RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 B4GALT4O60513 344 aa9.57□□□□□ -0.88
CDKL5-209ENST00000635828 HOXD8P13378 290 aaPredicted RBP9.57□□□□□ -0.88
CDKL5-209ENST00000635828 FXR2P51116 673 aaKnown RBP eCLIP9.57□□□□□ -0.88
CDKL5-209ENST00000635828 GRB10Q13322 594 aa9.57□□□□□ -0.88
CDKL5-209ENST00000635828 ITGA7Q13683 1181 aa9.57□□□□□ -0.88
CDKL5-209ENST00000635828 MFSD10Q14728 455 aa9.57□□□□□ -0.88
CDKL5-209ENST00000635828 TRIM60Q495X7 471 aa9.57□□□□□ -0.88
CDKL5-209ENST00000635828 RUFY4Q6ZNE9 571 aa9.57□□□□□ -0.88
CDKL5-209ENST00000635828 GRAMD1CQ8IYS0 662 aa9.57□□□□□ -0.88
CDKL5-209ENST00000635828 SNX29Q8TEQ0 813 aa9.57□□□□□ -0.88
CDKL5-209ENST00000635828 STARD7Q9NQZ5 370 aa9.57□□□□□ -0.88
CDKL5-209ENST00000635828 DDX19AQ9NUU7 478 aaKnown RBP9.57□□□□□ -0.88
CDKL5-209ENST00000635828 RCOR1Q9UKL0 485 aa9.57□□□□□ -0.88
CDKL5-209ENST00000635828 SRPRBQ9Y5M8 271 aaKnown RBP9.57□□□□□ -0.88
CDKL5-209ENST00000635828 TBX3O15119 743 aa9.57□□□□□ -0.88
CDKL5-209ENST00000635828 NKRFO15226 690 aaKnown RBP eCLIP9.57□□□□□ -0.88
CDKL5-209ENST00000635828 MSCO60682 206 aa9.57□□□□□ -0.88
CDKL5-209ENST00000635828 INSRRP14616 1297 aa9.57□□□□□ -0.88
CDKL5-209ENST00000635828 KRT76Q01546 638 aa9.57□□□□□ -0.88
CDKL5-209ENST00000635828 Q9Y3F1 56 aa9.57□□□□□ -0.88
CDKL5-209ENST00000635828 ARID2Q68CP9 1835 aa9.57□□□□□ -0.88
CDKL5-209ENST00000635828 IGSF9BQ9UPX0 1349 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 CSDE1O75534 798 aaKnown RBP9.56□□□□□ -0.88
CDKL5-209ENST00000635828 SMIM10L2AP0DMW4 78 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 SMIM10L2BP0DMW5 78 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 CST5P28325 142 aaPredicted RBP9.56□□□□□ -0.88
CDKL5-209ENST00000635828 PSEN2P49810 448 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 KRT85P78386 507 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 LRRC71Q8N4P6 559 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 LMBR1Q8WVP7 490 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 SCN5AQ14524 2016 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 KBTBD13C9JR72 458 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 HAS3O00219 553 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 LGR5O75473 907 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 SYN1P17600 705 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 CCT6AP40227 531 aaKnown RBP9.56□□□□□ -0.88
CDKL5-209ENST00000635828 MTERF2Q49AM1 385 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 NAALADL2Q58DX5 795 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 SLC39A5Q6ZMH5 540 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 KSR1Q8IVT5 923 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 TEX2Q8IWB9 1127 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 SPC25Q9HBM1 224 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 GPRC5CQ9NQ84 441 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 SEPT9Q9UHD8 586 aaPredicted RBP9.56□□□□□ -0.88
CDKL5-209ENST00000635828 TRPC6Q9Y210 931 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 TET1Q8NFU7 2136 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 PSAPP07602 524 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 NKX3-2P78367 333 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 MIS18BP1Q6P0N0 1132 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 KRI1Q8N9T8 703 aaKnown RBP9.56□□□□□ -0.88
CDKL5-209ENST00000635828 ZNF396Q96N95 335 aaPredicted RBP9.56□□□□□ -0.88
CDKL5-209ENST00000635828 CEP89Q96ST8 783 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 MTRQ99707 1265 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 TCEAL9Q9UHQ7 104 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 PHF24Q9UPV7 400 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 ATP11BQ9Y2G3 1177 aa9.56□□□□□ -0.88
CDKL5-209ENST00000635828 PDE4DIPQ5VU43 2346 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 PRPF40AO75400 957 aaKnown RBP9.55□□□□□ -0.88
CDKL5-209ENST00000635828 PLCG1P19174 1290 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 NDUFA8P51970 172 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 ARRDC4Q8NCT1 418 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 GLT1D1Q96MS3 346 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 SIP14410 1827 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 DDX11L8A8MPP1 907 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 YWHABP31946 246 aaKnown RBP9.55□□□□□ -0.88
CDKL5-209ENST00000635828 PRPHP41219 470 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 MKRN4PQ13434 485 aaPredicted RBP9.55□□□□□ -0.88
CDKL5-209ENST00000635828 CABP7Q86V35 215 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 SMAP1Q8IYB5 467 aaPredicted RBP9.55□□□□□ -0.88
CDKL5-209ENST00000635828 GIMAP8Q8ND71 665 aaPredicted RBP9.55□□□□□ -0.88
CDKL5-209ENST00000635828 C11orf49Q9H6J7 331 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 AZI2Q9H6S1 392 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 CDHR5Q9HBB8 845 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 BLOC1S4Q9NUP1 217 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 USP20Q9Y2K6 914 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 SFI1A8K8P3 1242 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 YEATS4O95619 227 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 LIG1P18858 919 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 QARSP47897 775 aaKnown RBP9.55□□□□□ -0.88
CDKL5-209ENST00000635828 EPHA7Q15375 998 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 DHX38Q92620 1227 aaKnown RBP9.55□□□□□ -0.88
CDKL5-209ENST00000635828 MTG1Q9BT17 334 aaPredicted RBP9.55□□□□□ -0.88
CDKL5-209ENST00000635828 BHMT2Q9H2M3 363 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 ERAP1Q9NZ08 941 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 CIZ1Q9ULV3 898 aaPredicted RBP9.55□□□□□ -0.88
CDKL5-209ENST00000635828 EMSYQ7Z589 1322 aa9.55□□□□□ -0.88
CDKL5-209ENST00000635828 A0A0C4DFX4 3053 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 P4HBP07237 508 aaKnown RBP9.54□□□□□ -0.88
CDKL5-209ENST00000635828 CLCN3P51790 818 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 ARL6IP4Q66PJ3 421 aaKnown RBP9.54□□□□□ -0.88
CDKL5-209ENST00000635828 PCSK9Q8NBP7 692 aaKnown RBP9.54□□□□□ -0.88
CDKL5-209ENST00000635828 CFAP45Q9UL16 551 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 OATP04181 439 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 RPA1P27694 616 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 TLE2Q04725 743 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 FAAP100Q0VG06 881 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 MCM6Q14566 821 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 GRIK4Q16099 956 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 C7orf31Q8N865 590 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 AFAP1L1Q8TED9 768 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms