RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 RHOBTB3O94955 611 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 CAVIN2O95810 425 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 IGHA2P01877 340 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 KRT18P05783 430 aaKnown RBP11.87□□□□□ -0.51
CPNE3-212ENST00000621783 PTGS1P23219 599 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 YWHABP31946 246 aaKnown RBP11.87□□□□□ -0.51
CPNE3-212ENST00000621783 ZNF165P49910 485 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 PRKCEQ02156 737 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 IRF5Q13568 498 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 KIF22Q14807 665 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 ARSHQ5FYA8 562 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 GJC2Q5T442 439 aaPredicted RBP11.87□□□□□ -0.51
CPNE3-212ENST00000621783 SWSAP1Q6NVH7 229 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 DHX37Q8IY37 1157 aaKnown RBP11.87□□□□□ -0.51
CPNE3-212ENST00000621783 SMYD4Q8IYR2 804 aaPredicted RBP11.87□□□□□ -0.51
CPNE3-212ENST00000621783 DNAJC19Q96DA6 116 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 SPATA33Q96N06 139 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 GPR20Q99678 358 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 ZNF302Q9NR11 478 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 BMP2KQ9NSY1 1161 aaPredicted RBP11.87□□□□□ -0.51
CPNE3-212ENST00000621783 DBR1Q9UK59 544 aaKnown RBP11.87□□□□□ -0.51
CPNE3-212ENST00000621783 GABRQQ9UN88 632 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 DOCK3Q8IZD9 2030 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 PVALEFA0A1B0GWK0 134 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 FRMD3A2A2Y4 597 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 TMEM150BA6NC51 233 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 NOP56O00567 594 aaKnown RBP11.86□□□□□ -0.51
CPNE3-212ENST00000621783 STBD1O95210 358 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 GH1P01241 217 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 IDEP14735 1019 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 CYP2C19P33261 490 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 TCF7P36402 384 aaPredicted RBP11.86□□□□□ -0.51
CPNE3-212ENST00000621783 RARRES1P49788 294 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 PRKCZQ05513 592 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 COASYQ13057 564 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 HSDL1Q3SXM5 330 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 PRAMEF19Q5SWL8 479 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 ZNF658Q5TYW1 1059 aaPredicted RBP11.86□□□□□ -0.51
CPNE3-212ENST00000621783 FAM160B1Q5W0V3 765 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 PLA2G4FQ68DD2 849 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 RINT1Q6NUQ1 792 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 MLKLQ8NB16 471 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 CD99L2Q8TCZ2 262 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 SEPT1Q8WYJ6 367 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 EMID1Q96A84 441 aaPredicted RBP11.86□□□□□ -0.51
CPNE3-212ENST00000621783 PCYT2Q99447 389 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 BPIFA3Q9BQP9 254 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 REEP2Q9BRK0 252 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 NAT10Q9H0A0 1025 aaKnown RBP11.86□□□□□ -0.51
CPNE3-212ENST00000621783 ANKEF1Q9NU02 776 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 SAGE1Q9NXZ1 904 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 SEPT9Q9UHD8 586 aaPredicted RBP11.86□□□□□ -0.51
CPNE3-212ENST00000621783 DACH1Q9UI36 760 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 GDAQ9Y2T3 454 aa11.86□□□□□ -0.51
CPNE3-212ENST00000621783 GPR25O00155 361 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 ADCY6O43306 1168 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 LGR5O75473 907 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 ZNF865P0CJ78 1059 aaPredicted RBP11.85□□□□□ -0.51
CPNE3-212ENST00000621783 XRCC6P12956 609 aaKnown RBP eCLIP11.85□□□□□ -0.51
CPNE3-212ENST00000621783 XRCC5P13010 732 aaKnown RBP11.85□□□□□ -0.51
CPNE3-212ENST00000621783 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
CPNE3-212ENST00000621783 SMPD1P17405 629 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 FLT3LGP49771 235 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 MRE11P49959 708 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 EHHADHQ08426 723 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 RAD51AP2Q09MP3 1159 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 LAMC2Q13753 1193 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 GIT2Q14161 759 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 IQCB1Q15051 598 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 CCDC144BQ3MJ40 725 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 DUSP28Q4G0W2 176 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 UTP14CQ5TAP6 766 aaKnown RBP11.85□□□□□ -0.51
CPNE3-212ENST00000621783 C1orf186Q6ZWK4 172 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 ANO5Q75V66 913 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 LUZP1Q86V48 1076 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 DHX40Q8IX18 779 aaKnown RBP11.85□□□□□ -0.51
CPNE3-212ENST00000621783 CCDC65Q8IXS2 484 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 AOPEPQ8N6M6 819 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 AFAP1L1Q8TED9 768 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 CCDC43Q96MW1 224 aaKnown RBP11.85□□□□□ -0.51
CPNE3-212ENST00000621783 PANK4Q9NVE7 773 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 KCND2Q9NZV8 630 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 MAFBQ9Y5Q3 323 aaPredicted RBP11.85□□□□□ -0.51
CPNE3-212ENST00000621783 EMSYQ7Z589 1322 aa11.85□□□□□ -0.51
CPNE3-212ENST00000621783 RSPH10B2B2RC85 870 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 PPP1R3GB7ZBB8 358 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 NKRFO15226 690 aaKnown RBP eCLIP11.84□□□□□ -0.51
CPNE3-212ENST00000621783 USO1O60763 962 aaKnown RBP11.84□□□□□ -0.51
CPNE3-212ENST00000621783 TBCAO75347 108 aaKnown RBP11.84□□□□□ -0.51
CPNE3-212ENST00000621783 OATP04181 439 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 RSPH10BP0C881 870 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 HSPA6P17066 643 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 ATP4AP20648 1035 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 GUCY2CP25092 1073 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 XKR9Q5GH70 373 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 XKR3Q5GH77 459 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 L1TD1Q5T7N2 865 aaKnown RBP11.84□□□□□ -0.51
CPNE3-212ENST00000621783 IQSEC1Q6DN90 963 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 PADI6Q6TGC4 694 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 TRMT1LQ7Z2T5 733 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms