RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 MTHFD1LQ6UB35 978 aa23.27■■□□□ 1.32
SMC6-210ENST00000621152 SUGCTQ9HAC7 445 aa23.27■■□□□ 1.32
SMC6-210ENST00000621152 PCDHA4Q9UN74 947 aa23.27■■□□□ 1.32
SMC6-210ENST00000621152 PTPRSQ13332 1948 aa23.26■■□□□ 1.31
SMC6-210ENST00000621152 LPXNO60711 386 aa23.26■■□□□ 1.31
SMC6-210ENST00000621152 KLRC1P26715 233 aa23.26■■□□□ 1.31
SMC6-210ENST00000621152 ZNF746Q6NUN9 644 aaPredicted RBP23.26■■□□□ 1.31
SMC6-210ENST00000621152 CCDC60Q8IWA6 550 aaPredicted RBP23.26■■□□□ 1.31
SMC6-210ENST00000621152 ATP8B4Q8TF62 1192 aa23.26■■□□□ 1.31
SMC6-210ENST00000621152 ATXN2LQ8WWM7 1075 aaKnown RBP23.26■■□□□ 1.31
SMC6-210ENST00000621152 SYMPKQ92797 1274 aaKnown RBP23.26■■□□□ 1.31
SMC6-210ENST00000621152 THEGQ9P2T0 379 aa23.26■■□□□ 1.31
SMC6-210ENST00000621152 ENPP3O14638 875 aa23.25■■□□□ 1.31
SMC6-210ENST00000621152 TJAP1Q5JTD0 557 aa23.25■■□□□ 1.31
SMC6-210ENST00000621152 TRMT1LQ7Z2T5 733 aaKnown RBP23.25■■□□□ 1.31
SMC6-210ENST00000621152 CKAP2LQ8IYA6 745 aa23.25■■□□□ 1.31
SMC6-210ENST00000621152 NME8Q8N427 588 aa23.25■■□□□ 1.31
SMC6-210ENST00000621152 AIFM3Q96NN9 605 aa23.25■■□□□ 1.31
SMC6-210ENST00000621152 YME1L1Q96TA2 773 aa23.25■■□□□ 1.31
SMC6-210ENST00000621152 SLKQ9H2G2 1235 aaPredicted RBP23.25■■□□□ 1.31
SMC6-210ENST00000621152 TCEAL9Q9UHQ7 104 aa23.25■■□□□ 1.31
SMC6-210ENST00000621152 PCDHA10Q9Y5I2 948 aa23.25■■□□□ 1.31
SMC6-210ENST00000621152 A0A0C4DFX4 3053 aa23.24■■□□□ 1.31
SMC6-210ENST00000621152 SMIM35A0A1B0GVV1 85 aa23.24■■□□□ 1.31
SMC6-210ENST00000621152 M0QZ92 97 aa23.24■■□□□ 1.31
SMC6-210ENST00000621152 PSAPP07602 524 aa23.24■■□□□ 1.31
SMC6-210ENST00000621152 ATP4AP20648 1035 aa23.24■■□□□ 1.31
SMC6-210ENST00000621152 MRPS5P82675 430 aaKnown RBP23.24■■□□□ 1.31
SMC6-210ENST00000621152 KRT76Q01546 638 aa23.24■■□□□ 1.31
SMC6-210ENST00000621152 ZNF484Q5JVG2 852 aa23.24■■□□□ 1.31
SMC6-210ENST00000621152 SMAP1Q8IYB5 467 aaPredicted RBP23.24■■□□□ 1.31
SMC6-210ENST00000621152 BLIDQ8IZY5 108 aa23.24■■□□□ 1.31
SMC6-210ENST00000621152 TBCKQ8TEA7 893 aa23.24■■□□□ 1.31
SMC6-210ENST00000621152 LENG9Q96B70 501 aa23.24■■□□□ 1.31
SMC6-210ENST00000621152 CELF4Q9BZC1 486 aaKnown RBP23.24■■□□□ 1.31
SMC6-210ENST00000621152 C22orf23Q9BZE7 217 aa23.24■■□□□ 1.31
SMC6-210ENST00000621152 AGO3Q9H9G7 860 aaKnown RBP23.24■■□□□ 1.31
SMC6-210ENST00000621152 TPCN1Q9ULQ1 816 aa23.24■■□□□ 1.31
SMC6-210ENST00000621152 SAMM50Q9Y512 469 aa23.24■■□□□ 1.31
SMC6-210ENST00000621152 TRPV2Q9Y5S1 764 aa23.24■■□□□ 1.31
SMC6-210ENST00000621152 EYSQ5T1H1 3165 aa23.24■■□□□ 1.31
SMC6-210ENST00000621152 MSH4O15457 936 aa23.23■■□□□ 1.31
SMC6-210ENST00000621152 ANAPC15P60006 121 aa23.23■■□□□ 1.31
SMC6-210ENST00000621152 SCRN1Q12765 414 aa23.23■■□□□ 1.31
SMC6-210ENST00000621152 TSHZ1Q6ZSZ6 1077 aa23.23■■□□□ 1.31
SMC6-210ENST00000621152 SP7Q8TDD2 431 aaPredicted RBP23.23■■□□□ 1.31
SMC6-210ENST00000621152 GDPD5Q8WTR4 605 aa23.23■■□□□ 1.31
SMC6-210ENST00000621152 ASB2Q96Q27 587 aa23.23■■□□□ 1.31
SMC6-210ENST00000621152 C17orf80Q9BSJ5 609 aa23.23■■□□□ 1.31
SMC6-210ENST00000621152 GABBR1Q9UBS5 961 aa23.23■■□□□ 1.31
SMC6-210ENST00000621152 MAFBQ9Y5Q3 323 aaPredicted RBP23.23■■□□□ 1.31
SMC6-210ENST00000621152 SQORQ9Y6N5 450 aa23.23■■□□□ 1.31
SMC6-210ENST00000621152 CD52P31358 61 aa23.22■■□□□ 1.31
SMC6-210ENST00000621152 GALNT17Q6IS24 598 aa23.22■■□□□ 1.31
SMC6-210ENST00000621152 BBXQ8WY36 941 aaPredicted RBP23.22■■□□□ 1.31
SMC6-210ENST00000621152 IL17RAQ96F46 866 aa23.22■■□□□ 1.31
SMC6-210ENST00000621152 LMCD1Q9NZU5 365 aa23.22■■□□□ 1.31
SMC6-210ENST00000621152 PFKFB2O60825 505 aa23.21■■□□□ 1.31
SMC6-210ENST00000621152 CDKL5O76039 1030 aa23.21■■□□□ 1.31
SMC6-210ENST00000621152 KIAA0319LQ8IZA0 1049 aa23.21■■□□□ 1.31
SMC6-210ENST00000621152 FBXO22Q8NEZ5 403 aa23.21■■□□□ 1.31
SMC6-210ENST00000621152 PADI3Q9ULW8 664 aa23.21■■□□□ 1.31
SMC6-210ENST00000621152 KCNJ14Q9UNX9 436 aa23.21■■□□□ 1.31
SMC6-210ENST00000621152 UNC80Q8N2C7 3258 aa23.2■■□□□ 1.3
SMC6-210ENST00000621152 COL1A2P08123 1366 aa23.2■■□□□ 1.3
SMC6-210ENST00000621152 M0R2N6 131 aa23.2■■□□□ 1.3
SMC6-210ENST00000621152 GAS7O60861 476 aa23.2■■□□□ 1.3
SMC6-210ENST00000621152 DTNBO60941 627 aa23.2■■□□□ 1.3
SMC6-210ENST00000621152 CENPBP07199 599 aaPredicted RBP23.2■■□□□ 1.3
SMC6-210ENST00000621152 RTN4RL1Q86UN2 441 aaPredicted RBP23.2■■□□□ 1.3
SMC6-210ENST00000621152 FAM177A1Q8N128 213 aaPredicted RBP23.2■■□□□ 1.3
SMC6-210ENST00000621152 DAGLBQ8NCG7 672 aa23.2■■□□□ 1.3
SMC6-210ENST00000621152 SLC5A5Q92911 643 aa23.2■■□□□ 1.3
SMC6-210ENST00000621152 GJA10Q969M2 543 aa23.2■■□□□ 1.3
SMC6-210ENST00000621152 RIT2Q99578 217 aa23.2■■□□□ 1.3
SMC6-210ENST00000621152 DISC1Q9NRI5 854 aa23.2■■□□□ 1.3
SMC6-210ENST00000621152 GINS2Q9Y248 185 aa23.2■■□□□ 1.3
SMC6-210ENST00000621152 CYP3A7-CYP3A51PA0A087WV96 503 aa23.19■■□□□ 1.3
SMC6-210ENST00000621152 WDR64B1ANS9 1081 aa23.19■■□□□ 1.3
SMC6-210ENST00000621152 ZBTB42B2RXF5 422 aa23.19■■□□□ 1.3
SMC6-210ENST00000621152 CYP3A7P24462 503 aa23.19■■□□□ 1.3
SMC6-210ENST00000621152 AK2P54819 239 aa23.19■■□□□ 1.3
SMC6-210ENST00000621152 ANKRD1Q15327 319 aa23.19■■□□□ 1.3
SMC6-210ENST00000621152 NPY5RQ15761 445 aa23.19■■□□□ 1.3
SMC6-210ENST00000621152 Q4G0T1 1027 aa23.19■■□□□ 1.3
SMC6-210ENST00000621152 EPC2Q52LR7 807 aa23.19■■□□□ 1.3
SMC6-210ENST00000621152 SAMD11Q96NU1 681 aa23.19■■□□□ 1.3
SMC6-210ENST00000621152 CDHR5Q9HBB8 845 aa23.19■■□□□ 1.3
SMC6-210ENST00000621152 NRBP2Q9NSY0 501 aa23.19■■□□□ 1.3
SMC6-210ENST00000621152 MICAL3Q7RTP6 2002 aa23.19■■□□□ 1.3
SMC6-210ENST00000621152 PRUNE2Q8WUY3 3088 aa23.19■■□□□ 1.3
SMC6-210ENST00000621152 CHD7Q9P2D1 2997 aa23.19■■□□□ 1.3
SMC6-210ENST00000621152 IGSF9BQ9UPX0 1349 aa23.18■■□□□ 1.3
SMC6-210ENST00000621152 KDM3AQ9Y4C1 1321 aa23.18■■□□□ 1.3
SMC6-210ENST00000621152 CHMP2AO43633 222 aa23.18■■□□□ 1.3
SMC6-210ENST00000621152 TFF2Q03403 129 aa23.18■■□□□ 1.3
SMC6-210ENST00000621152 NFX1Q12986 1120 aaKnown RBP23.18■■□□□ 1.3
SMC6-210ENST00000621152 PAK2Q13177 524 aa23.18■■□□□ 1.3
SMC6-210ENST00000621152 NONOQ15233 471 aaKnown RBP eCLIP23.18■■□□□ 1.3
SMC6-210ENST00000621152 LRCH2Q5VUJ6 765 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms