RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 KLC3Q6P597 504 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 ELP3Q9H9T3 547 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 ABCC4O15439 1325 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 LRRC74AQ0VAA2 488 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 DACH2Q96NX9 599 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 H0YCG3 227 aa19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 C8orf34Q49A92 452 aa19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 COBLL1Q53SF7 1204 aa19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 RASSF3Q86WH2 238 aa19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 DPF3Q92784 378 aa19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 ULK4Q96C45 1275 aa19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 ARMCX2Q7L311 632 aa19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 SEC31AO94979 1220 aaKnown RBP19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 PRR23CQ6ZRP0 262 aa19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 CCDC84Q86UT8 332 aaPredicted RBP19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 ZBTB40Q9NUA8 1239 aa19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 PCSK1NQ9UHG2 260 aa19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 NPM3O75607 178 aaKnown RBP19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 GH2P01242 217 aa19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 KCNJ6P48051 423 aa19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 ARHGAP18Q8N392 663 aa19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 Q9H521 79 aa19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 TSKSQ9UJT2 592 aa19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 EFCAB8A8MWE9 144 aa19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 EPAS1Q99814 870 aa19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 FARP1Q9Y4F1 1045 aaPredicted RBP19.16■□□□□ 0.66
CACNA1A-227ENST00000636549 PMS1P54277 932 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-227ENST00000636549 AARS2Q5JTZ9 985 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-227ENST00000636549 MT-ND3P03897 115 aa19.15■□□□□ 0.66
CACNA1A-227ENST00000636549 TTC7AQ9ULT0 858 aaPredicted RBP19.15■□□□□ 0.66
CACNA1A-227ENST00000636549 ZC3H4Q9UPT8 1303 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-227ENST00000636549 TFRCP02786 760 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-227ENST00000636549 PHLDB3Q6NSJ2 640 aa19.15■□□□□ 0.66
CACNA1A-227ENST00000636549 RMDN1Q96DB5 314 aa19.15■□□□□ 0.66
CACNA1A-227ENST00000636549 LLPHQ9BRT6 129 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-227ENST00000636549 KCNG1Q9UIX4 513 aa19.15■□□□□ 0.66
CACNA1A-227ENST00000636549 K7ERI5 159 aa19.15■□□□□ 0.66
CACNA1A-227ENST00000636549 ZNF568Q3ZCX4 644 aa19.15■□□□□ 0.66
CACNA1A-227ENST00000636549 SEPT12Q8IYM1 358 aa19.15■□□□□ 0.66
CACNA1A-227ENST00000636549 ZBTB7BO15156 539 aaPredicted RBP19.14■□□□□ 0.66
CACNA1A-227ENST00000636549 ACSL3O95573 720 aa19.14■□□□□ 0.66
CACNA1A-227ENST00000636549 GCKP35557 465 aa19.14■□□□□ 0.66
CACNA1A-227ENST00000636549 SLC10A5Q5PT55 438 aa19.14■□□□□ 0.66
CACNA1A-227ENST00000636549 SNRNP48Q6IEG0 339 aaKnown RBP19.14■□□□□ 0.66
CACNA1A-227ENST00000636549 PCDHA5Q9Y5H7 936 aa19.14■□□□□ 0.66
CACNA1A-227ENST00000636549 POLR3AO14802 1390 aaPredicted RBP19.14■□□□□ 0.66
CACNA1A-227ENST00000636549 SPDYE5A6NIY4 337 aa19.14■□□□□ 0.66
CACNA1A-227ENST00000636549 CHEK2O96017 543 aa19.14■□□□□ 0.66
CACNA1A-227ENST00000636549 SPDYE7PQ495Y7 208 aa19.14■□□□□ 0.66
CACNA1A-227ENST00000636549 LARP4BQ92615 738 aaKnown RBP19.14■□□□□ 0.66
CACNA1A-227ENST00000636549 TTC17Q96AE7 1141 aa19.14■□□□□ 0.66
CACNA1A-227ENST00000636549 PIM2Q9P1W9 311 aa19.14■□□□□ 0.66
CACNA1A-227ENST00000636549 CUL7Q14999 1698 aa19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 CAPZA2P47755 286 aa19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 ATG16L1Q676U5 607 aa19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 IL31Q6EBC2 164 aa19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 TRIM58Q8NG06 486 aa19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 EPB41L5Q9HCM4 733 aa19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 PWP1Q13610 501 aa19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 EXOC8Q8IYI6 725 aa19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 TTLL6Q8N841 843 aa19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 HSPA4LO95757 839 aa19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 H2AFZP0C0S5 128 aa19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 ZNF157P51786 506 aaPredicted RBP19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 NBPF20Q3BBV1 942 aa19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 MFSD14CQ5VZR4 134 aa19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 NBPF10Q6P3W6 841 aaKnown RBP19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 H2AFVQ71UI9 128 aa19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 ERICH1Q86X53 443 aa19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 OR8K1Q8NGG5 319 aa19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 STRIP2Q9ULQ0 834 aa19.14■□□□□ 0.65
CACNA1A-227ENST00000636549 LCORLQ8N3X6 602 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 ZBTB1Q9Y2K1 713 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 ZRANB2O95218 330 aaKnown RBP eCLIP19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 CASP14P31944 242 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 RBL2Q08999 1139 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 SH3RF3Q8TEJ3 882 aaPredicted RBP19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 TRPV6Q9H1D0 765 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 VPS11Q9H270 941 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 SPTLC3Q9NUV7 552 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 PCDHA4Q9UN74 947 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 DDIASQ8IXT1 998 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 USP33Q8TEY7 942 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 FAM213AQ9BRX8 229 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 MLXIPLQ9NP71 852 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 SKAP2O75563 359 aaPredicted RBP19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 MDH1BQ5I0G3 518 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 SPATA33Q96N06 139 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 ADAM33Q9BZ11 813 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 PNMA3Q9UL41 463 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 DIAPH2O60879 1101 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 NLRP11P59045 1033 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 SEPT5Q99719 369 aaPredicted RBP19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 MED23Q9ULK4 1368 aa19.13■□□□□ 0.65
CACNA1A-227ENST00000636549 HIP1RO75146 1068 aa19.12■□□□□ 0.65
CACNA1A-227ENST00000636549 SPAG7O75391 227 aa19.12■□□□□ 0.65
CACNA1A-227ENST00000636549 CAPS2Q9BXY5 557 aa19.12■□□□□ 0.65
CACNA1A-227ENST00000636549 LRRC53A6NM62 1247 aa19.12■□□□□ 0.65
CACNA1A-227ENST00000636549 CC2D2BQ6DHV5 1058 aa19.12■□□□□ 0.65
CACNA1A-227ENST00000636549 TRAF3IP3Q9Y228 551 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms