RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 BBXQ8WY36 941 aaPredicted RBP14.08□□□□□ -0.16
LINC00963-217ENST00000624009 FAM167AQ96KS9 214 aa14.08□□□□□ -0.16
LINC00963-217ENST00000624009 KIF2CQ99661 725 aa14.08□□□□□ -0.16
LINC00963-217ENST00000624009 TRPC6Q9Y210 931 aa14.08□□□□□ -0.16
LINC00963-217ENST00000624009 SMIM35A0A1B0GVV1 85 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 BACH1O14867 736 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 TBX3O15119 743 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 GAS7O60861 476 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 PSMD10O75832 226 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 MARK3P27448 753 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 WDR5P61964 334 aaKnown RBP14.07□□□□□ -0.16
LINC00963-217ENST00000624009 IER5Q5VY09 327 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 B3GNT9Q6UX72 402 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 NEK8Q86SG6 692 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 HERC6Q8IVU3 1022 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 CCDC60Q8IWA6 550 aaPredicted RBP14.07□□□□□ -0.16
LINC00963-217ENST00000624009 USP38Q8NB14 1042 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 SEPT8Q92599 483 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 FAM20AQ96MK3 541 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 CDX2Q99626 313 aaPredicted RBP14.07□□□□□ -0.16
LINC00963-217ENST00000624009 TEKT3Q9BXF9 490 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 SLC28A3Q9HAS3 691 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 UPF2Q9HAU5 1272 aaKnown RBP14.07□□□□□ -0.16
LINC00963-217ENST00000624009 CEP131Q9UPN4 1083 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 IGSF9BQ9UPX0 1349 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 KDM3AQ9Y4C1 1321 aa14.07□□□□□ -0.16
LINC00963-217ENST00000624009 GRXCR1A8MXD5 290 aa14.06□□□□□ -0.16
LINC00963-217ENST00000624009 LARGE1O95461 756 aa14.06□□□□□ -0.16
LINC00963-217ENST00000624009 MGAT3Q09327 533 aa14.06□□□□□ -0.16
LINC00963-217ENST00000624009 RABEP1Q15276 862 aa14.06□□□□□ -0.16
LINC00963-217ENST00000624009 LRCH2Q5VUJ6 765 aa14.06□□□□□ -0.16
LINC00963-217ENST00000624009 SWSAP1Q6NVH7 229 aa14.06□□□□□ -0.16
LINC00963-217ENST00000624009 PDXDC2PQ6P474 469 aa14.06□□□□□ -0.16
LINC00963-217ENST00000624009 ETNPPLQ8TBG4 499 aa14.06□□□□□ -0.16
LINC00963-217ENST00000624009 DISC1Q9NRI5 854 aa14.06□□□□□ -0.16
LINC00963-217ENST00000624009 KCNJ14Q9UNX9 436 aa14.06□□□□□ -0.16
LINC00963-217ENST00000624009 COL4A6Q14031 1691 aa14.06□□□□□ -0.16
LINC00963-217ENST00000624009 DDX39AO00148 427 aaKnown RBP14.05□□□□□ -0.16
LINC00963-217ENST00000624009 GJB5O95377 273 aa14.05□□□□□ -0.16
LINC00963-217ENST00000624009 CHRNA1P02708 482 aa14.05□□□□□ -0.16
LINC00963-217ENST00000624009 MMP1P03956 469 aa14.05□□□□□ -0.16
LINC00963-217ENST00000624009 KRT2P35908 639 aa14.05□□□□□ -0.16
LINC00963-217ENST00000624009 PBX2P40425 430 aa14.05□□□□□ -0.16
LINC00963-217ENST00000624009 HMGN5P82970 282 aaKnown RBP14.05□□□□□ -0.16
LINC00963-217ENST00000624009 INF2Q27J81 1249 aa14.05□□□□□ -0.16
LINC00963-217ENST00000624009 MTHFD1LQ6UB35 978 aa14.05□□□□□ -0.16
LINC00963-217ENST00000624009 RUFY4Q6ZNE9 571 aa14.05□□□□□ -0.16
LINC00963-217ENST00000624009 NECAB1Q8N987 351 aa14.05□□□□□ -0.16
LINC00963-217ENST00000624009 DBF4BQ8NFT6 615 aa14.05□□□□□ -0.16
LINC00963-217ENST00000624009 TNFRSF25Q93038 417 aa14.05□□□□□ -0.16
LINC00963-217ENST00000624009 KCNMB3Q9NPA1 279 aa14.05□□□□□ -0.16
LINC00963-217ENST00000624009 DDX25Q9UHL0 483 aaKnown RBP14.05□□□□□ -0.16
LINC00963-217ENST00000624009 YBX2Q9Y2T7 364 aaKnown RBP14.05□□□□□ -0.16
LINC00963-217ENST00000624009 ZBTB42B2RXF5 422 aa14.04□□□□□ -0.16
LINC00963-217ENST00000624009 M0QZ92 97 aa14.04□□□□□ -0.16
LINC00963-217ENST00000624009 MAGEB2O15479 319 aa14.04□□□□□ -0.16
LINC00963-217ENST00000624009 TDP2O95551 362 aa14.04□□□□□ -0.16
LINC00963-217ENST00000624009 AMHP03971 560 aa14.04□□□□□ -0.16
LINC00963-217ENST00000624009 ATP4AP20648 1035 aa14.04□□□□□ -0.16
LINC00963-217ENST00000624009 MRPS6P82932 125 aaKnown RBP14.04□□□□□ -0.16
LINC00963-217ENST00000624009 TRIM29Q14134 588 aa14.04□□□□□ -0.16
LINC00963-217ENST00000624009 IFIH1Q9BYX4 1025 aaKnown RBP14.04□□□□□ -0.16
LINC00963-217ENST00000624009 SAMM50Q9Y512 469 aa14.04□□□□□ -0.16
LINC00963-217ENST00000624009 MYO7AQ13402 2215 aa14.04□□□□□ -0.16
LINC00963-217ENST00000624009 ST18O60284 1047 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 CTSHP09668 335 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 KLRC1P26715 233 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 ST3GAL1Q11201 340 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 PPP2R5CQ13362 524 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 GRIN2CQ14957 1233 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 LETM2Q2VYF4 491 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 FBXO47Q5MNV8 452 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 PPP2R2DQ66LE6 453 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 TSHZ1Q6ZSZ6 1077 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 PIK3AP1Q6ZUJ8 805 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 SLFN12Q8IYM2 578 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 DNAJB3Q8WWF6 145 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 FAM161BQ96MY7 647 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 RAD9AQ99638 391 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 FTHL17Q9BXU8 183 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 NKX2-4Q9H2Z4 354 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 NRBP2Q9NSY0 501 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 GABBR1Q9UBS5 961 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 PPME1Q9Y570 386 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 RALGAPA2Q2PPJ7 1873 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 NLRC5Q86WI3 1866 aa14.03□□□□□ -0.16
LINC00963-217ENST00000624009 VCANP13611 3396 aa14.02□□□□□ -0.16
LINC00963-217ENST00000624009 TLL1O43897 1013 aa14.02□□□□□ -0.17
LINC00963-217ENST00000624009 JAK2O60674 1132 aa14.02□□□□□ -0.17
LINC00963-217ENST00000624009 DKC1O60832 514 aaKnown RBP eCLIP14.02□□□□□ -0.171e-14■■■■■ 32.4
LINC00963-217ENST00000624009 C22orf31O95567 290 aa14.02□□□□□ -0.17
LINC00963-217ENST00000624009 OATP04181 439 aa14.02□□□□□ -0.17
LINC00963-217ENST00000624009 FOSL2P15408 326 aa14.02□□□□□ -0.17
LINC00963-217ENST00000624009 POU3F3P20264 500 aaPredicted RBP14.02□□□□□ -0.17
LINC00963-217ENST00000624009 MCM2P49736 904 aa14.02□□□□□ -0.17
LINC00963-217ENST00000624009 RABGGTBP53611 331 aa14.02□□□□□ -0.17
LINC00963-217ENST00000624009 IGBP1P78318 339 aa14.02□□□□□ -0.17
LINC00963-217ENST00000624009 HTRA4P83105 476 aaPredicted RBP14.02□□□□□ -0.17
LINC00963-217ENST00000624009 ORC2Q13416 577 aaPredicted RBP14.02□□□□□ -0.17
LINC00963-217ENST00000624009 LPIN1Q14693 890 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms