RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 MYO3AQ8NEV4 1616 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 HGSO14964 777 aaPredicted RBP3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 PPM1BO75688 479 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 FGRP09769 529 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 IMPDH2P12268 514 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 CCDC142Q17RM4 750 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 RNF151Q2KHN1 245 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 CCDC81Q6ZN84 652 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 NOP9Q86U38 636 aaKnown RBP3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 MCF2L2Q86YR7 1114 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 FAM177A1Q8N128 213 aaPredicted RBP3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 FBXO41Q8TF61 875 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 CLIP3Q96DZ5 547 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 TRMT2BQ96GJ1 504 aaKnown RBP3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 SEC16BQ96JE7 1060 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 DNAJC2Q99543 621 aaKnown RBP3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 HIRIP3Q9BW71 556 aaPredicted RBP3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 KATNBL1Q9H079 304 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 GBP3Q9H0R5 595 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 SLC2A4RGQ9NR83 387 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 CEP72Q9P209 647 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 EMC9Q9Y3B6 208 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 PCDHB4Q9Y5E5 795 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 TIMM13Q9Y5L4 95 aaPredicted RBP3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 IQSEC2Q5JU85 1478 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 FYCO1Q9BQS8 1478 aa3.67□□□□□ -1.82
SMARCB1-208ENST00000634926 CYP7B1O75881 506 aa3.66□□□□□ -1.82
SMARCB1-208ENST00000634926 LCP1P13796 627 aa3.66□□□□□ -1.82
SMARCB1-208ENST00000634926 BMP5P22003 454 aa3.66□□□□□ -1.82
SMARCB1-208ENST00000634926 ACRV1P26436 265 aa3.66□□□□□ -1.82
SMARCB1-208ENST00000634926 EMC4Q5J8M3 183 aa3.66□□□□□ -1.82
SMARCB1-208ENST00000634926 STEAP3Q658P3 488 aa3.66□□□□□ -1.82
SMARCB1-208ENST00000634926 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
SMARCB1-208ENST00000634926 RBM12BQ8IXT5 1001 aaKnown RBP3.66□□□□□ -1.82
SMARCB1-208ENST00000634926 GPR150Q8NGU9 434 aa3.66□□□□□ -1.82
SMARCB1-208ENST00000634926 ZNF483Q8TF39 744 aaPredicted RBP3.66□□□□□ -1.82
SMARCB1-208ENST00000634926 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.66□□□□□ -1.82
SMARCB1-208ENST00000634926 AKT3Q9Y243 479 aa3.66□□□□□ -1.82
SMARCB1-208ENST00000634926 SLC30A1Q9Y6M5 507 aa3.66□□□□□ -1.82
SMARCB1-208ENST00000634926 SCAPERQ9BY12 1400 aa3.66□□□□□ -1.82
SMARCB1-208ENST00000634926 CCDC18Q5T9S5 1454 aa3.66□□□□□ -1.82
SMARCB1-208ENST00000634926 SETD1BQ9UPS6 1966 aaKnown RBP3.65□□□□□ -1.82
SMARCB1-208ENST00000634926 ADGBQ8N7X0 1667 aa3.65□□□□□ -1.82
SMARCB1-208ENST00000634926 ARHGAP5Q13017 1502 aa3.65□□□□□ -1.82
SMARCB1-208ENST00000634926 SYCP2Q9BX26 1530 aa3.65□□□□□ -1.82
SMARCB1-208ENST00000634926 SRCAPQ6ZRS2 3230 aa3.65□□□□□ -1.82
SMARCB1-208ENST00000634926 TIAM1Q13009 1591 aa3.65□□□□□ -1.82
SMARCB1-208ENST00000634926 NCOA1Q15788 1441 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 CASKIN1Q8WXD9 1431 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 A0A1W2PQH9 124 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 STK10O94804 968 aaKnown RBP3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 IL18BPO95998 194 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 CKMP06732 381 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 ADH4P08319 380 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 FBLP22087 321 aaKnown RBP3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 GLRBP48167 497 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 RPL11P62913 178 aaKnown RBP3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 SLC7A5Q01650 507 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 COL9A2Q14055 689 aaPredicted RBP3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 SMAD2Q15796 467 aaKnown RBP3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 TBR1Q16650 682 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 CCDC144BQ3MJ40 725 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 GTF2IRD2BQ6EKJ0 949 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 GTF2IRD2Q86UP8 949 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 RPUSD2Q8IZ73 545 aaKnown RBP3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 STPG3Q8N7X2 389 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 RCBTB1Q8NDN9 531 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 CLEC4DQ8WXI8 215 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 PUS7Q96PZ0 661 aaKnown RBP3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 TTPALQ9BTX7 342 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 CDIP1Q9H305 208 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 KCND1Q9NSA2 647 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 HSPBP1Q9NZL4 362 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 SUGT1Q9Y2Z0 365 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 ATP7AQ04656 1500 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 FAM135AQ9P2D6 1515 aa3.65□□□□□ -1.83
SMARCB1-208ENST00000634926 SPATA31D1Q6ZQQ2 1576 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 NEURL4Q96JN8 1562 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 PTPRTO14522 1441 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 NPATQ14207 1427 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 TRAPPC8Q9Y2L5 1435 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 ALKQ9UM73 1620 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 FOXN1O15353 648 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 TBX1O43435 398 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 CR2P20023 1033 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 PROZP22891 400 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 ADRA1BP35368 520 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 SOX9P48436 509 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 GRIN1Q05586 938 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 FOXL1Q12952 345 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 NBPF6Q5VWK0 638 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 DENND5AQ6IQ26 1287 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 GIMAP6Q6P9H5 292 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 POLNQ7Z5Q5 900 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 ULK2Q8IYT8 1036 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 KREMEN2Q8NCW0 462 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 TMEM169Q96HH4 297 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 NBPF4Q96M43 638 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 OR14A2Q96R54 314 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms