RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 CCDC60Q8IWA6 550 aaPredicted RBP20.68■□□□□ 0.9
CLN6-210ENST00000635747 CKAP2LQ8IYA6 745 aa20.68■□□□□ 0.9
CLN6-210ENST00000635747 MYOCDQ8IZQ8 938 aa20.68■□□□□ 0.9
CLN6-210ENST00000635747 USP38Q8NB14 1042 aa20.68■□□□□ 0.9
CLN6-210ENST00000635747 SAMM50Q9Y512 469 aa20.68■□□□□ 0.9
CLN6-210ENST00000635747 MAFBQ9Y5Q3 323 aaPredicted RBP20.68■□□□□ 0.9
CLN6-210ENST00000635747 COL1A2P08123 1366 aa20.68■□□□□ 0.9
CLN6-210ENST00000635747 TRANK1O15050 2925 aa20.67■□□□□ 0.9
CLN6-210ENST00000635747 MSH4O15457 936 aa20.67■□□□□ 0.9
CLN6-210ENST00000635747 GAS7O60861 476 aa20.67■□□□□ 0.9
CLN6-210ENST00000635747 MRPS6P82932 125 aaKnown RBP20.67■□□□□ 0.9
CLN6-210ENST00000635747 MTHFD1LQ6UB35 978 aa20.67■□□□□ 0.9
CLN6-210ENST00000635747 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.67■□□□□ 0.9
CLN6-210ENST00000635747 FAM43BQ6ZT52 329 aaPredicted RBP20.67■□□□□ 0.9
CLN6-210ENST00000635747 BBXQ8WY36 941 aaPredicted RBP20.67■□□□□ 0.9
CLN6-210ENST00000635747 AIFM3Q96NN9 605 aa20.67■□□□□ 0.9
CLN6-210ENST00000635747 PHF20Q9BVI0 1012 aa20.67■□□□□ 0.9
CLN6-210ENST00000635747 ORC3Q9UBD5 711 aaPredicted RBP20.67■□□□□ 0.9
CLN6-210ENST00000635747 CDY2AQ9Y6F7 541 aa20.67■□□□□ 0.9
CLN6-210ENST00000635747 MYO9BQ13459 2157 aa20.66■□□□□ 0.9
CLN6-210ENST00000635747 EDIL3O43854 480 aa20.66■□□□□ 0.9
CLN6-210ENST00000635747 GHRP10912 638 aa20.66■□□□□ 0.9
CLN6-210ENST00000635747 KLRC1P26715 233 aa20.66■□□□□ 0.9
CLN6-210ENST00000635747 SFNP31947 248 aa20.66■□□□□ 0.9
CLN6-210ENST00000635747 ADGRE1Q14246 886 aa20.66■□□□□ 0.9
CLN6-210ENST00000635747 NPY5RQ15761 445 aa20.66■□□□□ 0.9
CLN6-210ENST00000635747 TSHZ1Q6ZSZ6 1077 aa20.66■□□□□ 0.9
CLN6-210ENST00000635747 SLC5A5Q92911 643 aa20.66■□□□□ 0.9
CLN6-210ENST00000635747 TOP1MTQ969P6 601 aa20.66■□□□□ 0.9
CLN6-210ENST00000635747 FAM167AQ96KS9 214 aa20.66■□□□□ 0.9
CLN6-210ENST00000635747 UIMC1Q96RL1 719 aa20.66■□□□□ 0.9
CLN6-210ENST00000635747 TEKT3Q9BXF9 490 aa20.66■□□□□ 0.9
CLN6-210ENST00000635747 FAM49AQ9H0Q0 323 aaPredicted RBP20.66■□□□□ 0.9
CLN6-210ENST00000635747 DISC1Q9NRI5 854 aa20.66■□□□□ 0.9
CLN6-210ENST00000635747 CEP131Q9UPN4 1083 aa20.66■□□□□ 0.9
CLN6-210ENST00000635747 GBF1Q92538 1859 aa20.66■□□□□ 0.9
CLN6-210ENST00000635747 CCDC194A0A1B0GVG4 234 aa20.65■□□□□ 0.9
CLN6-210ENST00000635747 GTPBP6O43824 516 aaPredicted RBP20.65■□□□□ 0.9
CLN6-210ENST00000635747 POU3F3P20264 500 aaPredicted RBP20.65■□□□□ 0.9
CLN6-210ENST00000635747 JAK3P52333 1124 aa20.65■□□□□ 0.9
CLN6-210ENST00000635747 LPIN1Q14693 890 aa20.65■□□□□ 0.9
CLN6-210ENST00000635747 FBXO47Q5MNV8 452 aa20.65■□□□□ 0.9
CLN6-210ENST00000635747 LRCH2Q5VUJ6 765 aa20.65■□□□□ 0.9
CLN6-210ENST00000635747 TMCO2Q7Z6W1 182 aaPredicted RBP20.65■□□□□ 0.9
CLN6-210ENST00000635747 RDM1Q8NG50 284 aa20.65■□□□□ 0.9
CLN6-210ENST00000635747 TRAPPC12Q8WVT3 735 aa20.65■□□□□ 0.9
CLN6-210ENST00000635747 ARNTL2Q8WYA1 636 aa20.65■□□□□ 0.9
CLN6-210ENST00000635747 NAP1L4Q99733 375 aaKnown RBP20.65■□□□□ 0.9
CLN6-210ENST00000635747 KCNJ14Q9UNX9 436 aa20.65■□□□□ 0.9
CLN6-210ENST00000635747 TRPV2Q9Y5S1 764 aa20.65■□□□□ 0.9
CLN6-210ENST00000635747 SEC24BO95487 1268 aa20.64■□□□□ 0.89
CLN6-210ENST00000635747 HTRA4P83105 476 aaPredicted RBP20.64■□□□□ 0.89
CLN6-210ENST00000635747 ME3Q16798 604 aa20.64■□□□□ 0.89
CLN6-210ENST00000635747 GTF3C6Q969F1 213 aa20.64■□□□□ 0.89
CLN6-210ENST00000635747 MBOAT7Q96N66 472 aa20.64■□□□□ 0.89
CLN6-210ENST00000635747 TGS1Q96RS0 853 aaKnown RBP20.64■□□□□ 0.89
CLN6-210ENST00000635747 FTHL17Q9BXU8 183 aa20.64■□□□□ 0.89
CLN6-210ENST00000635747 OSBPL7Q9BZF2 842 aa20.64■□□□□ 0.89
CLN6-210ENST00000635747 BRMS1Q9HCU9 246 aa20.64■□□□□ 0.89
CLN6-210ENST00000635747 NRBP2Q9NSY0 501 aa20.64■□□□□ 0.89
CLN6-210ENST00000635747 GABBR1Q9UBS5 961 aa20.64■□□□□ 0.89
CLN6-210ENST00000635747 KDM3AQ9Y4C1 1321 aa20.63■□□□□ 0.89
CLN6-210ENST00000635747 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.63■□□□□ 0.89
CLN6-210ENST00000635747 LCHNA4D1U4 455 aa20.63■□□□□ 0.89
CLN6-210ENST00000635747 PSMD10O75832 226 aa20.63■□□□□ 0.89
CLN6-210ENST00000635747 CTDNEP1O95476 244 aa20.63■□□□□ 0.89
CLN6-210ENST00000635747 GCFC2P16383 781 aaKnown RBP20.63■□□□□ 0.89
CLN6-210ENST00000635747 ATP4AP20648 1035 aa20.63■□□□□ 0.89
CLN6-210ENST00000635747 FAM117BQ6P1L5 589 aa20.63■□□□□ 0.89
CLN6-210ENST00000635747 CELF4Q9BZC1 486 aaKnown RBP20.63■□□□□ 0.89
CLN6-210ENST00000635747 CERS4Q9HA82 394 aa20.63■□□□□ 0.89
CLN6-210ENST00000635747 MAGEB2O15479 319 aa20.62■□□□□ 0.89
CLN6-210ENST00000635747 ARHGEF15O94989 841 aa20.62■□□□□ 0.89
CLN6-210ENST00000635747 ERVK-21P61565 698 aa20.62■□□□□ 0.89
CLN6-210ENST00000635747 INF2Q27J81 1249 aa20.62■□□□□ 0.89
CLN6-210ENST00000635747 ODR4Q5SWX8 454 aa20.62■□□□□ 0.89
CLN6-210ENST00000635747 PPP4R3AQ6IN85 833 aa20.62■□□□□ 0.89
CLN6-210ENST00000635747 NEK8Q86SG6 692 aa20.62■□□□□ 0.89
CLN6-210ENST00000635747 ZNF710Q8N1W2 664 aa20.62■□□□□ 0.89
CLN6-210ENST00000635747 NECAB1Q8N987 351 aa20.62■□□□□ 0.89
CLN6-210ENST00000635747 ZBTB10Q96DT7 871 aa20.62■□□□□ 0.89
CLN6-210ENST00000635747 YME1L1Q96TA2 773 aa20.62■□□□□ 0.89
CLN6-210ENST00000635747 TSPYL2Q9H2G4 693 aaPredicted RBP20.62■□□□□ 0.89
CLN6-210ENST00000635747 DDX25Q9UHL0 483 aaKnown RBP20.62■□□□□ 0.89
CLN6-210ENST00000635747 IGSF9BQ9UPX0 1349 aa20.61■□□□□ 0.89
CLN6-210ENST00000635747 LINC01553A4QN01 128 aa20.61■□□□□ 0.89
CLN6-210ENST00000635747 DLL1O00548 723 aa20.61■□□□□ 0.89
CLN6-210ENST00000635747 UPP2O95045 317 aa20.61■□□□□ 0.89
CLN6-210ENST00000635747 TDP2O95551 362 aa20.61■□□□□ 0.89
CLN6-210ENST00000635747 LETM2Q2VYF4 491 aa20.61■□□□□ 0.89
CLN6-210ENST00000635747 KIAA0319LQ8IZA0 1049 aa20.61■□□□□ 0.89
CLN6-210ENST00000635747 SP7Q8TDD2 431 aaPredicted RBP20.61■□□□□ 0.89
CLN6-210ENST00000635747 PPM1EQ8WY54 764 aa20.61■□□□□ 0.89
CLN6-210ENST00000635747 FAM20AQ96MK3 541 aa20.61■□□□□ 0.89
CLN6-210ENST00000635747 SAMD11Q96NU1 681 aa20.61■□□□□ 0.89
CLN6-210ENST00000635747 UNC45AQ9H3U1 944 aa20.61■□□□□ 0.89
CLN6-210ENST00000635747 LMCD1Q9NZU5 365 aa20.61■□□□□ 0.89
CLN6-210ENST00000635747 MICAL3Q7RTP6 2002 aa20.6■□□□□ 0.89
CLN6-210ENST00000635747 ZBTB42B2RXF5 422 aa20.6■□□□□ 0.89
CLN6-210ENST00000635747 ENPP3O14638 875 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms