RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 ZBTB3Q9H5J0 574 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 CD209Q9NNX6 404 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 NR1D1P20393 614 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 FANCCQ00597 558 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 CDKL2Q92772 493 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 BHMTQ93088 406 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 KPNA4O00629 521 aaPredicted RBP9.94□□□□□ -0.82
COL12A1-211ENST00000615798 IFNAR2P48551 515 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 TFCP2Q12800 502 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 SHQ1Q6PI26 577 aaKnown RBP9.94□□□□□ -0.82
COL12A1-211ENST00000615798 DTHD1Q6ZMT9 781 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 RASSF3Q86WH2 238 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 LSM14BQ9BX40 385 aaKnown RBP9.94□□□□□ -0.82
COL12A1-211ENST00000615798 ZWILCHQ9H900 591 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 KIAA1468Q9P260 1216 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 ANKIB1Q9P2G1 1089 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 TNNQ9UQP3 1299 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 SLC4A4Q9Y6R1 1079 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 P4HA2O15460 535 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 SERPINB8P50452 374 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 YWHAEP62258 255 aaKnown RBP9.94□□□□□ -0.82
COL12A1-211ENST00000615798 TP53BP2Q13625 1128 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 RAPH1Q70E73 1250 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 TBC1D4O60343 1298 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 RCAN1P53805 252 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 ZNF804AQ7Z570 1209 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 EPAS1Q99814 870 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 MID2Q9UJV3 735 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 PJA2O43164 708 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 ADCY8P40145 1251 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 TRAPPC10P48553 1259 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 SFMBT2Q5VUG0 894 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 TCAIMQ8N3R3 496 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 USP28Q96RU2 1077 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 TRPC6Q9Y210 931 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 H7C0S8 307 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 POTEFA5A3E0 1075 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 STMND1H3BQB6 276 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 BIRC3Q13489 604 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 DCAF17Q5H9S7 520 aaPredicted RBP9.93□□□□□ -0.82
COL12A1-211ENST00000615798 MTERF3Q96E29 417 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 AGBL1Q96MI9 1066 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 R3HDM2Q9Y2K5 976 aaKnown RBP9.93□□□□□ -0.82
COL12A1-211ENST00000615798 SH3TC1Q8TE82 1336 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 MECOMQ03112 1051 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 KPNB1Q14974 876 aaKnown RBP9.93□□□□□ -0.82
COL12A1-211ENST00000615798 BEND3Q5T5X7 828 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 C17orf53Q8N3J3 647 aaPredicted RBP9.93□□□□□ -0.82
COL12A1-211ENST00000615798 VCPP55072 806 aaKnown RBP9.93□□□□□ -0.82
COL12A1-211ENST00000615798 HSPA1AP0DMV8 641 aaKnown RBP9.93□□□□□ -0.82
COL12A1-211ENST00000615798 HSPA1BP0DMV9 641 aaKnown RBP9.93□□□□□ -0.82
COL12A1-211ENST00000615798 CMA1P23946 247 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 CTCFP49711 727 aaPredicted RBP9.93□□□□□ -0.82
COL12A1-211ENST00000615798 ADCY9O60503 1353 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 PNMA6EA0A0J9YXQ4 647 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 TARSL2A2RTX5 802 aaKnown RBP9.93□□□□□ -0.82
COL12A1-211ENST00000615798 PTGS2P35354 604 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 MRPS25P82663 173 aaKnown RBP9.93□□□□□ -0.82
COL12A1-211ENST00000615798 KRT79Q5XKE5 535 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 NOC4LQ9BVI4 516 aaKnown RBP9.93□□□□□ -0.82
COL12A1-211ENST00000615798 ZFP69BQ9UJL9 534 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 RNF103-CHMP3A0A140T963 221 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 H0Y3Z8 333 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 CFLARO15519 480 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 ZNF202O95125 648 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 IL10P22301 178 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 SYCP2LQ5T4T6 812 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 NAIF1Q69YI7 327 aaPredicted RBP9.93□□□□□ -0.82
COL12A1-211ENST00000615798 STKLD1Q8NE28 680 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 CBX8Q9HC52 389 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 ABCF3Q9NUQ8 709 aa9.93□□□□□ -0.82
COL12A1-211ENST00000615798 LAD1O00515 517 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 SIX6OS1Q8N1H7 587 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 MNTQ99583 582 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 CCT7Q99832 543 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 MAGEB6P1A0A0J9YX57 407 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 IQCB1Q15051 598 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 TAB1Q15750 504 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 ADCK5Q3MIX3 580 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 LPIN2Q92539 896 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 LRRC7Q96NW7 1537 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 CARMIL3Q8ND23 1372 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 GNA14O95837 355 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 MMRN1Q13201 1228 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 USF2Q15853 346 aaPredicted RBP9.92□□□□□ -0.82
COL12A1-211ENST00000615798 MAP3K20Q9NYL2 800 aaKnown RBP9.92□□□□□ -0.82
COL12A1-211ENST00000615798 STON1Q9Y6Q2 735 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 DCAF8L1A6NGE4 600 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 PPIP5K2O43314 1243 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 SEPT1Q8WYJ6 367 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 FAM200BP0CF97 657 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 GRSF1Q12849 480 aaKnown RBP eCLIP9.92□□□□□ -0.82
COL12A1-211ENST00000615798 TSTA3Q13630 321 aaPredicted RBP9.92□□□□□ -0.82
COL12A1-211ENST00000615798 BEGAINQ9BUH8 593 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 STOML2Q9UJZ1 356 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 L3MBTL1Q9Y468 752 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 TULP4Q9NRJ4 1543 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 SEMA3DO95025 777 aa9.92□□□□□ -0.82
COL12A1-211ENST00000615798 NCBP1Q09161 790 aaKnown RBP9.92□□□□□ -0.82
COL12A1-211ENST00000615798 FAM95CA0A1B0GW59 222 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms