RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 TUFT1Q9NNX1 390 aa15.32■□□□□ 0.04
CBWD1-226ENST00000618061 ARGLU1Q9NWB6 273 aaPredicted RBP15.32■□□□□ 0.04
CBWD1-226ENST00000618061 HACL1Q9UJ83 578 aa15.32■□□□□ 0.04
CBWD1-226ENST00000618061 SALL4Q9UJQ4 1053 aa15.32■□□□□ 0.04
CBWD1-226ENST00000618061 PLA2G6O60733 806 aa15.32■□□□□ 0.04
CBWD1-226ENST00000618061 FLOT1O75955 427 aa15.32■□□□□ 0.04
CBWD1-226ENST00000618061 ZRANB2O95218 330 aaKnown RBP eCLIP15.32■□□□□ 0.04
CBWD1-226ENST00000618061 GNA14O95837 355 aa15.32■□□□□ 0.04
CBWD1-226ENST00000618061 PNMA6AP0CW24 399 aaPredicted RBP15.32■□□□□ 0.04
CBWD1-226ENST00000618061 MARSP56192 900 aaKnown RBP15.32■□□□□ 0.04
CBWD1-226ENST00000618061 TGFB2P61812 414 aa15.32■□□□□ 0.04
CBWD1-226ENST00000618061 EDRF1Q3B7T1 1238 aa15.32■□□□□ 0.04
CBWD1-226ENST00000618061 TCERG1LQ5VWI1 586 aa15.32■□□□□ 0.04
CBWD1-226ENST00000618061 TRAPPC11Q7Z392 1133 aa15.32■□□□□ 0.04
CBWD1-226ENST00000618061 ZC3H3Q8IXZ2 948 aaKnown RBP15.32■□□□□ 0.04
CBWD1-226ENST00000618061 PRPF38AQ8NAV1 312 aaKnown RBP15.32■□□□□ 0.04
CBWD1-226ENST00000618061 MXRA8Q9BRK3 442 aa15.32■□□□□ 0.04
CBWD1-226ENST00000618061 LXNQ9BS40 222 aa15.32■□□□□ 0.04
CBWD1-226ENST00000618061 TRAF3IP3Q9Y228 551 aa15.32■□□□□ 0.04
CBWD1-226ENST00000618061 PCDHB13Q9Y5F0 798 aa15.32■□□□□ 0.04
CBWD1-226ENST00000618061 NR3C1P04150 777 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 EIF2AK2P19525 551 aaKnown RBP15.31■□□□□ 0.04
CBWD1-226ENST00000618061 HOXA7P31268 230 aaPredicted RBP15.31■□□□□ 0.04
CBWD1-226ENST00000618061 HSD17B4P51659 736 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 RAPGEF1Q13905 1077 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 CC2D1AQ6P1N0 951 aaPredicted RBP15.31■□□□□ 0.04
CBWD1-226ENST00000618061 FAM133AQ8N9E0 248 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 SECISBP2LQ93073 1101 aaKnown RBP15.31■□□□□ 0.04
CBWD1-226ENST00000618061 ZKSCAN4Q969J2 545 aaPredicted RBP15.31■□□□□ 0.04
CBWD1-226ENST00000618061 MMS19Q96T76 1030 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 TEKT3Q9BXF9 490 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 KCNH7Q9NS40 1196 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 CEP72Q9P209 647 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 ARMCX3Q9UH62 379 aaPredicted RBP15.31■□□□□ 0.04
CBWD1-226ENST00000618061 MYH10P35580 1976 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 ZMYM2Q9UBW7 1377 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 CTAGE15A4D2H0 777 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 TMEM150BA6NC51 233 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 TGFB1I1O43294 461 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 SASH3O75995 380 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 CTAGE8P0CG41 777 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 TNIP1Q15025 636 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 PPP4R3CPQ6ZMV5 832 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 CTAGE6Q86UF2 777 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 DNAAF5Q86Y56 855 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 CTAGE4Q8IX94 777 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 TAAR1Q96RJ0 339 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 PSMB7Q99436 277 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 DEFB129Q9H1M3 183 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 EHMT1Q9H9B1 1298 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 CNOT7Q9UIV1 285 aaKnown RBP15.31■□□□□ 0.04
CBWD1-226ENST00000618061 STK24Q9Y6E0 443 aa15.31■□□□□ 0.04
CBWD1-226ENST00000618061 WDR46O15213 610 aaKnown RBP15.3■□□□□ 0.04
CBWD1-226ENST00000618061 BUB1O43683 1085 aa15.3■□□□□ 0.04
CBWD1-226ENST00000618061 CALUO43852 315 aaPredicted RBP15.3■□□□□ 0.04
CBWD1-226ENST00000618061 VCAM1P19320 739 aa15.3■□□□□ 0.04
CBWD1-226ENST00000618061 MAGEA1P43355 309 aa15.3■□□□□ 0.04
CBWD1-226ENST00000618061 MRPS9P82933 396 aaKnown RBP15.3■□□□□ 0.04
CBWD1-226ENST00000618061 WHAMMP3Q1A5X7 153 aa15.3■□□□□ 0.04
CBWD1-226ENST00000618061 ASTE1Q2TB18 679 aaPredicted RBP15.3■□□□□ 0.04
CBWD1-226ENST00000618061 SFMBT2Q5VUG0 894 aa15.3■□□□□ 0.04
CBWD1-226ENST00000618061 TYW1Q9NV66 732 aaKnown RBP15.3■□□□□ 0.04
CBWD1-226ENST00000618061 FAM53CQ9NYF3 392 aa15.3■□□□□ 0.04
CBWD1-226ENST00000618061 SAR1BQ9Y6B6 198 aa15.3■□□□□ 0.04
CBWD1-226ENST00000618061 PDXKO00764 312 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 MYCLP12524 364 aaPredicted RBP15.29■□□□□ 0.04
CBWD1-226ENST00000618061 ZNF280AP59817 542 aaPredicted RBP15.29■□□□□ 0.04
CBWD1-226ENST00000618061 SPP2Q13103 211 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 ITGB3BPQ13352 177 aaPredicted RBP15.29■□□□□ 0.04
CBWD1-226ENST00000618061 ZNF662Q6ZS27 426 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 KRT222Q8N1A0 295 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 IQCDQ96DY2 449 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 GANQ9H2C0 597 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 RPAP3Q9H6T3 665 aaPredicted RBP15.29■□□□□ 0.04
CBWD1-226ENST00000618061 JADE2Q9NQC1 790 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 AJAP1Q9UKB5 411 aaPredicted RBP15.29■□□□□ 0.04
CBWD1-226ENST00000618061 SAMM50Q9Y512 469 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 MYH11P35749 1972 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 BRCA1P38398 1863 aaKnown RBP15.29■□□□□ 0.04
CBWD1-226ENST00000618061 FAM170AA1A519 330 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 XRCC5P13010 732 aaKnown RBP15.29■□□□□ 0.04
CBWD1-226ENST00000618061 PLA2G4AP47712 749 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 RPS6P62753 249 aaKnown RBP15.29■□□□□ 0.04
CBWD1-226ENST00000618061 SETQ01105 290 aaPredicted RBP15.29■□□□□ 0.04
CBWD1-226ENST00000618061 BMS1Q14692 1282 aaKnown RBP15.29■□□□□ 0.04
CBWD1-226ENST00000618061 EPHA7Q15375 998 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 GJB7Q6PEY0 223 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 B3GNT9Q6UX72 402 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 SYTL5Q8TDW5 730 aaPredicted RBP15.29■□□□□ 0.04
CBWD1-226ENST00000618061 NACC1Q96RE7 527 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 FIZ1Q96SL8 496 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.29■□□□□ 0.04
CBWD1-226ENST00000618061 SUGCTQ9HAC7 445 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 PARVGQ9HBI0 331 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 SLC38A10Q9HBR0 1119 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 FAM184BQ9ULE4 1060 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 RIPK3Q9Y572 518 aa15.29■□□□□ 0.04
CBWD1-226ENST00000618061 NCK2O43639 380 aa15.28■□□□□ 0.04
CBWD1-226ENST00000618061 USO1O60763 962 aaKnown RBP15.28■□□□□ 0.04
CBWD1-226ENST00000618061 LCA5LO95447 670 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms