RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 SLC16A3O15427 465 aaKnown RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 TGFB1I1O43294 461 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 RAD51CO43502 376 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 BUB1O43683 1085 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 AKR1B10O60218 316 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 USO1O60763 962 aaKnown RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 PHACTR2O75167 634 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 PPFIA4O75335 1185 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 PALMO75781 387 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 PSMD10O75832 226 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 PPP1R37O75864 691 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 AKAP3O75969 853 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 KIF4AO95239 1232 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 IPO7O95373 1038 aaKnown RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 GDF11O95390 407 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 EYA4O95677 639 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 FGFR1OPO95684 399 aaKnown RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 GNA14O95837 355 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 FTCDO95954 541 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 CPP00450 1065 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 AFPP02771 609 aaKnown RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 HLA-DOAP06340 250 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 GLI1P08151 1106 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 FAM153BP0C7A2 387 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 UCHL3P15374 230 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 SLC9A1P19634 815 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 NR2F2P24468 414 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 PON1P27169 355 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 ANXA13P27216 316 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 CXCR5P32302 372 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 HSPA9P38646 679 aaKnown RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 TNNT3P45378 269 aaPredicted RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 CARSP49589 748 aaKnown RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 ZNF131P52739 623 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 MRPL12P52815 198 aaKnown RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 CACNB3P54284 484 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 SNAP25P60880 206 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 ERVK-9P63128 1117 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 MRPS25P82663 173 aaKnown RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 SLC7A5Q01650 507 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 POU5F1Q01860 360 aaKnown RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 GHRHRQ02643 423 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 RASSF7Q02833 373 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 PTK2Q05397 1052 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 KCNA1Q09470 495 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 KCNH2Q12809 1159 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 MAPK7Q13164 816 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 GPS2Q13227 327 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 SF3B2Q13435 895 aaKnown RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 RAPGEF1Q13905 1077 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 TRADDQ15628 312 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 UAP1Q16222 522 aaPredicted RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 ASIC2Q16515 512 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 DOK7Q18PE1 504 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 FAM153CQ494X1 144 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 GLE1Q53GS7 698 aaKnown RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 TDRD12Q587J7 1177 aaKnown RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 SYDE2Q5VT97 1194 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 DCAF12L1Q5VU92 463 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 SLFN13Q68D06 897 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 IQCEQ6IPM2 695 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 SLC30A10Q6XR72 485 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 TMEM179Q6ZVK1 233 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 C1orf186Q6ZWK4 172 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 SND1Q7KZF4 910 aaKnown RBP eCLIP3.55□□□□□ -1.84
U1.39-201ENST00000621562 COL23A1Q86Y22 540 aaPredicted RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 DNAAF5Q86Y56 855 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 CD302Q8IX05 232 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 SLFN12Q8IYM2 578 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 IQCKQ8N0W5 287 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 DAW1Q8N136 415 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 RASGEF1CQ8N431 466 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 ANKRD13CQ8N6S4 541 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 FAM133AQ8N9E0 248 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 USP38Q8NB14 1042 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 BANK1Q8NDB2 785 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 C1orf131Q8NDD1 294 aaKnown RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 TPCN2Q8NHX9 752 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 SLC30A5Q8TAD4 765 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 CAGE1Q8TC20 777 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 SCFD2Q8WU76 684 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 C7orf43Q8WVR3 580 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 SEC14L1Q92503 715 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 TBC1D5Q92609 795 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 SLC5A5Q92911 643 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 CCDC102AQ96A19 550 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 DRC1Q96MC2 740 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 PCMTD1Q96MG8 357 aaPredicted RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 FAM20AQ96MK3 541 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 GDAP1L1Q96MZ0 367 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 ZIM3Q96PE6 472 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 NOX5Q96PH1 765 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 ALS2CR12Q96Q35 445 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 CRACR2AQ9BSW2 395 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 NEUROG2Q9H2A3 272 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 IKZF4Q9H2S9 585 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 ACBD3Q9H3P7 528 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 GOLPH3Q9H4A6 298 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 JADE2Q9NQC1 790 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 OLFML3Q9NRN5 406 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms