RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 LMNB1P20700 586 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 CAP2P40123 477 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 SNX16P57768 344 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 IRX5P78411 483 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-218ENST00000610726 IFRD2Q12894 506 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-218ENST00000610726 ALKBH5Q6P6C2 394 aaKnown RBP7.91□□□□□ -1.14
CSDE1-218ENST00000610726 TOGARAM2Q6ZUX3 1019 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 GPR161Q8N6U8 529 aaKnown RBP7.91□□□□□ -1.14
CSDE1-218ENST00000610726 ZNF653Q96CK0 615 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 FAM204AQ9H8W3 233 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 ATP6V0A4Q9HBG4 840 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 NUB1Q9Y5A7 615 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 FAM205AQ6ZU69 1335 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 E7EVH7 732 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 THAP12O43422 761 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 ZMYND10O75800 440 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 TRIM49P0CI25 452 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 TRIM49CP0CI26 452 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 EVX2Q03828 476 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 DPYDQ12882 1025 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 NEDD9Q14511 834 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 PKN1Q16512 942 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 ZNF394Q53GI3 561 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 SCARA5Q6ZMJ2 495 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 DPH5Q9H2P9 285 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 ZNF302Q9NR11 478 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 RSPH14Q9UHP6 348 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 TUBE1Q9UJT0 475 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 EFCAB8A8MWE9 144 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 RGL2O15211 777 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 CLDN3O15551 220 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 SLC37A4O43826 429 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 TAL1P17542 331 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-218ENST00000610726 RPS12P25398 132 aaKnown RBP7.91□□□□□ -1.14
CSDE1-218ENST00000610726 SFNP31947 248 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 BPIFB4P59827 614 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 PAK2Q13177 524 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 NBPF12Q5TAG4 269 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-218ENST00000610726 APOBEC3HQ6NTF7 200 aaKnown RBP7.91□□□□□ -1.14
CSDE1-218ENST00000610726 C7orf31Q8N865 590 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 RBM46Q8TBY0 533 aaKnown RBP7.91□□□□□ -1.14
CSDE1-218ENST00000610726 SAAL1Q96ER3 474 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 ANKRD36BP1Q96IX9 119 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 FAM213AQ9BRX8 229 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 RABEP2Q9H5N1 569 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 FAM217BQ9NTX9 383 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-218ENST00000610726 ABHD10Q9NUJ1 306 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 OGFRQ9NZT2 677 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 RIC1Q4ADV7 1423 aa7.91□□□□□ -1.14
CSDE1-218ENST00000610726 LRRC53A6NM62 1247 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 GOLGA8SH3BPF8 625 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 CTNND1O60716 968 aaKnown RBP7.9□□□□□ -1.14
CSDE1-218ENST00000610726 HIP1RO75146 1068 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 EYA4O95677 639 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 SMARCA1P28370 1054 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 SHMT1P34896 483 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 RPS6P62753 249 aaKnown RBP7.9□□□□□ -1.14
CSDE1-218ENST00000610726 KCNB1Q14721 858 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 DACT2Q5SW24 774 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 INTS8Q75QN2 995 aaKnown RBP7.9□□□□□ -1.14
CSDE1-218ENST00000610726 CCDC170Q8IYT3 715 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 PROM2Q8N271 834 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 TAB3Q8N5C8 712 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-218ENST00000610726 RPGRIP1Q96KN7 1286 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 RPS6KC1Q96S38 1066 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 MED10Q9BTT4 135 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 TYW1Q9NV66 732 aaKnown RBP7.9□□□□□ -1.14
CSDE1-218ENST00000610726 DNAJC12Q9UKB3 198 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 TTLL3Q9Y4R7 772 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 FMN2Q9NZ56 1722 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 SYNJ2BP-COX16A0A087WUM0 186 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 GOLGA6BA6NDN3 693 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 C19orf81C9J6K1 198 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 SERPING1P05155 500 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 ALCAMQ13740 583 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 MAPK6Q16659 721 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 NAALADL2Q58DX5 795 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 EARS2Q5JPH6 523 aaKnown RBP7.9□□□□□ -1.14
CSDE1-218ENST00000610726 SPOUT1Q5T280 376 aaKnown RBP7.9□□□□□ -1.14
CSDE1-218ENST00000610726 KAZNQ674X7 775 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 PPP1R21Q6ZMI0 780 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 ADSSL1Q8N142 457 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 CCDC63Q8NA47 563 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 FAM76AQ8TAV0 307 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 NEK9Q8TD19 979 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 AKT1S1Q96B36 256 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 MMP19Q99542 508 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 NBPF3Q9H094 633 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 COX16Q9P0S2 106 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 TXNDC16Q9P2K2 825 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 SLC9A2Q9UBY0 812 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 PCDHA13Q9Y5I0 950 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 KIF13AQ9H1H9 1805 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 SALL1Q9NSC2 1324 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 MON2Q7Z3U7 1717 aa7.9□□□□□ -1.14
CSDE1-218ENST00000610726 ESYT2A0FGR8 921 aa7.9□□□□□ -1.15
CSDE1-218ENST00000610726 USP27XA6NNY8 438 aa7.9□□□□□ -1.15
CSDE1-218ENST00000610726 TLR3O15455 904 aaKnown RBP7.9□□□□□ -1.15
CSDE1-218ENST00000610726 GAS8O95995 478 aa7.9□□□□□ -1.15
CSDE1-218ENST00000610726 TM4SF1P30408 202 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms