RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 SLC18B1Q6NT16 456 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 CCDC62Q6P9F0 684 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 MRPL10Q7Z7H8 261 aaKnown RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 TMEM135Q86UB9 458 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 NAXDQ8IW45 347 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 MUC20Q8N307 709 aaPredicted RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 KLHL36Q8N4N3 616 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF441Q8N8Z8 693 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 SPIRE2Q8WWL2 714 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 LINC01599Q8WXQ3 324 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 LINC00476Q8WZB0 136 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 LPPQ93052 612 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 ARMC5Q96C12 935 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 NEIL1Q96FI4 390 aaPredicted RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF479Q96JC4 524 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 YTHDC1Q96MU7 727 aaKnown RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF599Q96NL3 588 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 NODALQ96S42 347 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 C11orf84Q9BUA3 381 aaPredicted RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 TRMT61BQ9BVS5 477 aaKnown RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 CARD11Q9BXL7 1154 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 WDR11Q9BZH6 1224 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 SEMA4CQ9C0C4 833 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF700Q9H0M5 742 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 IL25Q9H293 177 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 AGO3Q9H9G7 860 aaKnown RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 L2HGDHQ9H9P8 463 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 BARX1Q9HBU1 254 aaPredicted RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 TNFRSF12AQ9NP84 129 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 TCF7L2Q9NQB0 619 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 SNRKQ9NRH2 765 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 RBM12Q9NTZ6 932 aaKnown RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 ASB6Q9NWX5 421 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 CABP1Q9NZU7 370 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 PAK5Q9P286 719 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 ANKIB1Q9P2G1 1089 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 PCOLCE2Q9UKZ9 415 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 NOD1Q9Y239 953 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 PARP3Q9Y6F1 533 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 PRSS21Q9Y6M0 314 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 SQORQ9Y6N5 450 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 CAPN6Q9Y6Q1 641 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 PRRC2BQ5JSZ5 2229 aaKnown RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 COL1A1P02452 1464 aaPredicted RBP-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 ZFYVE26Q68DK2 2539 aa-0.63□□□□□ -2.51
CDKL5-210ENST00000636046 TEP1Q99973 2627 aaKnown RBP-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 CENPVL1A0A0U1RR11 272 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 KCNU1A8MYU2 1149 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 EPM2AB3EWF7 344 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 B9A039 149 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 STK25O00506 426 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 MGST3O14880 152 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 SNAI2O43623 268 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 CDC14BO60729 498 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 LRP3O75074 770 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 SASH3O75995 380 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 SCAF4O95104 1147 aaKnown RBP-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 ESRRBO95718 433 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 IGLV2-11P01706 119 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 PSAPP07602 524 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 HOXC4P09017 264 aaPredicted RBP-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 TMEM191BP0C7N4 346 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 CFC1BP0CG36 223 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 CFC1P0CG37 223 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF28P17035 718 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 CR2P20023 1033 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 FGFR4P22455 802 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 GPTP24298 496 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 TPP2P29144 1249 aaPredicted RBP-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 MPGP29372 298 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 PMLP29590 882 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 RARRES1P49788 294 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 SCNN1GP51170 649 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 SLC8A3P57103 927 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 ERVFC1-1P60608 527 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 RAC3P60763 192 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 SIM1P81133 766 aaPredicted RBP-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 CYP4F8P98187 520 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 ATP11AP98196 1134 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 PSG6Q00889 435 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 PMP22Q01453 160 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 FOXL1Q12952 345 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 MFSD10Q14728 455 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 SF3A2Q15428 464 aaKnown RBP-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 TAF1CQ15572 869 aaPredicted RBP-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF718Q3SXZ3 478 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 SUPT20HL1Q3ZLR7 823 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 RNF212Q495C1 297 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 KIAA1755Q5JYT7 1200 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 PRR31Q5SQ13 230 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 HP1BP3Q5SSJ5 553 aaPredicted RBP-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 SFRP5Q5T4F7 317 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 RHBDD2Q6NTF9 364 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 PDXDC2PQ6P474 469 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 CEP128Q6ZU80 1094 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 C22orf34Q6ZV56 151 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 TMPRSS9Q7Z410 1059 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 VN1R5Q7Z5H4 357 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 RALYLQ86SE5 291 aaKnown RBP-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms