RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 LMCD1Q9NZU5 365 aa13.76□□□□□ -0.21
UBR1-212ENST00000627960 VPS54Q9P1Q0 977 aa13.76□□□□□ -0.21
UBR1-212ENST00000627960 MTUS1Q9ULD2 1270 aa13.76□□□□□ -0.21
UBR1-212ENST00000627960 CDY2AQ9Y6F7 541 aa13.76□□□□□ -0.21
UBR1-212ENST00000627960 TTC3P53804 2025 aa13.75□□□□□ -0.21
UBR1-212ENST00000627960 BACH1O14867 736 aa13.75□□□□□ -0.21
UBR1-212ENST00000627960 UPP2O95045 317 aa13.75□□□□□ -0.21
UBR1-212ENST00000627960 SETQ01105 290 aaPredicted RBP13.75□□□□□ -0.21
UBR1-212ENST00000627960 SSRP1Q08945 709 aaKnown RBP13.75□□□□□ -0.21
UBR1-212ENST00000627960 ERICH6BQ5W0A0 696 aa13.75□□□□□ -0.21
UBR1-212ENST00000627960 MIS18BP1Q6P0N0 1132 aa13.75□□□□□ -0.21
UBR1-212ENST00000627960 MTHFD1LQ6UB35 978 aa13.75□□□□□ -0.21
UBR1-212ENST00000627960 TRIM22Q8IYM9 498 aa13.75□□□□□ -0.21
UBR1-212ENST00000627960 GDPD5Q8WTR4 605 aa13.75□□□□□ -0.21
UBR1-212ENST00000627960 LARP6Q9BRS8 491 aaKnown RBP13.75□□□□□ -0.21
UBR1-212ENST00000627960 UPF3BQ9BZI7 483 aaKnown RBP13.75□□□□□ -0.21
UBR1-212ENST00000627960 FAM49AQ9H0Q0 323 aaPredicted RBP13.75□□□□□ -0.21
UBR1-212ENST00000627960 ZNF302Q9NR11 478 aa13.75□□□□□ -0.21
UBR1-212ENST00000627960 PDRG1Q9NUG6 133 aa13.75□□□□□ -0.21
UBR1-212ENST00000627960 SQORQ9Y6N5 450 aa13.75□□□□□ -0.21
UBR1-212ENST00000627960 TCF20Q9UGU0 1960 aaKnown RBP13.74□□□□□ -0.21
UBR1-212ENST00000627960 RALGAPA2Q2PPJ7 1873 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 SMIM35A0A1B0GVV1 85 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 ENPP3O14638 875 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 EDIL3O43854 480 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 HBP1O60381 514 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 DEXIO95424 95 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 NLRP5P59047 1200 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 SKIV2LQ15477 1246 aaKnown RBP13.74□□□□□ -0.21
UBR1-212ENST00000627960 PRR16Q569H4 304 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 ZNF746Q6NUN9 644 aaPredicted RBP13.74□□□□□ -0.21
UBR1-212ENST00000627960 SWSAP1Q6NVH7 229 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 TSHZ1Q6ZSZ6 1077 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 CCDC60Q8IWA6 550 aaPredicted RBP13.74□□□□□ -0.21
UBR1-212ENST00000627960 NME8Q8N427 588 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 ATP8B4Q8TF62 1192 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 LENG9Q96B70 501 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 YME1L1Q96TA2 773 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 C17orf80Q9BSJ5 609 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 TRPV2Q9Y5S1 764 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 VCANP13611 3396 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 COL4A6Q14031 1691 aa13.74□□□□□ -0.21
UBR1-212ENST00000627960 NCOR1O75376 2440 aa13.73□□□□□ -0.21
UBR1-212ENST00000627960 COL1A2P08123 1366 aa13.73□□□□□ -0.21
UBR1-212ENST00000627960 CPLX1O14810 134 aa13.73□□□□□ -0.21
UBR1-212ENST00000627960 ATP4AP20648 1035 aa13.73□□□□□ -0.21
UBR1-212ENST00000627960 KLRC1P26715 233 aa13.73□□□□□ -0.21
UBR1-212ENST00000627960 USP11P51784 963 aa13.73□□□□□ -0.21
UBR1-212ENST00000627960 KRT76Q01546 638 aa13.73□□□□□ -0.21
UBR1-212ENST00000627960 TMEM62Q0P6H9 643 aa13.73□□□□□ -0.21
UBR1-212ENST00000627960 STK3Q13188 491 aa13.73□□□□□ -0.21
UBR1-212ENST00000627960 ZNF484Q5JVG2 852 aa13.73□□□□□ -0.21
UBR1-212ENST00000627960 PDXDC2PQ6P474 469 aa13.73□□□□□ -0.21
UBR1-212ENST00000627960 CPLX2Q6PUV4 134 aaKnown RBP13.73□□□□□ -0.21
UBR1-212ENST00000627960 SMAP1Q8IYB5 467 aaPredicted RBP13.73□□□□□ -0.21
UBR1-212ENST00000627960 FBXO22Q8NEZ5 403 aa13.73□□□□□ -0.21
UBR1-212ENST00000627960 IL17RAQ96F46 866 aa13.73□□□□□ -0.21
UBR1-212ENST00000627960 SAMD11Q96NU1 681 aa13.73□□□□□ -0.21
UBR1-212ENST00000627960 CELF4Q9BZC1 486 aaKnown RBP13.73□□□□□ -0.21
UBR1-212ENST00000627960 AGO3Q9H9G7 860 aaKnown RBP13.73□□□□□ -0.21
UBR1-212ENST00000627960 PCDHA4Q9UN74 947 aa13.73□□□□□ -0.21
UBR1-212ENST00000627960 COG5Q9UP83 839 aa13.73□□□□□ -0.21
UBR1-212ENST00000627960 PCDHA10Q9Y5I2 948 aa13.73□□□□□ -0.21
UBR1-212ENST00000627960 MAFBQ9Y5Q3 323 aaPredicted RBP13.73□□□□□ -0.21
UBR1-212ENST00000627960 KDM3AQ9Y4C1 1321 aa13.72□□□□□ -0.21
UBR1-212ENST00000627960 M0QZ92 97 aa13.72□□□□□ -0.21
UBR1-212ENST00000627960 MSH4O15457 936 aa13.72□□□□□ -0.21
UBR1-212ENST00000627960 PSAPP07602 524 aa13.72□□□□□ -0.21
UBR1-212ENST00000627960 CD52P31358 61 aa13.72□□□□□ -0.21
UBR1-212ENST00000627960 EPC2Q52LR7 807 aa13.72□□□□□ -0.21
UBR1-212ENST00000627960 FAM177A1Q8N128 213 aaPredicted RBP13.72□□□□□ -0.21
UBR1-212ENST00000627960 BBXQ8WY36 941 aaPredicted RBP13.72□□□□□ -0.21
UBR1-212ENST00000627960 C22orf23Q9BZE7 217 aa13.72□□□□□ -0.21
UBR1-212ENST00000627960 TCEAL9Q9UHQ7 104 aa13.72□□□□□ -0.21
UBR1-212ENST00000627960 BRWD1Q9NSI6 2320 aa13.72□□□□□ -0.21
UBR1-212ENST00000627960 SPTBN5Q9NRC6 3674 aaKnown RBP13.71□□□□□ -0.21
UBR1-212ENST00000627960 IGSF9BQ9UPX0 1349 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 ZBTB42B2RXF5 422 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 M0R2N6 131 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 BMP1P13497 986 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 TFF2Q03403 129 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 AAK1Q2M2I8 961 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 RTN4RL1Q86UN2 441 aaPredicted RBP13.71□□□□□ -0.21
UBR1-212ENST00000627960 TMEM192Q8IY95 271 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 CKAP2LQ8IYA6 745 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 KIAA0319LQ8IZA0 1049 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 BLIDQ8IZY5 108 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 DAGLBQ8NCG7 672 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 ADAMTS19Q8TE59 1207 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 TBCKQ8TEA7 893 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 LINC01599Q8WXQ3 324 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 SLC5A5Q92911 643 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 HLA-CQ95604 372 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 RIT2Q99578 217 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 FTHL17Q9BXU8 183 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 GABBR1Q9UBS5 961 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 PADI3Q9ULW8 664 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 SAMM50Q9Y512 469 aa13.71□□□□□ -0.21
UBR1-212ENST00000627960 CYP3A7-CYP3A51PA0A087WV96 503 aa13.7□□□□□ -0.22
UBR1-212ENST00000627960 WDR64B1ANS9 1081 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms