RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 TRIM21P19474 475 aaKnown RBP24.05■■□□□ 1.44
POLR2J3-220ENST00000613744 SCP2P22307 547 aa24.05■■□□□ 1.44
POLR2J3-220ENST00000613744 TRAPPC10P48553 1259 aa24.05■■□□□ 1.44
POLR2J3-220ENST00000613744 NOVP48745 357 aa24.05■■□□□ 1.44
POLR2J3-220ENST00000613744 GUCY1A3Q02108 690 aa24.05■■□□□ 1.44
POLR2J3-220ENST00000613744 IFT88Q13099 833 aa24.05■■□□□ 1.44
POLR2J3-220ENST00000613744 MTMR2Q13614 643 aa24.05■■□□□ 1.44
POLR2J3-220ENST00000613744 LACTB2Q53H82 288 aaPredicted RBP24.05■■□□□ 1.44
POLR2J3-220ENST00000613744 ANKS1AQ92625 1134 aa24.05■■□□□ 1.44
POLR2J3-220ENST00000613744 BLZF1Q9H2G9 400 aa24.05■■□□□ 1.44
POLR2J3-220ENST00000613744 DDAH1O94760 285 aa24.04■■□□□ 1.44
POLR2J3-220ENST00000613744 ITGB3BPQ13352 177 aaPredicted RBP24.04■■□□□ 1.44
POLR2J3-220ENST00000613744 KIAA1755Q5JYT7 1200 aa24.04■■□□□ 1.44
POLR2J3-220ENST00000613744 TTC38Q5R3I4 469 aa24.04■■□□□ 1.44
POLR2J3-220ENST00000613744 LRCH2Q5VUJ6 765 aa24.04■■□□□ 1.44
POLR2J3-220ENST00000613744 CYB5D1Q6P9G0 228 aa24.04■■□□□ 1.44
POLR2J3-220ENST00000613744 SAPCD2Q86UD0 394 aa24.04■■□□□ 1.44
POLR2J3-220ENST00000613744 CCDC42Q96M95 316 aa24.04■■□□□ 1.44
POLR2J3-220ENST00000613744 FAM114A1Q8IWE2 563 aa24.04■■□□□ 1.44
POLR2J3-220ENST00000613744 FUKQ8N0W3 1084 aa24.04■■□□□ 1.44
POLR2J3-220ENST00000613744 ZNF280CQ8ND82 737 aa24.04■■□□□ 1.44
POLR2J3-220ENST00000613744 FAXDC2Q96IV6 333 aa24.04■■□□□ 1.44
POLR2J3-220ENST00000613744 TMEM88BA6NKF7 163 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 IRF6O14896 467 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 KRT14P02533 472 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 CALM1P0DP23 149 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 CALM2P0DP24 149 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 CALM3P0DP25 149 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 GJA5P36382 358 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 SLC7A5Q01650 507 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 CCDC96Q2M329 555 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 ERO1BQ86YB8 467 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 CYFIP2Q96F07 1278 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 GINM1Q9NU53 330 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 LRWD1Q9UFC0 647 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 AFG3L2Q9Y4W6 797 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 PJA2O43164 708 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 COBLO75128 1261 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 SLC8A3P57103 927 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 IRX1P78414 480 aaPredicted RBP24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 CFAP221Q4G0U5 840 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 KCTD16Q68DU8 428 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 MKL1Q969V6 931 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 ERGIC2Q96RQ1 377 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 MTRQ99707 1265 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 AS3MTQ9HBK9 375 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 AGPAT5Q9NUQ2 364 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 TMX2Q9Y320 296 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 PCDHA13Q9Y5I0 950 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 DUSP10Q9Y6W6 482 aa24.03■■□□□ 1.44
POLR2J3-220ENST00000613744 SPDYE5A6NIY4 337 aa24.02■■□□□ 1.44
POLR2J3-220ENST00000613744 USP17L10C9JJH3 530 aa24.02■■□□□ 1.44
POLR2J3-220ENST00000613744 PSMA7O14818 248 aa24.02■■□□□ 1.44
POLR2J3-220ENST00000613744 BRD2P25440 801 aaKnown RBP24.02■■□□□ 1.44
POLR2J3-220ENST00000613744 TLDC1Q6P9B6 456 aa24.02■■□□□ 1.44
POLR2J3-220ENST00000613744 EP400NLQ6ZTU2 488 aa24.02■■□□□ 1.44
POLR2J3-220ENST00000613744 PIK3R5Q8WYR1 880 aa24.02■■□□□ 1.44
POLR2J3-220ENST00000613744 TNFRSF25Q93038 417 aa24.02■■□□□ 1.44
POLR2J3-220ENST00000613744 IFIH1Q9BYX4 1025 aaKnown RBP24.02■■□□□ 1.44
POLR2J3-220ENST00000613744 RBM28Q9NW13 759 aaKnown RBP24.02■■□□□ 1.44
POLR2J3-220ENST00000613744 CAPN6Q9Y6Q1 641 aa24.02■■□□□ 1.44
POLR2J3-220ENST00000613744 PHIPQ8WWQ0 1821 aa24.02■■□□□ 1.44
POLR2J3-220ENST00000613744 C5orf60A6NFR6 353 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 F5H6K3 240 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 PRPF3O43395 683 aaKnown RBP24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 GOLGA8HP0CJ92 632 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 GHRP10912 638 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 PPP1R2P41236 205 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 HMGCS2P54868 508 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 KLRC3Q07444 240 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 XRCC4Q13426 336 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 USP17L2Q6R6M4 530 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 DHTKD1Q96HY7 919 aaPredicted RBP24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 DDX20Q9UHI6 824 aaKnown RBP24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 GRID2IPA4D2P6 1211 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 GMNCA6NCL1 334 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 E7EVH7 732 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 PLEKHA8P1O95397 391 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 ZNF157P51786 506 aaPredicted RBP24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 GRM1Q13255 1194 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 ARL6IP4Q66PJ3 421 aaKnown RBP24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 RNF10Q8N5U6 811 aaKnown RBP24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 TUBGCP2Q9BSJ2 902 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 WDR18Q9BV38 432 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 TMBIM4Q9HC24 238 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 GDAQ9Y2T3 454 aa24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 FRMPD2Q68DX3 1309 aaPredicted RBP24.01■■□□□ 1.43
POLR2J3-220ENST00000613744 GOLGA6L10A6NI86 522 aa24■■□□□ 1.43
POLR2J3-220ENST00000613744 RASSF10A6NK89 507 aa24■■□□□ 1.43
POLR2J3-220ENST00000613744 HSPA9P38646 679 aaKnown RBP24■■□□□ 1.43
POLR2J3-220ENST00000613744 PPATQ06203 517 aa24■■□□□ 1.43
POLR2J3-220ENST00000613744 TBC1D8BQ0IIM8 1120 aa24■■□□□ 1.43
POLR2J3-220ENST00000613744 PTGDRQ13258 359 aa24■■□□□ 1.43
POLR2J3-220ENST00000613744 SLFN13Q68D06 897 aa24■■□□□ 1.43
POLR2J3-220ENST00000613744 STAMQ92783 540 aa24■■□□□ 1.43
POLR2J3-220ENST00000613744 TRIM47Q96LD4 638 aa24■■□□□ 1.43
POLR2J3-220ENST00000613744 PLAGL2Q9UPG8 496 aa24■■□□□ 1.43
POLR2J3-220ENST00000613744 TLL2Q9Y6L7 1015 aa24■■□□□ 1.43
POLR2J3-220ENST00000613744 FAM205CA6NFA0 338 aa23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 ZNF263O14978 683 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms