RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 MGAT3Q09327 533 aa17.67■□□□□ 0.42
LINC00339-209ENST00000635450 FAM26DQ5JW98 314 aa17.67■□□□□ 0.42
LINC00339-209ENST00000635450 BLIDQ8IZY5 108 aa17.67■□□□□ 0.42
LINC00339-209ENST00000635450 IL27Q8NEV9 243 aa17.67■□□□□ 0.42
LINC00339-209ENST00000635450 ERAP1Q9NZ08 941 aa17.67■□□□□ 0.42
LINC00339-209ENST00000635450 NFASCO94856 1347 aa17.67■□□□□ 0.42
LINC00339-209ENST00000635450 MYO7AQ13402 2215 aa17.67■□□□□ 0.42
LINC00339-209ENST00000635450 TTC3P53804 2025 aa17.66■□□□□ 0.42
LINC00339-209ENST00000635450 MEIS1O00470 390 aa17.66■□□□□ 0.42
LINC00339-209ENST00000635450 CAND2O75155 1236 aa17.66■□□□□ 0.42
LINC00339-209ENST00000635450 GNAT1P11488 350 aa17.66■□□□□ 0.42
LINC00339-209ENST00000635450 INSRRP14616 1297 aa17.66■□□□□ 0.42
LINC00339-209ENST00000635450 TJAP1Q5JTD0 557 aa17.66■□□□□ 0.42
LINC00339-209ENST00000635450 NIPA1Q7RTP0 329 aa17.66■□□□□ 0.42
LINC00339-209ENST00000635450 PLA2G4DQ86XP0 818 aa17.66■□□□□ 0.42
LINC00339-209ENST00000635450 DAGLBQ8NCG7 672 aa17.66■□□□□ 0.42
LINC00339-209ENST00000635450 NSUN7Q8NE18 718 aaKnown RBP17.66■□□□□ 0.42
LINC00339-209ENST00000635450 DNAJB3Q8WWF6 145 aa17.66■□□□□ 0.42
LINC00339-209ENST00000635450 RAD9AQ99638 391 aa17.66■□□□□ 0.42
LINC00339-209ENST00000635450 SDF4Q9BRK5 362 aa17.66■□□□□ 0.42
LINC00339-209ENST00000635450 C17orf80Q9BSJ5 609 aa17.66■□□□□ 0.42
LINC00339-209ENST00000635450 SMARCAD1Q9H4L7 1026 aa17.66■□□□□ 0.42
LINC00339-209ENST00000635450 SH2B1Q9NRF2 756 aaPredicted RBP17.66■□□□□ 0.42
LINC00339-209ENST00000635450 BDP1A6H8Y1 2624 aa17.65■□□□□ 0.42
LINC00339-209ENST00000635450 EFCAB14O75071 495 aa17.65■□□□□ 0.42
LINC00339-209ENST00000635450 POU3F3P20264 500 aaPredicted RBP17.65■□□□□ 0.42
LINC00339-209ENST00000635450 HTRA4P83105 476 aaPredicted RBP17.65■□□□□ 0.42
LINC00339-209ENST00000635450 SETQ01105 290 aaPredicted RBP17.65■□□□□ 0.42
LINC00339-209ENST00000635450 LPIN1Q14693 890 aa17.65■□□□□ 0.42
LINC00339-209ENST00000635450 PLCB4Q15147 1175 aa17.65■□□□□ 0.42
LINC00339-209ENST00000635450 SEPT8Q92599 483 aa17.65■□□□□ 0.42
LINC00339-209ENST00000635450 IFIH1Q9BYX4 1025 aaKnown RBP17.65■□□□□ 0.42
LINC00339-209ENST00000635450 FAM49AQ9H0Q0 323 aaPredicted RBP17.65■□□□□ 0.42
LINC00339-209ENST00000635450 SUGCTQ9HAC7 445 aa17.65■□□□□ 0.42
LINC00339-209ENST00000635450 KCNJ14Q9UNX9 436 aa17.65■□□□□ 0.42
LINC00339-209ENST00000635450 DHX15O43143 795 aaKnown RBP17.64■□□□□ 0.41
LINC00339-209ENST00000635450 EDIL3O43854 480 aa17.64■□□□□ 0.41
LINC00339-209ENST00000635450 DTNBO60941 627 aa17.64■□□□□ 0.41
LINC00339-209ENST00000635450 UPP2O95045 317 aa17.64■□□□□ 0.41
LINC00339-209ENST00000635450 AMHP03971 560 aa17.64■□□□□ 0.41
LINC00339-209ENST00000635450 USP11P51784 963 aa17.64■□□□□ 0.41
LINC00339-209ENST00000635450 TMEM62Q0P6H9 643 aa17.64■□□□□ 0.41
LINC00339-209ENST00000635450 TRIM29Q14134 588 aa17.64■□□□□ 0.41
LINC00339-209ENST00000635450 CCDC60Q8IWA6 550 aaPredicted RBP17.64■□□□□ 0.41
LINC00339-209ENST00000635450 CCDC83Q8IWF9 413 aa17.64■□□□□ 0.41
LINC00339-209ENST00000635450 SP7Q8TDD2 431 aaPredicted RBP17.64■□□□□ 0.41
LINC00339-209ENST00000635450 LINC01599Q8WXQ3 324 aa17.64■□□□□ 0.41
LINC00339-209ENST00000635450 TBC1D32Q96NH3 1257 aa17.64■□□□□ 0.41
LINC00339-209ENST00000635450 PHF20Q9BVI0 1012 aa17.64■□□□□ 0.41
LINC00339-209ENST00000635450 BRMS1Q9HCU9 246 aa17.64■□□□□ 0.41
LINC00339-209ENST00000635450 TRPC6Q9Y210 931 aa17.64■□□□□ 0.41
LINC00339-209ENST00000635450 CDY2AQ9Y6F7 541 aa17.64■□□□□ 0.41
LINC00339-209ENST00000635450 CCDC194A0A1B0GVG4 234 aa17.63■□□□□ 0.41
LINC00339-209ENST00000635450 GTPBP6O43824 516 aaPredicted RBP17.63■□□□□ 0.41
LINC00339-209ENST00000635450 JAK2O60674 1132 aa17.63■□□□□ 0.41
LINC00339-209ENST00000635450 KCNQ1P51787 676 aa17.63■□□□□ 0.41
LINC00339-209ENST00000635450 ERVK-21P61565 698 aa17.63■□□□□ 0.41
LINC00339-209ENST00000635450 TAF2Q6P1X5 1199 aa17.63■□□□□ 0.41
LINC00339-209ENST00000635450 KRT25Q7Z3Z0 450 aa17.63■□□□□ 0.41
LINC00339-209ENST00000635450 RPAINQ86UA6 219 aa17.63■□□□□ 0.41
LINC00339-209ENST00000635450 TBCKQ8TEA7 893 aa17.63■□□□□ 0.41
LINC00339-209ENST00000635450 NECAB3Q96P71 396 aaPredicted RBP17.63■□□□□ 0.41
LINC00339-209ENST00000635450 ASB2Q96Q27 587 aa17.63■□□□□ 0.41
LINC00339-209ENST00000635450 TGS1Q96RS0 853 aaKnown RBP17.63■□□□□ 0.41
LINC00339-209ENST00000635450 LLPHQ9BRT6 129 aaKnown RBP17.63■□□□□ 0.41
LINC00339-209ENST00000635450 AGO3Q9H9G7 860 aaKnown RBP17.63■□□□□ 0.41
LINC00339-209ENST00000635450 IGKV6D-21A0A0A0MT36 114 aa17.62■□□□□ 0.41
LINC00339-209ENST00000635450 ATG7O95352 703 aa17.62■□□□□ 0.41
LINC00339-209ENST00000635450 FDPSP14324 419 aaKnown RBP17.62■□□□□ 0.41
LINC00339-209ENST00000635450 CIITAP33076 1130 aa17.62■□□□□ 0.41
LINC00339-209ENST00000635450 MRPS6P82932 125 aaKnown RBP17.62■□□□□ 0.41
LINC00339-209ENST00000635450 NONOQ15233 471 aaKnown RBP eCLIP17.62■□□□□ 0.41
LINC00339-209ENST00000635450 SKIV2LQ15477 1246 aaKnown RBP17.62■□□□□ 0.41
LINC00339-209ENST00000635450 PRR16Q569H4 304 aa17.62■□□□□ 0.41
LINC00339-209ENST00000635450 FBXO47Q5MNV8 452 aa17.62■□□□□ 0.41
LINC00339-209ENST00000635450 ATXN2LQ8WWM7 1075 aaKnown RBP17.62■□□□□ 0.41
LINC00339-209ENST00000635450 TOP1MTQ969P6 601 aa17.62■□□□□ 0.41
LINC00339-209ENST00000635450 LENG9Q96B70 501 aa17.62■□□□□ 0.41
LINC00339-209ENST00000635450 ZNF577Q9BSK1 485 aa17.62■□□□□ 0.41
LINC00339-209ENST00000635450 BACH2Q9BYV9 841 aa17.62■□□□□ 0.41
LINC00339-209ENST00000635450 TCEAL9Q9UHQ7 104 aa17.62■□□□□ 0.41
LINC00339-209ENST00000635450 M0R2N6 131 aa17.61■□□□□ 0.41
LINC00339-209ENST00000635450 IPO5O00410 1097 aaKnown RBP17.61■□□□□ 0.41
LINC00339-209ENST00000635450 ATP4AP20648 1035 aa17.61■□□□□ 0.41
LINC00339-209ENST00000635450 KRT2P35908 639 aa17.61■□□□□ 0.41
LINC00339-209ENST00000635450 STAT5BP51692 787 aa17.61■□□□□ 0.41
LINC00339-209ENST00000635450 HMGN5P82970 282 aaKnown RBP17.61■□□□□ 0.41
LINC00339-209ENST00000635450 NPY5RQ15761 445 aa17.61■□□□□ 0.41
LINC00339-209ENST00000635450 ABHD15Q6UXT9 468 aa17.61■□□□□ 0.41
LINC00339-209ENST00000635450 ADAMTS19Q8TE59 1207 aa17.61■□□□□ 0.41
LINC00339-209ENST00000635450 AZI2Q9H6S1 392 aa17.61■□□□□ 0.41
LINC00339-209ENST00000635450 GJB4Q9NTQ9 266 aa17.61■□□□□ 0.41
LINC00339-209ENST00000635450 INSL6Q9Y581 213 aa17.61■□□□□ 0.41
LINC00339-209ENST00000635450 POTEB3A0JP26 581 aa17.6■□□□□ 0.41
LINC00339-209ENST00000635450 ZBTB42B2RXF5 422 aa17.6■□□□□ 0.41
LINC00339-209ENST00000635450 CD52P31358 61 aa17.6■□□□□ 0.41
LINC00339-209ENST00000635450 MCM2P49736 904 aa17.6■□□□□ 0.41
LINC00339-209ENST00000635450 MRPS5P82675 430 aaKnown RBP17.6■□□□□ 0.41
LINC00339-209ENST00000635450 ST3GAL1Q11201 340 aa17.6■□□□□ 0.41
LINC00339-209ENST00000635450 POTEBQ6S5H4 581 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms