RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 EML1O00423 815 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 MEIS2O14770 477 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 PPEF1O14829 653 aaPredicted RBP15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 LRRN2O75325 713 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 TRIM49P0CI25 452 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 TRIM49CP0CI26 452 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 PRLRP16471 622 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 SLC12A3P55017 1021 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 CERKLQ49MI3 558 aaPredicted RBP15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 GLYCTKQ8IVS8 523 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 UBLCP1Q8WVY7 318 aaPredicted RBP15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 NEUROG2Q9H2A3 272 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 LRRC4CQ9HCJ2 640 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 LUC7LQ9NQ29 371 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 SPDYE3A6NKU9 549 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 EIF3HO15372 352 aaKnown RBP eCLIP15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 RPS6KA5O75582 802 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 CFBP00751 764 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 PAK2Q13177 524 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 ZNF211Q13398 564 aaPredicted RBP15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 COBLL1Q53SF7 1204 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 APOBEC3HQ6NTF7 200 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 IRF2BP2Q7Z5L9 587 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 RNF10Q8N5U6 811 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 ZNF622Q969S3 477 aaKnown RBP eCLIP15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 INPP4AQ96PE3 977 aaPredicted RBP15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 MYH7BA7E2Y1 1941 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 SMIM23A6NLE4 172 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 GOLGA8KD6RF30 607 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 SPATA31C1P0DKV0 1188 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 MAGEA9P43362 315 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 KNOP1Q1ED39 458 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 PEX26Q7Z412 305 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 DHX37Q8IY37 1157 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 MYCT1Q8N699 235 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 USP38Q8NB14 1042 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 UHMK1Q8TAS1 419 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 NAGPAQ9UK23 515 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 SCAF8Q9UPN6 1271 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 NR2E1Q9Y466 385 aa15.35■□□□□ 0.05
CACNA1A-228ENST00000636610 DAPK3O43293 454 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 ATP2C2O75185 946 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 AFPP02771 609 aaKnown RBP15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 ICA1Q05084 483 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 ODF2Q5BJF6 829 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 GPATCH4Q5T3I0 446 aaKnown RBP15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 METTL13Q8N6R0 699 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 TSPYL1Q9H0U9 437 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 IGKV6D-41A0A0C4DH26 115 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 TMEM110-MUSTN1A8MSY1 372 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 F5H6K3 240 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 KRIT1O00522 736 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 SART1O43290 800 aaKnown RBP15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 TBCAO75347 108 aaKnown RBP15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 BBOX1O75936 387 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 NR3C1P04150 777 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 TMOD1P28289 359 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 SMARCA1P28370 1054 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 JAG1P78504 1218 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 KLRC3Q07444 240 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 RNF187Q5TA31 235 aaPredicted RBP15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 CCDC174Q6PII3 467 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 PIK3R5Q8WYR1 880 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 TEKT1Q969V4 418 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 FAM163AQ96GL9 167 aaPredicted RBP15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 KDM3AQ9Y4C1 1321 aa15.34■□□□□ 0.05
CACNA1A-228ENST00000636610 SMCHD1A6NHR9 2005 aa15.33■□□□□ 0.05
CACNA1A-228ENST00000636610 SEMA3FQ13275 785 aa15.33■□□□□ 0.05
CACNA1A-228ENST00000636610 VPS72Q15906 364 aa15.33■□□□□ 0.05
CACNA1A-228ENST00000636610 CHADLQ6NUI6 762 aa15.33■□□□□ 0.05
CACNA1A-228ENST00000636610 AADACL2Q6P093 401 aa15.33■□□□□ 0.05
CACNA1A-228ENST00000636610 CEP63Q96MT8 703 aa15.33■□□□□ 0.05
CACNA1A-228ENST00000636610 ATF5Q9Y2D1 282 aaPredicted RBP15.33■□□□□ 0.05
CACNA1A-228ENST00000636610 TTI1O43156 1089 aa15.33■□□□□ 0.04
CACNA1A-228ENST00000636610 KIF4AO95239 1232 aa15.33■□□□□ 0.04
CACNA1A-228ENST00000636610 TRIM51Q9BSJ1 452 aa15.33■□□□□ 0.04
CACNA1A-228ENST00000636610 KCNMB3Q9NPA1 279 aa15.33■□□□□ 0.04
CACNA1A-228ENST00000636610 GDF3Q9NR23 364 aa15.33■□□□□ 0.04
CACNA1A-228ENST00000636610 NOC2LQ9Y3T9 749 aaKnown RBP15.33■□□□□ 0.04
CACNA1A-228ENST00000636610 TISP43B9A030 160 aa15.33■□□□□ 0.04
CACNA1A-228ENST00000636610 MSH4O15457 936 aa15.33■□□□□ 0.04
CACNA1A-228ENST00000636610 NR1D1P20393 614 aa15.33■□□□□ 0.04
CACNA1A-228ENST00000636610 USP8P40818 1118 aa15.33■□□□□ 0.04
CACNA1A-228ENST00000636610 CRKP46108 304 aa15.33■□□□□ 0.04
CACNA1A-228ENST00000636610 CRY2Q49AN0 593 aa15.33■□□□□ 0.04
CACNA1A-228ENST00000636610 IQCKQ8N0W5 287 aa15.33■□□□□ 0.04
CACNA1A-228ENST00000636610 IQCDQ96DY2 449 aa15.33■□□□□ 0.04
CACNA1A-228ENST00000636610 SH3GL2Q99962 352 aa15.33■□□□□ 0.04
CACNA1A-228ENST00000636610 COL5A3P25940 1745 aaPredicted RBP15.32■□□□□ 0.04
CACNA1A-228ENST00000636610 DCDC2CA8MYV0 355 aa15.32■□□□□ 0.04
CACNA1A-228ENST00000636610 E7EVH7 732 aa15.32■□□□□ 0.04
CACNA1A-228ENST00000636610 hCG_1984214I3L0E3 225 aa15.32■□□□□ 0.04
CACNA1A-228ENST00000636610 PALB2Q86YC2 1186 aa15.32■□□□□ 0.04
CACNA1A-228ENST00000636610 ZNF713Q8N859 430 aaPredicted RBP15.32■□□□□ 0.04
CACNA1A-228ENST00000636610 GOPCQ9HD26 462 aa15.32■□□□□ 0.04
CACNA1A-228ENST00000636610 ZBTB21Q9ULJ3 1066 aa15.32■□□□□ 0.04
CACNA1A-228ENST00000636610 PCDHGC5Q9Y5F6 944 aa15.32■□□□□ 0.04
CACNA1A-228ENST00000636610 RBAK-RBAKDNI3L0D1 243 aa15.32■□□□□ 0.04
CACNA1A-228ENST00000636610 TRIM37O94972 964 aa15.32■□□□□ 0.04
CACNA1A-228ENST00000636610 GH2P01242 217 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms