RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 MXRA8Q9BRK3 442 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 UNC45AQ9H3U1 944 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 MRFAP1Q9Y605 127 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 RSPH10B2B2RC85 870 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 SLITRK3O94933 977 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 RSPH10BP0C881 870 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 GPS2Q13227 327 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 PLS1Q14651 629 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 MTF1Q14872 753 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 MCF2L2Q86YR7 1114 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 CCDC65Q8IXS2 484 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 GPR161Q8N6U8 529 aaKnown RBP12.69□□□□□ -0.38
CLN6-217ENST00000636964 KCNH7Q9NS40 1196 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 EIF3CLB5ME19 914 aaKnown RBP12.68□□□□□ -0.38
CLN6-217ENST00000636964 SCP2P22307 547 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 MRPS9P82933 396 aaKnown RBP12.68□□□□□ -0.38
CLN6-217ENST00000636964 GIT2Q14161 759 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 SNRNP48Q6IEG0 339 aaKnown RBP12.68□□□□□ -0.38
CLN6-217ENST00000636964 MYOCDQ8IZQ8 938 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 GUF1Q8N442 669 aaKnown RBP12.68□□□□□ -0.38
CLN6-217ENST00000636964 EIF3CQ99613 913 aaKnown RBP12.68□□□□□ -0.38
CLN6-217ENST00000636964 HSD17B14Q9BPX1 270 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 REEP2Q9BRK0 252 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 RUSC1Q9BVN2 902 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 PDE11AQ9HCR9 933 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 WRAP73Q9P2S5 460 aaPredicted RBP12.68□□□□□ -0.38
CLN6-217ENST00000636964 SBF1O95248 1867 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 EEF1GP26641 437 aaKnown RBP12.68□□□□□ -0.38
CLN6-217ENST00000636964 BAATQ14032 418 aaPredicted RBP12.68□□□□□ -0.38
CLN6-217ENST00000636964 RNF207Q6ZRF8 634 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.68□□□□□ -0.38
CLN6-217ENST00000636964 MOB2Q70IA6 237 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 SYT2Q8N9I0 419 aaPredicted RBP12.68□□□□□ -0.38
CLN6-217ENST00000636964 DCPSQ96C86 337 aaKnown RBP12.68□□□□□ -0.38
CLN6-217ENST00000636964 DESI2Q9BSY9 194 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 RNF146Q9NTX7 359 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 RABGAP1Q9Y3P9 1069 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 SOWAHDA6NJG2 315 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 MAGEA9P43362 315 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 KLK7P49862 253 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 CASP5P51878 434 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 PSMD2Q13200 908 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 VGLL4Q14135 290 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 TOGARAM2Q6ZUX3 1019 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 MB21D1Q8N884 522 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.68□□□□□ -0.38
CLN6-217ENST00000636964 RMDN3Q96TC7 470 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 NOC4LQ9BVI4 516 aaKnown RBP12.68□□□□□ -0.38
CLN6-217ENST00000636964 PLEKHA4Q9H4M7 779 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 ARFGAP3Q9NP61 516 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 ADARB2Q9NS39 739 aaKnown RBP12.68□□□□□ -0.38
CLN6-217ENST00000636964 DOCK1Q14185 1865 aa12.68□□□□□ -0.38
CLN6-217ENST00000636964 PPP2R3AQ06190 1150 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 COG2Q14746 738 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 SULF1Q8IWU6 871 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 TSPAN18Q96SJ8 248 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 POLR3CQ9BUI4 534 aaPredicted RBP12.67□□□□□ -0.38
CLN6-217ENST00000636964 TMOD4Q9NZQ9 345 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 VPS18Q9P253 973 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 GOLGA6CA6NDK9 693 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 GOLGA6BA6NDN3 693 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 LGALS16A8MUM7 142 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 IPO7O95373 1038 aaKnown RBP12.67□□□□□ -0.38
CLN6-217ENST00000636964 GOLGA6DP0CG33 693 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 PPP1R2P41236 205 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 PPP2R5CQ13362 524 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 TMEM132BQ14DG7 1078 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 RPAINQ86UA6 219 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 SFR1Q86XK3 245 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 PROCA1Q8NCQ7 364 aaPredicted RBP12.67□□□□□ -0.38
CLN6-217ENST00000636964 TEKT3Q9BXF9 490 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 GOLGA6AQ9NYA3 693 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 CWC15Q9P013 229 aaKnown RBP12.67□□□□□ -0.38
CLN6-217ENST00000636964 AFG3L2Q9Y4W6 797 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 PCDHA2Q9Y5H9 948 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 RPS6KL1Q9Y6S9 549 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 TRAF5O00463 557 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 DSG3P32926 999 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 TBC1D8BQ0IIM8 1120 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 TKFCQ3LXA3 575 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 COBLL1Q53SF7 1204 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 ZNF507Q8TCN5 953 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 NOC3LQ8WTT2 800 aaKnown RBP12.67□□□□□ -0.38
CLN6-217ENST00000636964 ANKZF1Q9H8Y5 726 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.67□□□□□ -0.387e-13■■■■■ 139.7
CLN6-217ENST00000636964 SAMM50Q9Y512 469 aa12.67□□□□□ -0.38
CLN6-217ENST00000636964 TESPA1A2RU30 521 aaPredicted RBP12.66□□□□□ -0.38
CLN6-217ENST00000636964 C19orf81C9J6K1 198 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 ARHGAP6O43182 974 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 STX10O60499 249 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 MFAP3LO75121 409 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 RPS6KA5O75582 802 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 PGM5Q15124 567 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 TTC31Q49AM3 519 aaPredicted RBP12.66□□□□□ -0.38
CLN6-217ENST00000636964 ARHGEF16Q5VV41 709 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 LRRC31Q6UY01 552 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 KRT26Q7Z3Y9 468 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 SCFD1Q8WVM8 642 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 PCMTD1Q96MG8 357 aaPredicted RBP12.66□□□□□ -0.38
CLN6-217ENST00000636964 SH2D3AQ9BRG2 576 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms