RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 C2CD2LO14523 706 aa17.31■□□□□ 0.36
CLN5-208ENST00000636183 PAMP19021 973 aa17.31■□□□□ 0.36
CLN5-208ENST00000636183 PI16Q6UXB8 463 aa17.31■□□□□ 0.36
CLN5-208ENST00000636183 XPO4Q9C0E2 1151 aaKnown RBP17.31■□□□□ 0.36
CLN5-208ENST00000636183 RAD18Q9NS91 495 aa17.31■□□□□ 0.36
CLN5-208ENST00000636183 MSH2P43246 934 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 SLMAPQ14BN4 828 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 KIF19Q2TAC6 998 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 FAM167AQ96KS9 214 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 KLHL8Q9P2G9 620 aaPredicted RBP17.3■□□□□ 0.36
CLN5-208ENST00000636183 ZFYVE16Q7Z3T8 1539 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 HMBSP08397 361 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 PLA2G4BP0C869 781 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.3■□□□□ 0.36
CLN5-208ENST00000636183 LCA5Q86VQ0 697 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 PASD1Q8IV76 773 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 OTULINQ96BN8 352 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 SENP1Q9P0U3 644 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 ANP32DO95626 131 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 SYF2O95926 243 aaKnown RBP17.3■□□□□ 0.36
CLN5-208ENST00000636183 IGFBP4P22692 258 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 MXI1P50539 228 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 SWSAP1Q6NVH7 229 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 NPM3O75607 178 aaKnown RBP17.3■□□□□ 0.36
CLN5-208ENST00000636183 RPS6KA4O75676 772 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 ABHD8Q96I13 439 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 SIK2Q9H0K1 926 aa17.3■□□□□ 0.36
CLN5-208ENST00000636183 GCFC2P16383 781 aaKnown RBP17.29■□□□□ 0.36
CLN5-208ENST00000636183 JAK3P52333 1124 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 ZNF699Q32M78 642 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 TBC1D9BQ66K14 1250 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 MICALL2Q8IY33 904 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 DHX38Q92620 1227 aaKnown RBP17.29■□□□□ 0.36
CLN5-208ENST00000636183 TEKT2Q9UIF3 430 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 MAP3K1Q13233 1512 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 MUM1Q2TAK8 710 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 PKNOX2Q96KN3 472 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 RAD51Q06609 339 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 TMED2Q15363 201 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 SMYD4Q8IYR2 804 aaPredicted RBP17.29■□□□□ 0.36
CLN5-208ENST00000636183 IMPACTQ9P2X3 320 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 CDC25AP30304 524 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 OCRLQ01968 901 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 GOLGA8QA0A0J9YX86 632 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 GOLGA8OA6NCC3 632 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 GOLGA8NF8WBI6 632 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 NSUN6Q8TEA1 469 aaKnown RBP17.29■□□□□ 0.36
CLN5-208ENST00000636183 HOMER3Q9NSC5 361 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 TLR7Q9NYK1 1049 aaKnown RBP17.29■□□□□ 0.36
CLN5-208ENST00000636183 PCDHA6Q9UN73 950 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 PCDHA8Q9Y5H6 950 aa17.29■□□□□ 0.36
CLN5-208ENST00000636183 FAM133AQ8N9E0 248 aa17.28■□□□□ 0.36
CLN5-208ENST00000636183 NCLNQ969V3 563 aa17.28■□□□□ 0.36
CLN5-208ENST00000636183 ANTXR1Q9H6X2 564 aa17.28■□□□□ 0.36
CLN5-208ENST00000636183 RALAP11233 206 aa17.28■□□□□ 0.36
CLN5-208ENST00000636183 EGFL8Q99944 293 aa17.28■□□□□ 0.36
CLN5-208ENST00000636183 SEPT2Q15019 361 aa17.28■□□□□ 0.36
CLN5-208ENST00000636183 SMAD1Q15797 465 aaKnown RBP17.28■□□□□ 0.36
CLN5-208ENST00000636183 RPAP3Q9H6T3 665 aaPredicted RBP17.28■□□□□ 0.36
CLN5-208ENST00000636183 XAB2Q9HCS7 855 aaKnown RBP17.28■□□□□ 0.36
CLN5-208ENST00000636183 FAM81BQ96LP2 452 aa17.28■□□□□ 0.36
CLN5-208ENST00000636183 DONSONQ9NYP3 566 aa17.28■□□□□ 0.36
CLN5-208ENST00000636183 PIN4Q9Y237 131 aaKnown RBP17.28■□□□□ 0.36
CLN5-208ENST00000636183 AGRPO00253 132 aa17.28■□□□□ 0.36
CLN5-208ENST00000636183 LAD1O00515 517 aa17.28■□□□□ 0.36
CLN5-208ENST00000636183 INPP5BP32019 993 aa17.28■□□□□ 0.36
CLN5-208ENST00000636183 RAB42Q8N4Z0 105 aa17.28■□□□□ 0.36
CLN5-208ENST00000636183 MFSD1Q9H3U5 465 aa17.28■□□□□ 0.36
CLN5-208ENST00000636183 GLE1Q53GS7 698 aaKnown RBP17.28■□□□□ 0.36
CLN5-208ENST00000636183 ARMC6Q6NXE6 501 aa17.28■□□□□ 0.36
CLN5-208ENST00000636183 ULK4Q96C45 1275 aa17.28■□□□□ 0.36
CLN5-208ENST00000636183 USP28Q96RU2 1077 aa17.28■□□□□ 0.36
CLN5-208ENST00000636183 TUBGCP2Q9BSJ2 902 aa17.28■□□□□ 0.36
CLN5-208ENST00000636183 BSDC1Q9NW68 430 aaPredicted RBP17.28■□□□□ 0.36
CLN5-208ENST00000636183 ATP1A2P50993 1020 aa17.27■□□□□ 0.36
CLN5-208ENST00000636183 HMGCS2P54868 508 aa17.27■□□□□ 0.36
CLN5-208ENST00000636183 C10orf76Q5T2E6 689 aa17.27■□□□□ 0.36
CLN5-208ENST00000636183 PRAMEF18Q5VWM3 479 aa17.27■□□□□ 0.36
CLN5-208ENST00000636183 CNOT7Q9UIV1 285 aaKnown RBP17.27■□□□□ 0.36
CLN5-208ENST00000636183 UGGT2Q9NYU1 1516 aa17.27■□□□□ 0.36
CLN5-208ENST00000636183 CCDC85CA6NKD9 419 aa17.27■□□□□ 0.36
CLN5-208ENST00000636183 CIAO1O76071 339 aa17.27■□□□□ 0.36
CLN5-208ENST00000636183 TMCC1O94876 653 aa17.27■□□□□ 0.36
CLN5-208ENST00000636183 ATXN3P54252 364 aaPredicted RBP17.27■□□□□ 0.36
CLN5-208ENST00000636183 TXNRD1Q16881 649 aa17.27■□□□□ 0.36
CLN5-208ENST00000636183 CCDC38Q502W7 563 aa17.27■□□□□ 0.36
CLN5-208ENST00000636183 USP44Q9H0E7 712 aa17.27■□□□□ 0.36
CLN5-208ENST00000636183 ABCC4O15439 1325 aa17.27■□□□□ 0.36
CLN5-208ENST00000636183 DYNC1LI2O43237 492 aaPredicted RBP17.27■□□□□ 0.36
CLN5-208ENST00000636183 LDHAP00338 332 aaKnown RBP17.27■□□□□ 0.36
CLN5-208ENST00000636183 GTF2H3Q13889 308 aa17.27■□□□□ 0.36
CLN5-208ENST00000636183 TMEM259Q4ZIN3 620 aa17.27■□□□□ 0.36
CLN5-208ENST00000636183 NCF2P19878 526 aaPredicted RBP17.27■□□□□ 0.35
CLN5-208ENST00000636183 ATN1P54259 1190 aaPredicted RBP17.27■□□□□ 0.35
CLN5-208ENST00000636183 SPATA2LQ8IUW3 424 aaPredicted RBP17.27■□□□□ 0.35
CLN5-208ENST00000636183 FAF2Q96CS3 445 aa17.27■□□□□ 0.35
CLN5-208ENST00000636183 H3BRJ5 948 aa17.27■□□□□ 0.35
CLN5-208ENST00000636183 HSPA6P17066 643 aa17.27■□□□□ 0.35
CLN5-208ENST00000636183 ADD2P35612 726 aa17.27■□□□□ 0.35
CLN5-208ENST00000636183 TAF11Q15544 211 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms