RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 ZNF652Q9Y2D9 606 aa4.85□□□□□ -1.63
LRRC39-204ENST00000620882 PITPNM2Q9BZ72 1349 aa4.85□□□□□ -1.63
LRRC39-204ENST00000620882 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.84□□□□□ -1.63
LRRC39-204ENST00000620882 ANO9A1A5B4 782 aa4.84□□□□□ -1.63
LRRC39-204ENST00000620882 SLC27A2O14975 620 aa4.84□□□□□ -1.63
LRRC39-204ENST00000620882 PIP5K1CO60331 668 aa4.84□□□□□ -1.63
LRRC39-204ENST00000620882 NDUFS2O75306 463 aa4.84□□□□□ -1.63
LRRC39-204ENST00000620882 USP2O75604 605 aaPredicted RBP4.84□□□□□ -1.63
LRRC39-204ENST00000620882 POU2F2P09086 479 aa4.84□□□□□ -1.63
LRRC39-204ENST00000620882 HTR3AP46098 478 aa4.84□□□□□ -1.63
LRRC39-204ENST00000620882 FOXD4Q12950 439 aaPredicted RBP4.84□□□□□ -1.63
LRRC39-204ENST00000620882 TUSC3Q13454 348 aa4.84□□□□□ -1.63
LRRC39-204ENST00000620882 FSCN1Q16658 493 aaKnown RBP4.84□□□□□ -1.63
LRRC39-204ENST00000620882 INO80DQ53TQ3 878 aaPredicted RBP4.84□□□□□ -1.63
LRRC39-204ENST00000620882 SWSAP1Q6NVH7 229 aa4.84□□□□□ -1.63
LRRC39-204ENST00000620882 CCDC62Q6P9F0 684 aa4.84□□□□□ -1.63
LRRC39-204ENST00000620882 LYSMD2Q8IV50 215 aa4.84□□□□□ -1.63
LRRC39-204ENST00000620882 UHMK1Q8TAS1 419 aaKnown RBP4.84□□□□□ -1.63
LRRC39-204ENST00000620882 RIN2Q8WYP3 895 aaPredicted RBP4.84□□□□□ -1.63
LRRC39-204ENST00000620882 HPS3Q969F9 1004 aa4.84□□□□□ -1.63
LRRC39-204ENST00000620882 RSAD1Q9HA92 442 aa4.84□□□□□ -1.63
LRRC39-204ENST00000620882 RXFP1Q9HBX9 757 aa4.84□□□□□ -1.63
LRRC39-204ENST00000620882 TERF2IPQ9NYB0 399 aa4.84□□□□□ -1.63
LRRC39-204ENST00000620882 ADAMTS8Q9UP79 889 aa4.84□□□□□ -1.63
LRRC39-204ENST00000620882 SIT1Q9Y3P8 196 aa4.84□□□□□ -1.63
LRRC39-204ENST00000620882 RPS6KL1Q9Y6S9 549 aa4.84□□□□□ -1.63
LRRC39-204ENST00000620882 FADS2P1A8MWK0 482 aa4.84□□□□□ -1.64
LRRC39-204ENST00000620882 NTRK1P04629 796 aa4.84□□□□□ -1.64
LRRC39-204ENST00000620882 U2AF1L5P0DN76 240 aaPredicted RBP4.84□□□□□ -1.64
LRRC39-204ENST00000620882 HSPA6P17066 643 aa4.84□□□□□ -1.64
LRRC39-204ENST00000620882 PTPN1P18031 435 aaKnown RBP4.84□□□□□ -1.64
LRRC39-204ENST00000620882 GTF2A2P52657 109 aa4.84□□□□□ -1.64
LRRC39-204ENST00000620882 ZNF280AP59817 542 aaPredicted RBP4.84□□□□□ -1.64
LRRC39-204ENST00000620882 CCT2P78371 535 aaKnown RBP4.84□□□□□ -1.64
LRRC39-204ENST00000620882 U2AF1Q01081 240 aaKnown RBP eCLIP4.84□□□□□ -1.64
LRRC39-204ENST00000620882 SPIRE1Q08AE8 756 aa4.84□□□□□ -1.64
LRRC39-204ENST00000620882 TRIM25Q14258 630 aaKnown RBP4.84□□□□□ -1.64
LRRC39-204ENST00000620882 TUBB8Q3ZCM7 444 aa4.84□□□□□ -1.64
LRRC39-204ENST00000620882 FRMD7Q6ZUT3 714 aa4.84□□□□□ -1.64
LRRC39-204ENST00000620882 SLCO6A1Q86UG4 719 aa4.84□□□□□ -1.64
LRRC39-204ENST00000620882 ELAC2Q9BQ52 826 aaKnown RBP4.84□□□□□ -1.64
LRRC39-204ENST00000620882 KRTAP9-8Q9BYQ0 159 aa4.84□□□□□ -1.64
LRRC39-204ENST00000620882 EPB41L1Q9H4G0 881 aa4.84□□□□□ -1.64
LRRC39-204ENST00000620882 SLC6A20Q9NP91 592 aa4.84□□□□□ -1.64
LRRC39-204ENST00000620882 STOML1Q9UBI4 398 aa4.84□□□□□ -1.64
LRRC39-204ENST00000620882 PUF60Q9UHX1 559 aaKnown RBP4.84□□□□□ -1.64
LRRC39-204ENST00000620882 GPR45Q9Y5Y3 372 aa4.84□□□□□ -1.64
LRRC39-204ENST00000620882 HIP1RO75146 1068 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 OFD1O75665 1012 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 DGKIO75912 1065 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 ALDH2P05091 517 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 MMEP08473 750 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 PHKG2P15735 406 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 KIF23Q02241 960 aaPredicted RBP4.83□□□□□ -1.64
LRRC39-204ENST00000620882 ADCY1Q08828 1119 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 LONRF1Q17RB8 773 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 UAP1L1Q3KQV9 507 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 TTLL7Q6ZT98 887 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 KCTD1Q719H9 257 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 SRLQ86TD4 932 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 CD163Q86VB7 1156 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 BEND7Q8N7W2 519 aaPredicted RBP4.83□□□□□ -1.64
LRRC39-204ENST00000620882 PANK1Q8TE04 598 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 TSPEARQ8WU66 669 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 CLEC4DQ8WXI8 215 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 ERCC4Q92889 916 aaPredicted RBP4.83□□□□□ -1.64
LRRC39-204ENST00000620882 GJA10Q969M2 543 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 NACC1Q96RE7 527 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 LRFN3Q9BTN0 628 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 BHMT2Q9H2M3 363 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 TMPRSS11EQ9UL52 423 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 LIMCH1Q9UPQ0 1083 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 POLHQ9Y253 713 aa4.83□□□□□ -1.64
LRRC39-204ENST00000620882 PRSS38A1L453 326 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 NOTOA8MTQ0 251 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 ACOT7O00154 380 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 PIK3R2O00459 728 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 BUB1BO60566 1050 aaPredicted RBP4.82□□□□□ -1.64
LRRC39-204ENST00000620882 NBNO60934 754 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 CLASP2O75122 1294 aaKnown RBP4.82□□□□□ -1.64
LRRC39-204ENST00000620882 C4BPAP04003 597 aaKnown RBP4.82□□□□□ -1.64
LRRC39-204ENST00000620882 EDNRBP24530 442 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 ALDH5A1P51649 535 aaPredicted RBP4.82□□□□□ -1.64
LRRC39-204ENST00000620882 CLCN7P51798 805 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 RALBP1Q15311 655 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 CC2D1AQ6P1N0 951 aaPredicted RBP4.82□□□□□ -1.64
LRRC39-204ENST00000620882 THAP5Q7Z6K1 395 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 FOXRED1Q96CU9 486 aaPredicted RBP4.82□□□□□ -1.64
LRRC39-204ENST00000620882 MAP6Q96JE9 813 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 SCYL1Q96KG9 808 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.82□□□□□ -1.64
LRRC39-204ENST00000620882 RNF38Q9H0F5 515 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 KCNH7Q9NS40 1196 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 C1orf112Q9NSG2 853 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 GNL3LQ9NVN8 582 aaKnown RBP4.82□□□□□ -1.64
LRRC39-204ENST00000620882 KLHL11Q9NVR0 708 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 IMPACTQ9P2X3 320 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 PNMA2Q9UL42 364 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 RAXQ9Y2V3 346 aa4.82□□□□□ -1.64
LRRC39-204ENST00000620882 ATP23Q9Y6H3 246 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms