RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 SHCBP1Q8NEM2 672 aa2.51□□□□□ -2.01
SCN1A-215ENST00000637285 CCDC140Q96MF4 163 aa2.51□□□□□ -2.01
SCN1A-215ENST00000637285 ZDHHC5Q9C0B5 715 aa2.51□□□□□ -2.01
SCN1A-215ENST00000637285 AGO3Q9H9G7 860 aaKnown RBP2.51□□□□□ -2.01
SCN1A-215ENST00000637285 PACSIN3Q9UKS6 424 aa2.51□□□□□ -2.01
SCN1A-215ENST00000637285 FAM184BQ9ULE4 1060 aa2.51□□□□□ -2.01
SCN1A-215ENST00000637285 NUB1Q9Y5A7 615 aa2.51□□□□□ -2.01
SCN1A-215ENST00000637285 INO80B-WBP1J3KQ70 363 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 ACOT7O00154 380 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 NKRFO15226 690 aaKnown RBP eCLIP2.5□□□□□ -2.01
SCN1A-215ENST00000637285 SLC26A4O43511 780 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 MSCO60682 206 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 GNAT1P11488 350 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 MRE11P49959 708 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 MEOX1P50221 254 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 SPIRE1Q08AE8 756 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 ZNF662Q6ZS27 426 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 OTOP2Q7RTS6 562 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 RTKN2Q8IZC4 609 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 ANKRD35Q8N283 1001 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 UHMK1Q8TAS1 419 aaKnown RBP2.5□□□□□ -2.01
SCN1A-215ENST00000637285 SLC25A43Q8WUT9 341 aaPredicted RBP2.5□□□□□ -2.01
SCN1A-215ENST00000637285 CPLX3Q8WVH0 158 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 INO80BQ9C086 356 aaPredicted RBP2.5□□□□□ -2.01
SCN1A-215ENST00000637285 BCL11AQ9H165 835 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 OR10A2Q9H208 303 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 MSL2Q9HCI7 577 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 ARHGAP28Q9P2N2 729 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 DSEQ9UL01 958 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 SH3BP1Q9Y3L3 701 aa2.5□□□□□ -2.01
SCN1A-215ENST00000637285 A0A1W2PRX2 142 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 KIAA0355O15063 1070 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 SOX9P48436 509 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 MAN2A2P49641 1150 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 CASP7P55210 303 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 GFRA1P56159 465 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 RACK1P63244 317 aaKnown RBP2.49□□□□□ -2.01
SCN1A-215ENST00000637285 IL13RA1P78552 427 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 DBPQ10586 325 aaPredicted RBP2.49□□□□□ -2.01
SCN1A-215ENST00000637285 PAK2Q13177 524 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 TOB2Q14106 344 aaPredicted RBP2.49□□□□□ -2.01
SCN1A-215ENST00000637285 NCAPHQ15003 741 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 PTPAQ15257 358 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 ZNF326Q5BKZ1 582 aaKnown RBP2.49□□□□□ -2.01
SCN1A-215ENST00000637285 OLFML1Q6UWY5 402 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 KCTD1Q719H9 257 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 GSPT2Q8IYD1 628 aaKnown RBP2.49□□□□□ -2.01
SCN1A-215ENST00000637285 SYNE4Q8N205 404 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 ZNF276Q8N554 614 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 PROKR1Q8TCW9 393 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 GIPC2Q8TF65 315 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 MPHOSPH9Q99550 1183 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 MLST8Q9BVC4 326 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 CD244Q9BZW8 370 aa2.49□□□□□ -2.01
SCN1A-215ENST00000637285 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.48□□□□□ -2.01
SCN1A-215ENST00000637285 TRAF5O00463 557 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 RIN1Q13671 783 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 LY6G5CQ5SRR4 150 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 SLC35F1Q5T1Q4 408 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 HECTD2Q5U5R9 776 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 KCNV1Q6PIU1 500 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 USP53Q70EK8 1073 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 ERICH6Q7L0X2 663 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 FAM169BQ8N8A8 192 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 WDR48Q8TAF3 677 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 MIEF2Q96C03 454 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 C1orf159Q96HA4 380 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 SHDQ96IW2 340 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 PHF20Q9BVI0 1012 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 BCL2L13Q9BXK5 485 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 GPR87Q9BY21 358 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 FBXO10Q9UK96 956 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 NPFFR2Q9Y5X5 522 aa2.48□□□□□ -2.01
SCN1A-215ENST00000637285 SPATA31A6Q5VVP1 1343 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 GRID2IPA4D2P6 1211 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 PROB1E7EW31 1015 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 ABHD16AO95870 558 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 GRK2P25098 689 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 GRK3P35626 688 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 STAT3P40763 770 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 NASPP49321 788 aaPredicted RBP2.47□□□□□ -2.01
SCN1A-215ENST00000637285 STAT5BP51692 787 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 EPHA5P54756 1037 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 FANCCQ00597 558 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 HGFACQ04756 655 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 EIF4HQ15056 248 aaKnown RBP2.47□□□□□ -2.01
SCN1A-215ENST00000637285 LDLRAD1Q5T700 205 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 BTBD8Q5XKL5 378 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 TRIM68Q6AZZ1 485 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 SP5Q6BEB4 398 aaPredicted RBP2.47□□□□□ -2.01
SCN1A-215ENST00000637285 RD3Q7Z3Z2 195 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 LENG9Q96B70 501 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 PGBD4Q96DM1 585 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 TRAIPQ9BWF2 469 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 PDGFDQ9GZP0 370 aaPredicted RBP2.47□□□□□ -2.01
SCN1A-215ENST00000637285 SYNPO2LQ9H987 977 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 RSAD1Q9HA92 442 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 GPR27Q9NS67 375 aa2.47□□□□□ -2.01
SCN1A-215ENST00000637285 RIC8BQ9NVN3 520 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms