RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 ATP2B1P20020 1258 aa14.32□□□□□ -0.12
CSTF1-208ENST00000613138 DNAJB2P25686 324 aa14.32□□□□□ -0.12
CSTF1-208ENST00000613138 MIS18BP1Q6P0N0 1132 aa14.32□□□□□ -0.12
CSTF1-208ENST00000613138 PLPPR4Q7Z2D5 763 aa14.32□□□□□ -0.12
CSTF1-208ENST00000613138 SPRED2Q7Z698 418 aa14.32□□□□□ -0.12
CSTF1-208ENST00000613138 C8orf76Q96K31 380 aa14.32□□□□□ -0.12
CSTF1-208ENST00000613138 GUCD1Q96NT3 240 aa14.32□□□□□ -0.12
CSTF1-208ENST00000613138 TEKT3Q9BXF9 490 aa14.32□□□□□ -0.12
CSTF1-208ENST00000613138 SH2B1Q9NRF2 756 aaPredicted RBP14.32□□□□□ -0.12
CSTF1-208ENST00000613138 DISC1Q9NRI5 854 aa14.32□□□□□ -0.12
CSTF1-208ENST00000613138 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.31□□□□□ -0.12
CSTF1-208ENST00000613138 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.31□□□□□ -0.12
CSTF1-208ENST00000613138 RFC2P35250 354 aa14.31□□□□□ -0.12
CSTF1-208ENST00000613138 SMAD3P84022 425 aaKnown RBP14.31□□□□□ -0.12
CSTF1-208ENST00000613138 KRT76Q01546 638 aa14.31□□□□□ -0.12
CSTF1-208ENST00000613138 MGAT3Q09327 533 aa14.31□□□□□ -0.12
CSTF1-208ENST00000613138 NBR1Q14596 966 aa14.31□□□□□ -0.12
CSTF1-208ENST00000613138 B3GNT9Q6UX72 402 aa14.31□□□□□ -0.12
CSTF1-208ENST00000613138 CKAP2LQ8IYA6 745 aa14.31□□□□□ -0.12
CSTF1-208ENST00000613138 FAM177A1Q8N128 213 aaPredicted RBP14.31□□□□□ -0.12
CSTF1-208ENST00000613138 BANK1Q8NDB2 785 aa14.31□□□□□ -0.12
CSTF1-208ENST00000613138 DBF4BQ8NFT6 615 aa14.31□□□□□ -0.12
CSTF1-208ENST00000613138 ATP8B4Q8TF62 1192 aa14.31□□□□□ -0.12
CSTF1-208ENST00000613138 LLPHQ9BRT6 129 aaKnown RBP14.31□□□□□ -0.12
CSTF1-208ENST00000613138 NKX2-4Q9H2Z4 354 aa14.31□□□□□ -0.12
CSTF1-208ENST00000613138 UPF2Q9HAU5 1272 aaKnown RBP14.31□□□□□ -0.12
CSTF1-208ENST00000613138 KCNMB3Q9NPA1 279 aa14.31□□□□□ -0.12
CSTF1-208ENST00000613138 MTMR10Q9NXD2 777 aa14.31□□□□□ -0.12
CSTF1-208ENST00000613138 VAV3Q9UKW4 847 aa14.31□□□□□ -0.12
CSTF1-208ENST00000613138 PCDHA10Q9Y5I2 948 aa14.31□□□□□ -0.12
CSTF1-208ENST00000613138 MAFBQ9Y5Q3 323 aaPredicted RBP14.31□□□□□ -0.12
CSTF1-208ENST00000613138 SLC4A7Q9Y6M7 1214 aa14.31□□□□□ -0.12
CSTF1-208ENST00000613138 IGSF9BQ9UPX0 1349 aa14.31□□□□□ -0.12
CSTF1-208ENST00000613138 ARID2Q68CP9 1835 aa14.3□□□□□ -0.12
CSTF1-208ENST00000613138 WDR64B1ANS9 1081 aa14.3□□□□□ -0.12
CSTF1-208ENST00000613138 PSAPP07602 524 aa14.3□□□□□ -0.12
CSTF1-208ENST00000613138 GHRP10912 638 aa14.3□□□□□ -0.12
CSTF1-208ENST00000613138 GNAT1P11488 350 aa14.3□□□□□ -0.12
CSTF1-208ENST00000613138 KLRC1P26715 233 aa14.3□□□□□ -0.12
CSTF1-208ENST00000613138 WDR5P61964 334 aaKnown RBP14.3□□□□□ -0.12
CSTF1-208ENST00000613138 FAM160B1Q5W0V3 765 aa14.3□□□□□ -0.12
CSTF1-208ENST00000613138 FAM117BQ6P1L5 589 aa14.3□□□□□ -0.12
CSTF1-208ENST00000613138 MTHFD1LQ6UB35 978 aa14.3□□□□□ -0.12
CSTF1-208ENST00000613138 MOXD1Q6UVY6 613 aa14.3□□□□□ -0.12
CSTF1-208ENST00000613138 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.3□□□□□ -0.12
CSTF1-208ENST00000613138 MIER3Q7Z3K6 550 aa14.3□□□□□ -0.12
CSTF1-208ENST00000613138 ZNF668Q96K58 619 aaPredicted RBP14.3□□□□□ -0.12
CSTF1-208ENST00000613138 RIT2Q99578 217 aa14.3□□□□□ -0.12
CSTF1-208ENST00000613138 TMEM60Q9H2L4 133 aa14.3□□□□□ -0.12
CSTF1-208ENST00000613138 SEMA6BQ9H3T3 888 aa14.3□□□□□ -0.12
CSTF1-208ENST00000613138 CDHR5Q9HBB8 845 aa14.3□□□□□ -0.12
CSTF1-208ENST00000613138 WRAP73Q9P2S5 460 aaPredicted RBP14.3□□□□□ -0.12
CSTF1-208ENST00000613138 TCEAL9Q9UHQ7 104 aa14.3□□□□□ -0.12
CSTF1-208ENST00000613138 CDY2AQ9Y6F7 541 aa14.3□□□□□ -0.12
CSTF1-208ENST00000613138 ST18O60284 1047 aa14.29□□□□□ -0.12
CSTF1-208ENST00000613138 STBD1O95210 358 aa14.29□□□□□ -0.12
CSTF1-208ENST00000613138 ATP2A2P16615 1042 aaKnown RBP14.29□□□□□ -0.12
CSTF1-208ENST00000613138 PRKCEQ02156 737 aa14.29□□□□□ -0.12
CSTF1-208ENST00000613138 TRIM29Q14134 588 aa14.29□□□□□ -0.12
CSTF1-208ENST00000613138 ZNF697Q5TEC3 545 aa14.29□□□□□ -0.12
CSTF1-208ENST00000613138 PPP4R3AQ6IN85 833 aa14.29□□□□□ -0.12
CSTF1-208ENST00000613138 CNKSR3Q6P9H4 555 aa14.29□□□□□ -0.12
CSTF1-208ENST00000613138 SMAP1Q8IYB5 467 aaPredicted RBP14.29□□□□□ -0.12
CSTF1-208ENST00000613138 BRMS1Q9HCU9 246 aa14.29□□□□□ -0.12
CSTF1-208ENST00000613138 PRUNE2Q8WUY3 3088 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 LCHNA4D1U4 455 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 RRN3P2A6NIE6 340 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 ZBTB39O15060 712 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 HBP1O60381 514 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 C22orf31O95567 290 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 PFKMP08237 780 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 CLCN3P51790 818 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 MKRN4PQ13434 485 aaPredicted RBP14.28□□□□□ -0.12
CSTF1-208ENST00000613138 LPIN1Q14693 890 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 GRIN2CQ14957 1233 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 PLEKHG4Q58EX7 1191 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 FAM26DQ5JW98 314 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 PLA2G4FQ68DD2 849 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 LRRC71Q8N4P6 559 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 FAM184AQ8NB25 1140 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 FBXO18Q8NFZ0 1043 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 TIFAQ96CG3 184 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 AGO3Q9H9G7 860 aaKnown RBP14.28□□□□□ -0.12
CSTF1-208ENST00000613138 PCDHA2Q9Y5H9 948 aa14.28□□□□□ -0.12
CSTF1-208ENST00000613138 REV3LO60673 3130 aa14.27□□□□□ -0.12
CSTF1-208ENST00000613138 A0A087WWV3 80 aa14.27□□□□□ -0.13
CSTF1-208ENST00000613138 VTNP04004 478 aa14.27□□□□□ -0.13
CSTF1-208ENST00000613138 OATP04181 439 aa14.27□□□□□ -0.13
CSTF1-208ENST00000613138 ACTN1P12814 892 aa14.27□□□□□ -0.13
CSTF1-208ENST00000613138 GJB2P29033 226 aa14.27□□□□□ -0.13
CSTF1-208ENST00000613138 MCM7P33993 719 aa14.27□□□□□ -0.13
CSTF1-208ENST00000613138 JAK3P52333 1124 aa14.27□□□□□ -0.13
CSTF1-208ENST00000613138 MRPS6P82932 125 aaKnown RBP14.27□□□□□ -0.13
CSTF1-208ENST00000613138 HMGN5P82970 282 aaKnown RBP14.27□□□□□ -0.13
CSTF1-208ENST00000613138 SPIRE1Q08AE8 756 aa14.27□□□□□ -0.13
CSTF1-208ENST00000613138 DRP2Q13474 957 aa14.27□□□□□ -0.13
CSTF1-208ENST00000613138 ZNF174Q15697 407 aa14.27□□□□□ -0.13
CSTF1-208ENST00000613138 TMEM266Q2M3C6 531 aa14.27□□□□□ -0.13
CSTF1-208ENST00000613138 NCAPH2Q6IBW4 605 aa14.27□□□□□ -0.13
CSTF1-208ENST00000613138 TAF2Q6P1X5 1199 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms