RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 UBE2OQ9C0C9 1292 aaKnown RBP11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 FAM114A2Q9NRY5 505 aa11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 NPTXRO95502 500 aa11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 CALB2P22676 271 aa11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 NKX1-1Q15270 411 aaPredicted RBP11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 ZRSR2Q15696 482 aaKnown RBP11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 TAOK1Q7L7X3 1001 aa11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 HOMEZQ8IX15 550 aa11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 ARHGEF2Q92974 986 aaKnown RBP11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 GPR108Q9NPR9 543 aa11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 DISC1Q9NRI5 854 aa11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 PCMTD2Q9NV79 361 aa11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 SNX24Q9Y343 169 aa11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 A0A1W2PQJ5 194 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 ATP6V1C1P21283 382 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 KCNA3P22001 575 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 PEX5P50542 639 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 SLC29A2Q14542 456 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 MEI1Q5TIA1 1274 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 IFNL3Q8IZI9 196 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 TMTC2Q8N394 836 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 PIGOQ8TEQ8 1089 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 UCMAQ8WVF2 138 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 TMEM237Q96Q45 408 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 MOV10L1Q9BXT6 1211 aaKnown RBP11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 MMADHCQ9H3L0 296 aaPredicted RBP11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 RNPEPL1Q9HAU8 725 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 ARL2BPQ9Y2Y0 163 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 COPB2P35606 906 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 PMS2P54278 862 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 CENPTQ96BT3 561 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 PBKQ96KB5 322 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 STMN4Q9H169 189 aaPredicted RBP11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 CCDC87Q9NVE4 849 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 MYH6P13533 1939 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 ALADP13716 330 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 STX2P32856 288 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 ITPK1Q13572 414 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 NAB2Q15742 525 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 CATIPQ7Z7H3 387 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 FAM133AQ8N9E0 248 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 EPS8L3Q8TE67 593 aaKnown RBP11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 ANKS1AQ92625 1134 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 VCX3BQ9H321 246 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 KANSL2Q9H9L4 492 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 VCX3AQ9NNX9 186 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 USP21Q9UK80 565 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 INTUQ9ULD6 942 aa11.24□□□□□ -0.61
TNFAIP3-208ENST00000615468 TULP1O00294 542 aaPredicted RBP11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 RASGRF2O14827 1237 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 ATP6V1G1O75348 118 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 PLEKHA8P1O95397 391 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 ADD2P35612 726 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 PTDSS1P48651 473 aaKnown RBP11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 DEUP1Q05D60 604 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 SLC4A8Q2Y0W8 1093 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 MIIPQ5JXC2 388 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 SUSD4Q5VX71 490 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 PDXDC1Q6P996 788 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 ZNF365Q70YC5 407 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 FITM2Q8N6M3 262 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 ZBTB38Q8NAP3 1195 aaPredicted RBP11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 OPTNQ96CV9 577 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 CDK5RAP3Q96JB5 506 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 RNF26Q9BY78 433 aaPredicted RBP11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 GALNT8Q9NY28 637 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 MYH7BA7E2Y1 1941 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 NVLO15381 856 aaKnown RBP11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 PJA2O43164 708 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 PRKAB2O43741 272 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 SKIP12755 728 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 ECHS1P30084 290 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 CASP7P55210 303 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 BNIP1Q12981 228 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 UBE4AQ14139 1066 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 GIMAP8Q8ND71 665 aaPredicted RBP11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 RASGRP4Q8TDF6 673 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 LRRC8CQ8TDW0 803 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 STK32AQ8WU08 396 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 NDNQ99608 321 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.23□□□□□ -0.618e-7■■□□□ 14.5
TNFAIP3-208ENST00000615468 LSM14BQ9BX40 385 aaKnown RBP11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 A0A087X0T9 212 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 CCDC194A0A1B0GVG4 234 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 FGGP02679 453 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 FAM228BP0C875 321 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 UBTFL6P0CB48 400 aaPredicted RBP11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 PDE6AP16499 860 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 TARSP26639 723 aaKnown RBP11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 GSTT1P30711 240 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 C6orf118Q5T5N4 469 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 DYMQ7RTS9 669 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 APBB1IPQ7Z5R6 666 aaPredicted RBP11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 PPFIBP2Q8ND30 876 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 ZFAND2BQ8WV99 257 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 ATXN2LQ8WWM7 1075 aaKnown RBP11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 DTNBP1Q96EV8 351 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 METTL5Q9NRN9 209 aaKnown RBP11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 TXLNGQ9NUQ3 528 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 SRP68Q9UHB9 627 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms