RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 NOL4O94818 638 aa14.99□□□□□ -0.01
NEK3-205ENST00000610828 NMT1P30419 496 aaKnown RBP14.99□□□□□ -0.01
NEK3-205ENST00000610828 APBA1Q02410 837 aa14.99□□□□□ -0.01
NEK3-205ENST00000610828 BMT2Q1RMZ1 405 aa14.99□□□□□ -0.01
NEK3-205ENST00000610828 RABGGTAQ92696 567 aa14.99□□□□□ -0.01
NEK3-205ENST00000610828 RIT2Q99578 217 aa14.99□□□□□ -0.01
NEK3-205ENST00000610828 RPAP3Q9H6T3 665 aaPredicted RBP14.99□□□□□ -0.01
NEK3-205ENST00000610828 PARVGQ9HBI0 331 aa14.99□□□□□ -0.01
NEK3-205ENST00000610828 OGFRQ9NZT2 677 aa14.99□□□□□ -0.01
NEK3-205ENST00000610828 RPTORQ8N122 1335 aa14.99□□□□□ -0.01
NEK3-205ENST00000610828 CLIC2O15247 247 aa14.99□□□□□ -0.01
NEK3-205ENST00000610828 NR3C1P04150 777 aa14.99□□□□□ -0.01
NEK3-205ENST00000610828 MUTP22033 750 aa14.99□□□□□ -0.01
NEK3-205ENST00000610828 SPP2Q13103 211 aa14.99□□□□□ -0.01
NEK3-205ENST00000610828 TDRD12Q587J7 1177 aaKnown RBP14.99□□□□□ -0.01
NEK3-205ENST00000610828 B3GNT9Q6UX72 402 aa14.99□□□□□ -0.01
NEK3-205ENST00000610828 FRMD5Q7Z6J6 570 aa14.99□□□□□ -0.01
NEK3-205ENST00000610828 GINM1Q9NU53 330 aa14.99□□□□□ -0.01
NEK3-205ENST00000610828 PPP1R9AQ9ULJ8 1098 aa14.99□□□□□ -0.01
NEK3-205ENST00000610828 PCDHA13Q9Y5I0 950 aa14.99□□□□□ -0.01
NEK3-205ENST00000610828 AKAP3O75969 853 aa14.98□□□□□ -0.01
NEK3-205ENST00000610828 ZSCAN20P17040 1043 aaPredicted RBP14.98□□□□□ -0.01
NEK3-205ENST00000610828 RPL13P26373 211 aaKnown RBP14.98□□□□□ -0.01
NEK3-205ENST00000610828 AMPD2Q01433 879 aa14.98□□□□□ -0.01
NEK3-205ENST00000610828 WHAMMP3Q1A5X7 153 aa14.98□□□□□ -0.01
NEK3-205ENST00000610828 DCAF17Q5H9S7 520 aaPredicted RBP14.98□□□□□ -0.01
NEK3-205ENST00000610828 MIER3Q7Z3K6 550 aa14.98□□□□□ -0.01
NEK3-205ENST00000610828 TSGA10Q9BZW7 698 aa14.98□□□□□ -0.01
NEK3-205ENST00000610828 FRMPD4Q14CM0 1322 aa14.98□□□□□ -0.01
NEK3-205ENST00000610828 FZD9O00144 591 aa14.98□□□□□ -0.01
NEK3-205ENST00000610828 USO1O60763 962 aaKnown RBP14.98□□□□□ -0.01
NEK3-205ENST00000610828 ATP1A1P05023 1023 aaKnown RBP14.98□□□□□ -0.01
NEK3-205ENST00000610828 BCRP11274 1271 aa14.98□□□□□ -0.01
NEK3-205ENST00000610828 XRCC5P13010 732 aaKnown RBP14.98□□□□□ -0.01
NEK3-205ENST00000610828 USP14P54578 494 aa14.98□□□□□ -0.01
NEK3-205ENST00000610828 RPS6P62753 249 aaKnown RBP14.98□□□□□ -0.01
NEK3-205ENST00000610828 ZC2HC1CQ53FD0 456 aaPredicted RBP14.98□□□□□ -0.01
NEK3-205ENST00000610828 SFMBT2Q5VUG0 894 aa14.98□□□□□ -0.01
NEK3-205ENST00000610828 TCERG1LQ5VWI1 586 aa14.98□□□□□ -0.01
NEK3-205ENST00000610828 PRAMEF18Q5VWM3 479 aa14.98□□□□□ -0.01
NEK3-205ENST00000610828 TMCO3Q6UWJ1 677 aa14.98□□□□□ -0.01
NEK3-205ENST00000610828 ARHGAP27Q6ZUM4 889 aa14.98□□□□□ -0.01
NEK3-205ENST00000610828 SYTL5Q8TDW5 730 aaPredicted RBP14.98□□□□□ -0.01
NEK3-205ENST00000610828 SECISBP2LQ93073 1101 aaKnown RBP14.98□□□□□ -0.01
NEK3-205ENST00000610828 NUCKS1Q9H1E3 243 aaKnown RBP14.98□□□□□ -0.01
NEK3-205ENST00000610828 HDAC6Q9UBN7 1215 aa14.98□□□□□ -0.01
NEK3-205ENST00000610828 EIF3DO15371 548 aaKnown RBP eCLIP14.97□□□□□ -0.01
NEK3-205ENST00000610828 AFPP02771 609 aaKnown RBP14.97□□□□□ -0.01
NEK3-205ENST00000610828 EPB41P11171 864 aaKnown RBP14.97□□□□□ -0.01
NEK3-205ENST00000610828 EIF2AK2P19525 551 aaKnown RBP14.97□□□□□ -0.01
NEK3-205ENST00000610828 CASP4P49662 377 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 MRPS9P82933 396 aaKnown RBP14.97□□□□□ -0.01
NEK3-205ENST00000610828 TKFCQ3LXA3 575 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 PCNX4Q63HM2 1172 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 FAM178BQ8IXR5 827 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 ZKSCAN4Q969J2 545 aaPredicted RBP14.97□□□□□ -0.01
NEK3-205ENST00000610828 PARD6BQ9BYG5 372 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 IKZF4Q9H2S9 585 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 FZD1Q9UP38 647 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 SAMM50Q9Y512 469 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 CTAGE15A4D2H0 777 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 ARHGEF35A5YM69 484 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 TGFB1I1O43294 461 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 ZBED4O75132 1171 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 CTAGE8P0CG41 777 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 GFPT1Q06210 699 aaPredicted RBP14.97□□□□□ -0.01
NEK3-205ENST00000610828 MTMR1Q13613 665 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 SLC9C1Q4G0N8 1177 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 ODR4Q5SWX8 454 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 DCAF15Q66K64 600 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 HGSNATQ68CP4 663 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 TRAPPC11Q7Z392 1133 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 CTAGE6Q86UF2 777 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 KSR1Q8IVT5 923 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 CTAGE4Q8IX94 777 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 TRERF1Q96PN7 1200 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 TAAR1Q96RJ0 339 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 WRNIP1Q96S55 665 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 KCND2Q9NZV8 630 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 PCDHB13Q9Y5F0 798 aa14.97□□□□□ -0.01
NEK3-205ENST00000610828 LCA5LO95447 670 aa14.96□□□□□ -0.01
NEK3-205ENST00000610828 MYCLP12524 364 aaPredicted RBP14.96□□□□□ -0.01
NEK3-205ENST00000610828 GHRHRQ02643 423 aa14.96□□□□□ -0.01
NEK3-205ENST00000610828 ARID5AQ03989 594 aa14.96□□□□□ -0.01
NEK3-205ENST00000610828 ITGB3BPQ13352 177 aaPredicted RBP14.96□□□□□ -0.01
NEK3-205ENST00000610828 RAPGEF1Q13905 1077 aa14.96□□□□□ -0.01
NEK3-205ENST00000610828 R3HDM1Q15032 1099 aaKnown RBP14.96□□□□□ -0.01
NEK3-205ENST00000610828 NSMFQ6X4W1 530 aa14.96□□□□□ -0.01
NEK3-205ENST00000610828 NEK9Q8TD19 979 aa14.96□□□□□ -0.01
NEK3-205ENST00000610828 PURBQ96QR8 312 aaKnown RBP14.96□□□□□ -0.01
NEK3-205ENST00000610828 SEL1LQ9UBV2 794 aa14.96□□□□□ -0.01
NEK3-205ENST00000610828 ODF2LQ9ULJ1 636 aa14.96□□□□□ -0.01
NEK3-205ENST00000610828 SAR1BQ9Y6B6 198 aa14.96□□□□□ -0.01
NEK3-205ENST00000610828 LTBP3Q9NS15 1303 aa14.96□□□□□ -0.01
NEK3-205ENST00000610828 ZMYM2Q9UBW7 1377 aa14.96□□□□□ -0.01
NEK3-205ENST00000610828 SSU72P8A0A1W2PR75 194 aa14.96□□□□□ -0.02
NEK3-205ENST00000610828 SLC16A3O15427 465 aaKnown RBP14.96□□□□□ -0.02
NEK3-205ENST00000610828 DHX15O43143 795 aaKnown RBP14.96□□□□□ -0.02
NEK3-205ENST00000610828 TLR2O60603 784 aa14.96□□□□□ -0.02
NEK3-205ENST00000610828 MAGEA1P43355 309 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms