RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 HDAC7Q8WUI4 952 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 DYDC2Q96IM9 177 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 GLIS2Q9BZE0 524 aaPredicted RBP13.16□□□□□ -0.3
TP53-227ENST00000622645 TMEM39BQ9GZU3 492 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 FBXO28Q9NVF7 368 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 ASTN1O14525 1302 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 TARSL2A2RTX5 802 aaKnown RBP13.15□□□□□ -0.3
TP53-227ENST00000622645 GCOM1H8Y6P7 765 aaPredicted RBP13.15□□□□□ -0.3
TP53-227ENST00000622645 PHACTR2O75167 634 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 NR3C1P04150 777 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 POLR2MP0CAP2 368 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 XRCC5P13010 732 aaKnown RBP13.15□□□□□ -0.3
TP53-227ENST00000622645 PRLRP16471 622 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 KLRC1P26715 233 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 GPS2Q13227 327 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 SLC18A3Q16572 532 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 TCERG1LQ5VWI1 586 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 DPY19L2P1Q6NXN4 242 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 SUPT20HQ8NEM7 779 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 SPATA4Q8NEY3 305 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 FAM151AQ8WW52 585 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 CCDC102AQ96A19 550 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 PACSIN1Q9BY11 444 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 GOPCQ9HD26 462 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 AIPL1Q9NZN9 384 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 VPS18Q9P253 973 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 HYOU1Q9Y4L1 999 aa13.15□□□□□ -0.3
TP53-227ENST00000622645 CALUO43852 315 aaPredicted RBP13.15□□□□□ -0.31
TP53-227ENST00000622645 PSMD10O75832 226 aa13.15□□□□□ -0.31
TP53-227ENST00000622645 AFPP02771 609 aaKnown RBP13.15□□□□□ -0.31
TP53-227ENST00000622645 TCP1P17987 556 aaKnown RBP13.15□□□□□ -0.31
TP53-227ENST00000622645 NMT1P30419 496 aaKnown RBP13.15□□□□□ -0.31
TP53-227ENST00000622645 TNNT3P45378 269 aaPredicted RBP13.15□□□□□ -0.31
TP53-227ENST00000622645 DNA2P51530 1060 aa13.15□□□□□ -0.31
TP53-227ENST00000622645 ZC2HC1CQ53FD0 456 aaPredicted RBP13.15□□□□□ -0.31
TP53-227ENST00000622645 KSR1Q8IVT5 923 aa13.15□□□□□ -0.31
TP53-227ENST00000622645 LRRC1Q9BTT6 524 aa13.15□□□□□ -0.31
TP53-227ENST00000622645 PDGFDQ9GZP0 370 aaPredicted RBP13.15□□□□□ -0.31
TP53-227ENST00000622645 ZNF277Q9NRM2 450 aaPredicted RBP13.15□□□□□ -0.31
TP53-227ENST00000622645 TYW1Q9NV66 732 aaKnown RBP13.15□□□□□ -0.31
TP53-227ENST00000622645 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.31
TP53-227ENST00000622645 STK24Q9Y6E0 443 aa13.15□□□□□ -0.31
TP53-227ENST00000622645 UCHL3P15374 230 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 PON1P27169 355 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 SLC15A2Q16348 729 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 ASIC2Q16515 512 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 EXOC3L4Q17RC7 722 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 KIAA0753Q2KHM9 967 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 IQCEQ6IPM2 695 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 DNAAF5Q86Y56 855 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 OGFOD1Q8N543 542 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 RNF10Q8N5U6 811 aaKnown RBP13.14□□□□□ -0.31
TP53-227ENST00000622645 MYCT1Q8N699 235 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 MS4A14Q96JA4 679 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 WRAP73Q9P2S5 460 aaPredicted RBP13.14□□□□□ -0.31
TP53-227ENST00000622645 DMGDHQ9UI17 866 aaKnown RBP13.14□□□□□ -0.31
TP53-227ENST00000622645 SYNPO2Q9UMS6 1093 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 SCAF8Q9UPN6 1271 aaKnown RBP13.14□□□□□ -0.31
TP53-227ENST00000622645 CNTNAP1P78357 1384 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 TGFB1I1O43294 461 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 PALMO75781 387 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 ARP10275 920 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 MCM3P25205 808 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 PTK2Q05397 1052 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 BMT2Q1RMZ1 405 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 CCNI2Q6ZMN8 369 aaPredicted RBP13.14□□□□□ -0.31
TP53-227ENST00000622645 C1orf186Q6ZWK4 172 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 LARGE2Q8N3Y3 721 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 MSL3Q8N5Y2 521 aaKnown RBP13.14□□□□□ -0.31
TP53-227ENST00000622645 SPAG5Q96R06 1193 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 RANBP17Q9H2T7 1088 aaKnown RBP13.14□□□□□ -0.31
TP53-227ENST00000622645 FAN1Q9Y2M0 1017 aa13.14□□□□□ -0.31
TP53-227ENST00000622645 GAS7O60861 476 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 FTCDO95954 541 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 SLC7A5Q01650 507 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 NAB2Q15742 525 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 CEP55Q53EZ4 464 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 CCDC181Q5TID7 509 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 ZNF772Q68DY9 489 aaPredicted RBP13.13□□□□□ -0.31
TP53-227ENST00000622645 IRF2BP2Q7Z5L9 587 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 MMGT1Q8N4V1 131 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 SLC35C1Q96A29 364 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 GMLQ99445 158 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 VCPKMTQ9H867 229 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 COL2A1P02458 1487 aaPredicted RBP13.13□□□□□ -0.31
TP53-227ENST00000622645 FAM13AO94988 1023 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 VIL1P09327 827 aaKnown RBP13.13□□□□□ -0.31
TP53-227ENST00000622645 RPL13P26373 211 aaKnown RBP13.13□□□□□ -0.31
TP53-227ENST00000622645 PPP2R5CQ13362 524 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 MAP9Q49MG5 647 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 ZNF571Q7Z3V5 609 aaPredicted RBP13.13□□□□□ -0.31
TP53-227ENST00000622645 TXLNBQ8N3L3 684 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 RBM46Q8TBY0 533 aaKnown RBP13.13□□□□□ -0.31
TP53-227ENST00000622645 CHURC1Q8WUH1 139 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 SLC5A5Q92911 643 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 OLFML3Q9NRN5 406 aa13.13□□□□□ -0.31
TP53-227ENST00000622645 AJAP1Q9UKB5 411 aaPredicted RBP13.13□□□□□ -0.31
TP53-227ENST00000622645 PACSIN2Q9UNF0 486 aaPredicted RBP13.13□□□□□ -0.31
TP53-227ENST00000622645 EPB41P11171 864 aaKnown RBP13.12□□□□□ -0.31
TP53-227ENST00000622645 COG2Q14746 738 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms