.42
CHRNA7-228ENST00000637519 Q3C1V9 767 aa23.95■■□□□ 1.42
CHRNA7-228ENST00000637519 PLA2G4FQ68DD2 849 aa23.95■■□□□ 1.42
CHRNA7-228ENST00000637519 PADI6Q6TGC4 694 aa23.95■■□□□ 1.42
CHRNA7-228ENST00000637519 PPP1R13BQ96KQ4 1090 aa23.95■■□□□ 1.42
CHRNA7-228ENST00000637519 HIP1RO75146 1068 aa23.94■■□□□ 1.42
CHRNA7-228ENST00000637519 YWHABP31946 246 aaKnown RBP23.94■■□□□ 1.42
CHRNA7-228ENST00000637519 KRT76Q01546 638 aa23.94■■□□□ 1.42
CHRNA7-228ENST00000637519 DAW1Q8N136 415 aa23.94■■□□□ 1.42
CHRNA7-228ENST00000637519 PARVGQ9HBI0 331 aa23.94■■□□□ 1.42
CHRNA7-228ENST00000637519 RBPJLQ9UBG7 517 aa23.94■■□□□ 1.42
CHRNA7-228ENST00000637519 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.94■■□□□ 1.42
CHRNA7-228ENST00000637519 USO1O60763 962 aaKnown RBP23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 RARRES1P49788 294 aa23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 DNM2P50570 870 aa23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 ALDH5A1P51649 535 aaPredicted RBP23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 SP2Q02086 613 aa23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 MAPK7Q13164 816 aa23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 KNOP1Q1ED39 458 aaKnown RBP23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 TOGARAM2Q6ZUX3 1019 aa23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 FIZ1Q96SL8 496 aa23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 SOWAHBA6NEL2 793 aa23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 RASSF10A6NK89 507 aa23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 BACH1O14867 736 aa23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 TPM2P07951 284 aa23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 CYP2C8P10632 490 aa23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 JAK3P52333 1124 aa23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 VWA3BQ502W6 1294 aa23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 CCDC155Q8N6L0 562 aa23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 SLC10A4Q96EP9 437 aa23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 OLFML3Q9NRN5 406 aa23.93■■□□□ 1.42
CHRNA7-228ENST00000637519 A0A1W2PQC6 194 aa23.92■■□□□ 1.42
CHRNA7-228ENST00000637519 TTC26A0AVF1 554 aa23.92■■□□□ 1.42
CHRNA7-228ENST00000637519 ARHGAP6O43182 974 aa23.92■■□□□ 1.42
CHRNA7-228ENST00000637519 PGK2P07205 417 aa23.92■■□□□ 1.42
CHRNA7-228ENST00000637519 TNNT1P13805 278 aa23.92■■□□□ 1.42
CHRNA7-228ENST00000637519 GAP43P17677 238 aa23.92■■□□□ 1.42
CHRNA7-228ENST00000637519 NPEPPSP55786 919 aa23.92■■□□□ 1.42
CHRNA7-228ENST00000637519 CCDC40Q4G0X9 1142 aa23.92■■□□□ 1.42
CHRNA7-228ENST00000637519 SEPT14Q6ZU15 432 aa23.92■■□□□ 1.42
CHRNA7-228ENST00000637519 PANX2Q96RD6 677 aa23.92■■□□□ 1.42
CHRNA7-228ENST00000637519 DESI2Q9BSY9 194 aa23.92■■□□□ 1.42
CHRNA7-228ENST00000637519 NDST4Q9H3R1 872 aa23.92■■□□□ 1.42
CHRNA7-228ENST00000637519 ABHD10Q9NUJ1 306 aa23.92■■□□□ 1.42
CHRNA7-228ENST00000637519 PFASO15067 1338 aa23.92■■□□□ 1.42
CHRNA7-228ENST00000637519 FGFR1OPO95684 399 aaKnown RBP23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 MAN2A1Q16706 1144 aa23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 ODR4Q5SWX8 454 aa23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 JPH1Q9HDC5 661 aaPredicted RBP23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 FBXO40Q9UH90 709 aa23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 ZMYM2Q9UBW7 1377 aa23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 POTEB2H3BUK9 544 aa23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 STX10O60499 249 aa23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 KIF20AO95235 890 aa23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 NR2F2P24468 414 aa23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 GUCY2CP25092 1073 aa23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 SFNP31947 248 aa23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 ZNF131P52739 623 aa23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 PSMC5P62195 406 aa23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 ADAM9Q13443 819 aa23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 FASTKD5Q7L8L6 764 aaKnown RBP23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 CNGA4Q8IV77 575 aa23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 DNERQ8NFT8 737 aa23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 PCMTD1Q96MG8 357 aaPredicted RBP23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 RRAGCQ9HB90 399 aa23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 GABBR1Q9UBS5 961 aa23.91■■□□□ 1.42
CHRNA7-228ENST00000637519 SPATA31C2B4DYI2 1134 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 KRT9P35527 623 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 KCNJ6P48051 423 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 SNAPC2Q13487 334 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 STXBP2Q15833 593 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 WDR78Q5VTH9 848 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 ZNF746Q6NUN9 644 aaPredicted RBP23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 FOXR2Q6PJQ5 311 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 RAD9BQ6WBX8 426 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 EEPD1Q7L9B9 569 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 FAM178BQ8IXR5 827 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 GPRC5CQ9NQ84 441 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 CLIC2O15247 247 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 ZNF862O60290 1169 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 TPM1P09493 284 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 BMT2Q1RMZ1 405 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 GNPTABQ3T906 1256 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 NYAP1Q6ZVC0 841 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 C4orf19Q8IY42 314 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 ZNF526Q8TF50 670 aaPredicted RBP23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 CCDC43Q96MW1 224 aaKnown RBP23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 KCND1Q9NSA2 647 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 AGPAT5Q9NUQ2 364 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 KCND2Q9NZV8 630 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 DBR1Q9UK59 544 aaKnown RBP23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 ODF2LQ9ULJ1 636 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 PCDHA10Q9Y5I2 948 aa23.9■■□□□ 1.42
CHRNA7-228ENST00000637519 MAFGO15525 162 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms