RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 SFR1Q86XK3 245 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 MMGT1Q8N4V1 131 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 HAUS1Q96CS2 278 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 NOL3O60936 208 aaKnown RBP11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 ALAS1P13196 640 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 SNX1Q13596 522 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 TMED2Q15363 201 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 DOK7Q18PE1 504 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 LRIG3Q6UXM1 1119 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 CAPN12Q6ZSI9 719 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 TUBB6Q9BUF5 446 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 MIS12Q9H081 205 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 NOC2LQ9Y3T9 749 aaKnown RBP11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 E9PMD0 336 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 KRT19P08727 400 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 RPSAP08865 295 aaKnown RBP11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 BEND6Q5SZJ8 279 aaPredicted RBP11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 NOA1Q8NC60 698 aaKnown RBP11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 CCPG1Q9ULG6 757 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 HNRNPDLO14979 420 aaKnown RBP11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 PPP1R37O75864 691 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 PMS2P54278 862 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 RPAINQ86UA6 219 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 STAG2Q8N3U4 1231 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 AFAP1L2Q8N4X5 818 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 PPP4R1Q8TF05 950 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 EPN3Q9H201 632 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 AGPAT5Q9NUQ2 364 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 TRIM10Q9UDY6 481 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 CNTNAP5Q8WYK1 1306 aa11.79□□□□□ -0.52
CDC42EP3-206ENST00000611976 LRRD1A4D1F6 860 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 RFX1P22670 979 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 GRIN1Q05586 938 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 KAZNQ674X7 775 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 FRMD5Q7Z6J6 570 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 N4BP2L2Q92802 583 aaPredicted RBP11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 FAM84BQ96KN1 310 aaPredicted RBP11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 FAM20AQ96MK3 541 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 TMEM260Q9NX78 707 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 C1orf167Q5SNV9 1468 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 NOP56O00567 594 aaKnown RBP11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 CHRNA3P32297 505 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 PSMC4P43686 418 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 SLC18A3Q16572 532 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 TRIM42Q8IWZ5 723 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 DDX47Q9H0S4 455 aaKnown RBP11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 PCIF1Q9H4Z3 704 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 SNX24Q9Y343 169 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 MEFVO15553 781 aaPredicted RBP11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 C12orf60Q5U649 245 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 CASC4Q6P4E1 433 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 RSRC2Q7L4I2 434 aaKnown RBP11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 NEDD1Q8NHV4 660 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 MORC4Q8TE76 937 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 NSUN4Q96CB9 384 aaKnown RBP11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 CEP95Q96GE4 821 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 ELAC2Q9BQ52 826 aaKnown RBP11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 PI4KBQ9UBF8 816 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 TNNC2P02585 160 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 STAT2P52630 851 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 CAV1Q03135 178 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 TBC1D9BQ66K14 1250 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 LARGE2Q8N3Y3 721 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 GABPB2Q8TAK5 448 aaPredicted RBP11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 FBXO41Q8TF61 875 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 ATP6V0A1Q93050 837 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 HVCN1Q96D96 273 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 SALL1Q9NSC2 1324 aa11.78□□□□□ -0.52
CDC42EP3-206ENST00000611976 MDH1P40925 334 aaKnown RBP11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 GPC5P78333 572 aa11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 DHX34Q14147 1143 aaKnown RBP11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 KRT81Q14533 505 aa11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 NUGGCQ68CJ6 796 aa11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 CYP4F22Q6NT55 531 aa11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 PNKPQ96T60 521 aa11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 DNAJC7Q99615 494 aa11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 NOP53Q9NZM5 478 aaKnown RBP11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 PCDHB4Q9Y5E5 795 aa11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 EXOC1LA0A1B0GW35 172 aa11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 SGK1O00141 431 aa11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 SLC26A4O43511 780 aa11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 TRAPPC11Q7Z392 1133 aa11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 ZBTB8OSQ8IWT0 167 aa11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 ERGIC2Q96RQ1 377 aa11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 CPVLQ9H3G5 476 aa11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 KMT5AQ9NQR1 393 aa11.77□□□□□ -0.52
CDC42EP3-206ENST00000611976 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
CDC42EP3-206ENST00000611976 POTECB2RU33 542 aa11.77□□□□□ -0.53
CDC42EP3-206ENST00000611976 RNF8O76064 485 aa11.77□□□□□ -0.53
CDC42EP3-206ENST00000611976 INHBAP08476 426 aa11.77□□□□□ -0.53
CDC42EP3-206ENST00000611976 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
CDC42EP3-206ENST00000611976 SLC44A5Q8NCS7 719 aa11.77□□□□□ -0.53
CDC42EP3-206ENST00000611976 CELF1Q92879 486 aaKnown RBP11.77□□□□□ -0.53
CDC42EP3-206ENST00000611976 CHMP6Q96FZ7 201 aa11.77□□□□□ -0.53
CDC42EP3-206ENST00000611976 DAPK3O43293 454 aa11.77□□□□□ -0.53
CDC42EP3-206ENST00000611976 GGPS1O95749 300 aa11.77□□□□□ -0.53
CDC42EP3-206ENST00000611976 ERVK-24P63145 666 aa11.77□□□□□ -0.53
CDC42EP3-206ENST00000611976 PPP2R5AQ15172 486 aa11.77□□□□□ -0.53
CDC42EP3-206ENST00000611976 ZNF34Q8IZ26 560 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms