RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 TPCN1Q9ULQ1 816 aa20.87■□□□□ 0.93
CLN6-214ENST00000636314 INSL6Q9Y581 213 aa20.87■□□□□ 0.93
CLN6-214ENST00000636314 IPO5O00410 1097 aaKnown RBP20.86■□□□□ 0.93
CLN6-214ENST00000636314 GPR37L1O60883 481 aa20.86■□□□□ 0.93
CLN6-214ENST00000636314 KCNA5P22460 613 aa20.86■□□□□ 0.93
CLN6-214ENST00000636314 AK2P54819 239 aa20.86■□□□□ 0.93
CLN6-214ENST00000636314 DBF4BQ8NFT6 615 aa20.86■□□□□ 0.93
CLN6-214ENST00000636314 PCYT2Q99447 389 aa20.86■□□□□ 0.93
CLN6-214ENST00000636314 ZNF577Q9BSK1 485 aa20.86■□□□□ 0.93
CLN6-214ENST00000636314 C11orf16Q9NQ32 467 aa20.86■□□□□ 0.93
CLN6-214ENST00000636314 TCEAL9Q9UHQ7 104 aa20.86■□□□□ 0.93
CLN6-214ENST00000636314 TUBE1Q9UJT0 475 aa20.86■□□□□ 0.93
CLN6-214ENST00000636314 PCDHA4Q9UN74 947 aa20.86■□□□□ 0.93
CLN6-214ENST00000636314 TRPC6Q9Y210 931 aa20.86■□□□□ 0.93
CLN6-214ENST00000636314 ARIH1Q9Y4X5 557 aaPredicted RBP20.86■□□□□ 0.93
CLN6-214ENST00000636314 STK36Q9NRP7 1315 aa20.85■□□□□ 0.93
CLN6-214ENST00000636314 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.85■□□□□ 0.93
CLN6-214ENST00000636314 PFKFB2O60825 505 aa20.85■□□□□ 0.93
CLN6-214ENST00000636314 LEXMQ3ZCV2 418 aa20.85■□□□□ 0.93
CLN6-214ENST00000636314 PRR16Q569H4 304 aa20.85■□□□□ 0.93
CLN6-214ENST00000636314 TAF2Q6P1X5 1199 aa20.85■□□□□ 0.93
CLN6-214ENST00000636314 FAM177A1Q8N128 213 aaPredicted RBP20.85■□□□□ 0.93
CLN6-214ENST00000636314 TNPO1Q92973 898 aaKnown RBP20.85■□□□□ 0.93
CLN6-214ENST00000636314 IL17RAQ96F46 866 aa20.85■□□□□ 0.93
CLN6-214ENST00000636314 C22orf23Q9BZE7 217 aa20.85■□□□□ 0.93
CLN6-214ENST00000636314 RALGAPA2Q2PPJ7 1873 aa20.84■□□□□ 0.93
CLN6-214ENST00000636314 PI4K2BG5E9Z4 385 aa20.84■□□□□ 0.93
CLN6-214ENST00000636314 CCNE2O96020 404 aa20.84■□□□□ 0.93
CLN6-214ENST00000636314 CIITAP33076 1130 aa20.84■□□□□ 0.93
CLN6-214ENST00000636314 STAT5BP51692 787 aa20.84■□□□□ 0.93
CLN6-214ENST00000636314 IGBP1P78318 339 aa20.84■□□□□ 0.93
CLN6-214ENST00000636314 PLPPR4Q7Z2D5 763 aa20.84■□□□□ 0.93
CLN6-214ENST00000636314 BLIDQ8IZY5 108 aa20.84■□□□□ 0.93
CLN6-214ENST00000636314 AIFM3Q96NN9 605 aa20.84■□□□□ 0.93
CLN6-214ENST00000636314 UIMC1Q96RL1 719 aa20.84■□□□□ 0.93
CLN6-214ENST00000636314 TBC1D22BQ9NU19 505 aa20.84■□□□□ 0.93
CLN6-214ENST00000636314 BACH1O14867 736 aa20.83■□□□□ 0.93
CLN6-214ENST00000636314 ATG7O95352 703 aa20.83■□□□□ 0.93
CLN6-214ENST00000636314 SEC24BO95487 1268 aa20.83■□□□□ 0.93
CLN6-214ENST00000636314 SSTR3P32745 418 aaPredicted RBP20.83■□□□□ 0.93
CLN6-214ENST00000636314 SLC26A2P50443 739 aa20.83■□□□□ 0.93
CLN6-214ENST00000636314 FAM160B1Q5W0V3 765 aa20.83■□□□□ 0.93
CLN6-214ENST00000636314 GALNT17Q6IS24 598 aa20.83■□□□□ 0.93
CLN6-214ENST00000636314 MIS18BP1Q6P0N0 1132 aa20.83■□□□□ 0.93
CLN6-214ENST00000636314 RUFY4Q6ZNE9 571 aa20.83■□□□□ 0.93
CLN6-214ENST00000636314 RSPH3Q86UC2 560 aa20.83■□□□□ 0.93
CLN6-214ENST00000636314 DAGLBQ8NCG7 672 aa20.83■□□□□ 0.93
CLN6-214ENST00000636314 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.83■□□□□ 0.93
CLN6-214ENST00000636314 MBLAC1A4D2B0 266 aaPredicted RBP20.82■□□□□ 0.92
CLN6-214ENST00000636314 RRN3P2A6NIE6 340 aa20.82■□□□□ 0.92
CLN6-214ENST00000636314 DHX15O43143 795 aaKnown RBP20.82■□□□□ 0.92
CLN6-214ENST00000636314 INSRRP14616 1297 aa20.82■□□□□ 0.92
CLN6-214ENST00000636314 IL9P15248 144 aa20.82■□□□□ 0.92
CLN6-214ENST00000636314 XBP1P17861 261 aa20.82■□□□□ 0.92
CLN6-214ENST00000636314 USP11P51784 963 aa20.82■□□□□ 0.92
CLN6-214ENST00000636314 PLCB4Q15147 1175 aa20.82■□□□□ 0.92
CLN6-214ENST00000636314 PTPROQ16827 1216 aa20.82■□□□□ 0.92
CLN6-214ENST00000636314 PTCRAQ6ISU1 281 aaPredicted RBP20.82■□□□□ 0.92
CLN6-214ENST00000636314 ABHD15Q6UXT9 468 aa20.82■□□□□ 0.92
CLN6-214ENST00000636314 FAM178BQ8IXR5 827 aa20.82■□□□□ 0.92
CLN6-214ENST00000636314 GJD3Q8N144 294 aa20.82■□□□□ 0.92
CLN6-214ENST00000636314 TBCKQ8TEA7 893 aa20.82■□□□□ 0.92
CLN6-214ENST00000636314 MYH9P35579 1960 aaKnown RBP20.82■□□□□ 0.92
CLN6-214ENST00000636314 ATG2AQ2TAZ0 1938 aa20.81■□□□□ 0.92
CLN6-214ENST00000636314 IGKV6D-21A0A0A0MT36 114 aa20.81■□□□□ 0.92
CLN6-214ENST00000636314 POTEB3A0JP26 581 aa20.81■□□□□ 0.92
CLN6-214ENST00000636314 UPP2O95045 317 aa20.81■□□□□ 0.92
CLN6-214ENST00000636314 NEK4P51957 841 aa20.81■□□□□ 0.92
CLN6-214ENST00000636314 HTRA4P83105 476 aaPredicted RBP20.81■□□□□ 0.92
CLN6-214ENST00000636314 KRT76Q01546 638 aa20.81■□□□□ 0.92
CLN6-214ENST00000636314 EPC2Q52LR7 807 aa20.81■□□□□ 0.92
CLN6-214ENST00000636314 PLEKHG4Q58EX7 1191 aa20.81■□□□□ 0.92
CLN6-214ENST00000636314 MARCH8Q5T0T0 291 aa20.81■□□□□ 0.92
CLN6-214ENST00000636314 ZNF746Q6NUN9 644 aaPredicted RBP20.81■□□□□ 0.92
CLN6-214ENST00000636314 POTEBQ6S5H4 581 aa20.81■□□□□ 0.92
CLN6-214ENST00000636314 RPAINQ86UA6 219 aa20.81■□□□□ 0.92
CLN6-214ENST00000636314 CCDC60Q8IWA6 550 aaPredicted RBP20.81■□□□□ 0.92
CLN6-214ENST00000636314 SEPT8Q92599 483 aa20.81■□□□□ 0.92
CLN6-214ENST00000636314 LENG9Q96B70 501 aa20.81■□□□□ 0.92
CLN6-214ENST00000636314 MRPL38Q96DV4 380 aaKnown RBP20.81■□□□□ 0.92
CLN6-214ENST00000636314 YME1L1Q96TA2 773 aa20.81■□□□□ 0.92
CLN6-214ENST00000636314 ZNF302Q9NR11 478 aa20.81■□□□□ 0.92
CLN6-214ENST00000636314 KCNJ14Q9UNX9 436 aa20.81■□□□□ 0.92
CLN6-214ENST00000636314 RPLP2P05387 115 aaKnown RBP20.8■□□□□ 0.92
CLN6-214ENST00000636314 MKRN4PQ13434 485 aaPredicted RBP20.8■□□□□ 0.92
CLN6-214ENST00000636314 NPY5RQ15761 445 aa20.8■□□□□ 0.92
CLN6-214ENST00000636314 FAM26DQ5JW98 314 aa20.8■□□□□ 0.92
CLN6-214ENST00000636314 PDXDC2PQ6P474 469 aa20.8■□□□□ 0.92
CLN6-214ENST00000636314 EP400NLQ6ZTU2 488 aa20.8■□□□□ 0.92
CLN6-214ENST00000636314 SMAP1Q8IYB5 467 aaPredicted RBP20.8■□□□□ 0.92
CLN6-214ENST00000636314 SP7Q8TDD2 431 aaPredicted RBP20.8■□□□□ 0.92
CLN6-214ENST00000636314 SAMD11Q96NU1 681 aa20.8■□□□□ 0.92
CLN6-214ENST00000636314 WDR81Q562E7 1941 aa20.8■□□□□ 0.92
CLN6-214ENST00000636314 M0R2N6 131 aa20.79■□□□□ 0.92
CLN6-214ENST00000636314 LARGE1O95461 756 aa20.79■□□□□ 0.92
CLN6-214ENST00000636314 GPM6BQ13491 265 aa20.79■□□□□ 0.92
CLN6-214ENST00000636314 NONOQ15233 471 aaKnown RBP eCLIP20.79■□□□□ 0.928e-7■■■□□ 15.9
CLN6-214ENST00000636314 ME3Q16798 604 aa20.79■□□□□ 0.92
CLN6-214ENST00000636314 TIGD5Q53EQ6 642 aa20.79■□□□□ 0.92
CLN6-214ENST00000636314 KRT25Q7Z3Z0 450 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms