RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 CASP10Q92851 521 aa16.13■□□□□ 0.17
SNX1-214ENST00000625244 TMX1Q9H3N1 280 aa16.13■□□□□ 0.17
SNX1-214ENST00000625244 ENTPD7Q9NQZ7 604 aa16.13■□□□□ 0.17
SNX1-214ENST00000625244 TYW1Q9NV66 732 aaKnown RBP16.13■□□□□ 0.17
SNX1-214ENST00000625244 TUBE1Q9UJT0 475 aa16.13■□□□□ 0.17
SNX1-214ENST00000625244 PADI3Q9ULW8 664 aa16.13■□□□□ 0.17
SNX1-214ENST00000625244 HCFC2Q9Y5Z7 792 aa16.13■□□□□ 0.17
SNX1-214ENST00000625244 MBLAC1A4D2B0 266 aaPredicted RBP16.12■□□□□ 0.17
SNX1-214ENST00000625244 TBKBP1A7MCY6 615 aa16.12■□□□□ 0.17
SNX1-214ENST00000625244 DHX16O60231 1041 aaKnown RBP16.12■□□□□ 0.17
SNX1-214ENST00000625244 MTHFRP42898 656 aa16.12■□□□□ 0.17
SNX1-214ENST00000625244 SP4Q02446 784 aa16.12■□□□□ 0.17
SNX1-214ENST00000625244 NEDD9Q14511 834 aa16.12■□□□□ 0.17
SNX1-214ENST00000625244 ALX1Q15699 326 aa16.12■□□□□ 0.17
SNX1-214ENST00000625244 GRIK4Q16099 956 aa16.12■□□□□ 0.17
SNX1-214ENST00000625244 FAM102BQ5T8I3 360 aa16.12■□□□□ 0.17
SNX1-214ENST00000625244 SIX5Q8N196 739 aa16.12■□□□□ 0.17
SNX1-214ENST00000625244 MRPS27Q92552 414 aaKnown RBP16.12■□□□□ 0.17
SNX1-214ENST00000625244 ZKSCAN3Q9BRR0 538 aa16.12■□□□□ 0.17
SNX1-214ENST00000625244 RALYQ9UKM9 306 aaKnown RBP16.12■□□□□ 0.17
SNX1-214ENST00000625244 LZTS1Q9Y250 596 aa16.12■□□□□ 0.17
SNX1-214ENST00000625244 KAT6AQ92794 2004 aa16.11■□□□□ 0.17
SNX1-214ENST00000625244 SPATA31C2B4DYI2 1134 aa16.11■□□□□ 0.17
SNX1-214ENST00000625244 PPP1R11O60927 126 aaPredicted RBP16.11■□□□□ 0.17
SNX1-214ENST00000625244 FGAP02671 866 aa16.11■□□□□ 0.17
SNX1-214ENST00000625244 SARSP49591 514 aaKnown RBP16.11■□□□□ 0.17
SNX1-214ENST00000625244 MRPS9P82933 396 aaKnown RBP16.11■□□□□ 0.17
SNX1-214ENST00000625244 KANK3Q6NY19 840 aa16.11■□□□□ 0.17
SNX1-214ENST00000625244 PLCD3Q8N3E9 789 aa16.11■□□□□ 0.17
SNX1-214ENST00000625244 C12orf76Q8N812 135 aaPredicted RBP16.11■□□□□ 0.17
SNX1-214ENST00000625244 FAM49AQ9H0Q0 323 aaPredicted RBP16.11■□□□□ 0.17
SNX1-214ENST00000625244 CWH43Q9H720 699 aa16.11■□□□□ 0.17
SNX1-214ENST00000625244 NGRNQ9NPE2 291 aaKnown RBP16.11■□□□□ 0.17
SNX1-214ENST00000625244 PCDHB7Q9Y5E2 793 aa16.11■□□□□ 0.17
SNX1-214ENST00000625244 ATXN1P54253 815 aaKnown RBP16.1■□□□□ 0.17
SNX1-214ENST00000625244 HAND2P61296 217 aa16.1■□□□□ 0.17
SNX1-214ENST00000625244 PLCB3Q01970 1234 aa16.1■□□□□ 0.17
SNX1-214ENST00000625244 TMEM62Q0P6H9 643 aa16.1■□□□□ 0.17
SNX1-214ENST00000625244 PAK2Q13177 524 aa16.1■□□□□ 0.17
SNX1-214ENST00000625244 RARS2Q5T160 578 aaKnown RBP16.1■□□□□ 0.17
SNX1-214ENST00000625244 FCHSD1Q86WN1 690 aa16.1■□□□□ 0.17
SNX1-214ENST00000625244 PNMA1Q8ND90 353 aa16.1■□□□□ 0.17
SNX1-214ENST00000625244 FEZF2Q8TBJ5 459 aa16.1■□□□□ 0.17
SNX1-214ENST00000625244 AMNQ9BXJ7 453 aa16.1■□□□□ 0.17
SNX1-214ENST00000625244 MAP3K20Q9NYL2 800 aaKnown RBP16.1■□□□□ 0.17
SNX1-214ENST00000625244 PUF60Q9UHX1 559 aaKnown RBP16.1■□□□□ 0.17
SNX1-214ENST00000625244 DBR1Q9UK59 544 aaKnown RBP16.1■□□□□ 0.17
SNX1-214ENST00000625244 FBXL21Q9UKT6 434 aa16.1■□□□□ 0.17
SNX1-214ENST00000625244 USTQ9Y2C2 406 aa16.1■□□□□ 0.17
SNX1-214ENST00000625244 SQORQ9Y6N5 450 aa16.1■□□□□ 0.17
SNX1-214ENST00000625244 FRYQ5TBA9 3013 aa16.1■□□□□ 0.17
SNX1-214ENST00000625244 FAM208BQ5VWN6 2430 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 MGEA5O60502 916 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 EOMESO95936 686 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 MARK3P27448 753 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 TDGQ13569 410 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 TMEM266Q2M3C6 531 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 GNPTABQ3T906 1256 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 ASPRV1Q53RT3 343 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 IER5Q5VY09 327 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 KIAA1841Q6NSI8 718 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 PI4K2BQ8TCG2 481 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 INPP4AQ96PE3 977 aaPredicted RBP16.09■□□□□ 0.17
SNX1-214ENST00000625244 CYP26B1Q9NR63 512 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 RTEL1Q9NZ71 1219 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 DDX19BQ9UMR2 479 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 DUSP12Q9UNI6 340 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 PCDHA1Q9Y5I3 950 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 TRPV2Q9Y5S1 764 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 IGSF9BQ9UPX0 1349 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 DOCK5Q9H7D0 1870 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 ZZEF1O43149 2961 aa16.09■□□□□ 0.17
SNX1-214ENST00000625244 FNDC1Q4ZHG4 1894 aaPredicted RBP16.08■□□□□ 0.17
SNX1-214ENST00000625244 CLASP2O75122 1294 aaKnown RBP16.08■□□□□ 0.16
SNX1-214ENST00000625244 SP9P0CG40 484 aa16.08■□□□□ 0.16
SNX1-214ENST00000625244 TCF7P36402 384 aaPredicted RBP16.08■□□□□ 0.16
SNX1-214ENST00000625244 IGBP1P78318 339 aa16.08■□□□□ 0.16
SNX1-214ENST00000625244 COL9A2Q14055 689 aaPredicted RBP16.08■□□□□ 0.16
SNX1-214ENST00000625244 ATAT1Q5SQI0 421 aa16.08■□□□□ 0.16
SNX1-214ENST00000625244 TMC7Q7Z402 723 aa16.08■□□□□ 0.16
SNX1-214ENST00000625244 DGKHQ86XP1 1220 aa16.08■□□□□ 0.16
SNX1-214ENST00000625244 TBC1D10CQ8IV04 446 aa16.08■□□□□ 0.16
SNX1-214ENST00000625244 SUMF1Q8NBK3 374 aa16.08■□□□□ 0.16
SNX1-214ENST00000625244 RNF216Q9NWF9 866 aaPredicted RBP16.08■□□□□ 0.16
SNX1-214ENST00000625244 FASNP49327 2511 aaKnown RBP16.08■□□□□ 0.16
SNX1-214ENST00000625244 MYH6P13533 1939 aa16.07■□□□□ 0.16
SNX1-214ENST00000625244 C2orf71A6NGG8 1288 aa16.07■□□□□ 0.16
SNX1-214ENST00000625244 STK25O00506 426 aa16.07■□□□□ 0.16
SNX1-214ENST00000625244 LAG3P18627 525 aa16.07■□□□□ 0.16
SNX1-214ENST00000625244 PBX3P40426 434 aa16.07■□□□□ 0.16
SNX1-214ENST00000625244 KIAA0319Q5VV43 1072 aa16.07■□□□□ 0.16
SNX1-214ENST00000625244 ZC3H14Q6PJT7 736 aaKnown RBP16.07■□□□□ 0.16
SNX1-214ENST00000625244 MFSD6Q6ZSS7 791 aa16.07■□□□□ 0.16
SNX1-214ENST00000625244 MRPL43Q8N983 215 aaKnown RBP16.07■□□□□ 0.16
SNX1-214ENST00000625244 KRBA1A5PL33 1030 aa16.06■□□□□ 0.16
SNX1-214ENST00000625244 GCOM1H8Y6P7 765 aaPredicted RBP16.06■□□□□ 0.16
SNX1-214ENST00000625244 FIBPO43427 364 aa16.06■□□□□ 0.16
SNX1-214ENST00000625244 NARSO43776 548 aaKnown RBP16.06■□□□□ 0.16
SNX1-214ENST00000625244 PARP1P09874 1014 aaKnown RBP16.06■□□□□ 0.16
SNX1-214ENST00000625244 POLR2MP0CAP2 368 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms