RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 HIC1Q14526 733 aa8.12□□□□□ -1.11
CBWD1-219ENST00000611457 NPAS4Q8IUM7 802 aa8.12□□□□□ -1.11
CBWD1-219ENST00000611457 IGSF22Q8N9C0 903 aa8.12□□□□□ -1.11
CBWD1-219ENST00000611457 CWC22Q9HCG8 908 aaKnown RBP8.12□□□□□ -1.11
CBWD1-219ENST00000611457 TRPV2Q9Y5S1 764 aa8.12□□□□□ -1.11
CBWD1-219ENST00000611457 SEC24BO95487 1268 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 XBP1P17861 261 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 ATP4AP20648 1035 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 ZNF598Q86UK7 904 aaKnown RBP8.11□□□□□ -1.11
CBWD1-219ENST00000611457 SPATA18Q8TC71 538 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 HSD17B14Q9BPX1 270 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 SDF4Q9BRK5 362 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 SPDYE3A6NKU9 549 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 FAM86B1E9PN63 330 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 CCNE2O96020 404 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 FAM86B2P0C5J1 330 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 PLS1Q14651 629 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 NONOQ15233 471 aaKnown RBP eCLIP8.11□□□□□ -1.11
CBWD1-219ENST00000611457 SKOR2Q2VWA4 1001 aaPredicted RBP8.11□□□□□ -1.11
CBWD1-219ENST00000611457 MTHFD1LQ6UB35 978 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 C7orf61Q8IZ16 206 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 TBC1D5Q92609 795 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 PTPDC1A2A3K4 754 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 RAB27AP51159 221 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 MRPS6P82932 125 aaKnown RBP8.11□□□□□ -1.11
CBWD1-219ENST00000611457 FBXO47Q5MNV8 452 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 SRGAP1Q7Z6B7 1085 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 HVCN1Q96D96 273 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 AK8Q96MA6 479 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 ZKSCAN3Q9BRR0 538 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 TMEM175Q9BSA9 504 aa8.11□□□□□ -1.11
CBWD1-219ENST00000611457 ZHX1Q9UKY1 873 aaPredicted RBP8.11□□□□□ -1.11
CBWD1-219ENST00000611457 TMEM189-UBE2V1I3L0A0 370 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 GGPS1O95749 300 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 EOMESO95936 686 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 SARSP49591 514 aaKnown RBP8.1□□□□□ -1.11
CBWD1-219ENST00000611457 AK2P54819 239 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 ACTR2P61160 394 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 MBTPS1Q14703 1052 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 RRP12Q5JTH9 1297 aaKnown RBP8.1□□□□□ -1.11
CBWD1-219ENST00000611457 CNNM3Q8NE01 707 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 AFG1LQ8WV93 481 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 GUCD1Q96NT3 240 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.1□□□□□ -1.11
CBWD1-219ENST00000611457 CXXC1Q9P0U4 656 aaPredicted RBP8.1□□□□□ -1.11
CBWD1-219ENST00000611457 PCDHA10Q9Y5I2 948 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 IRAK3Q9Y616 596 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 GREB1Q4ZG55 1949 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 PLXND1Q9Y4D7 1925 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 H3BRB1 525 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 MSH4O15457 936 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 HOXA2O43364 376 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 NBNO60934 754 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 OFD1O75665 1012 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 GOLGA8HP0CJ92 632 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 POLGP54098 1239 aaPredicted RBP8.1□□□□□ -1.11
CBWD1-219ENST00000611457 PLCB3Q01970 1234 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 CCDC173Q0VFZ6 552 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 GNASQ5JWF2 1037 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 PRAMEF19Q5SWL8 479 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 ZSCAN30Q86W11 494 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 SLC17A8Q8NDX2 589 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 HAS1Q92839 578 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 TOP1MTQ969P6 601 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 CCDC113Q9H0I3 377 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 HIPK3Q9H422 1215 aa8.1□□□□□ -1.11
CBWD1-219ENST00000611457 TUT1Q9H6E5 874 aaKnown RBP8.1□□□□□ -1.11
CBWD1-219ENST00000611457 C19orf67A6NJJ6 358 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 WEE1P30291 646 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 ARL2P36404 184 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 NAPAP54920 295 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 WDR5P61964 334 aaKnown RBP8.09□□□□□ -1.11
CBWD1-219ENST00000611457 TMEM119Q4V9L6 283 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 XKR3Q5GH77 459 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 BRAPQ7Z569 592 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 NEK8Q86SG6 692 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 BRF1Q92994 677 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 PRIMPOLQ96LW4 560 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 NTPCRQ9BSD7 190 aaKnown RBP8.09□□□□□ -1.11
CBWD1-219ENST00000611457 TEKT3Q9BXF9 490 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 OXCT2Q9BYC2 517 aaPredicted RBP8.09□□□□□ -1.11
CBWD1-219ENST00000611457 UBN1Q9NPG3 1134 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 AVENQ9NQS1 362 aaPredicted RBP8.09□□□□□ -1.11
CBWD1-219ENST00000611457 RNF19AQ9NV58 838 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 MRVI1Q9Y6F6 885 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 HTTP42858 3142 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 COL4A3Q01955 1670 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 OATP04181 439 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 FAM163BP0C2L3 166 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 KRT2P35908 639 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 EPHB4P54760 987 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 APOBRQ0VD83 1088 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 ME3Q16798 604 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 NSMFQ6X4W1 530 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 CPXCR1Q8N123 301 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 FBXO18Q8NFZ0 1043 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 SPATA33Q96N06 139 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 FAM13BQ9NYF5 915 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 TBC1D7Q9P0N9 293 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 KIF3AQ9Y496 699 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms