RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 PTK2Q05397 1052 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 TRIP13Q15645 432 aaPredicted RBP7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 CENPPQ6IPU0 288 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 ZNF365Q70YC5 407 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 ZNF713Q8N859 430 aaPredicted RBP7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 FBXL5Q9UKA1 691 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 KDM4FA0A1W2PPD8 638 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 SSU72P8A0A1W2PR75 194 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 GH2P01242 217 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 GLI1P08151 1106 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 POLR2MP0CAP2 368 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 LMNB1P20700 586 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 NMT1P30419 496 aaKnown RBP7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 ZNF543Q08ER8 600 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 PDIA5Q14554 519 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 NAA25Q14CX7 972 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 ZKSCAN8Q15776 578 aaPredicted RBP7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 ICE2Q659A1 982 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 OTUD6AQ7L8S5 288 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 DPH6Q7L8W6 267 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 APTXQ7Z2E3 356 aaKnown RBP7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 MIER3Q7Z3K6 550 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 KCNK18Q7Z418 384 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 MMGT1Q8N4V1 131 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 TBC1D31Q96DN5 1066 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 TAF1DQ9H5J8 278 aaPredicted RBP7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 INTS9Q9NV88 658 aaKnown RBP7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 TMEM51Q9NW97 253 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 LARSQ9P2J5 1176 aaKnown RBP7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 CHORDC1Q9UHD1 332 aaPredicted RBP7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 STK38LQ9Y2H1 464 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 NOC2LQ9Y3T9 749 aaKnown RBP7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 BCL9O00512 1426 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 EIF3HO15372 352 aaKnown RBP eCLIP7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 SLURP2P0DP57 97 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 BMP3P12645 472 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 UCHL3P15374 230 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 COPB2P35606 906 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 MAP2K2P36507 400 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 FAM102BQ5T8I3 360 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 SLC30A10Q6XR72 485 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 C16orf86Q6ZW13 317 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 TAB3Q8N5C8 712 aaPredicted RBP7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 ZNF507Q8TCN5 953 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 TCP11Q8WWU5 503 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 TNFRSF25Q93038 417 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 CSRNP1Q96S65 589 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 TACO1Q9BSH4 297 aaKnown RBP7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 CELF4Q9BZC1 486 aaKnown RBP7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 JMJD4Q9H9V9 463 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 PARVGQ9HBI0 331 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 NKIRAS1Q9NYS0 192 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 TMOD4Q9NZQ9 345 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 HMGB1P1B2RPK0 211 aaPredicted RBP7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 TTI1O43156 1089 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 FOSP01100 380 aaPredicted RBP7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 MYBP10242 640 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 ALAS1P13196 640 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 TMOD1P28289 359 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 DR1Q01658 176 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 DRAP1Q14919 205 aaPredicted RBP7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 WDR78Q5VTH9 848 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 USP37Q86T82 979 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 SHISA4Q96DD7 197 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 RNPC3Q96LT9 517 aaKnown RBP7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 FNBP1Q96RU3 617 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 ZNF577Q9BSK1 485 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 MLXIPLQ9NP71 852 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 CAMTA1Q9Y6Y1 1673 aa7.46□□□□□ -1.22
SYNPO2-206ENST00000610556 A0A1W2PQJ5 194 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 F5H6K3 240 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 AMPD2Q01433 879 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 KLRC3Q07444 240 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 NPY5RQ15761 445 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 SYDE2Q5VT97 1194 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 CREG2Q8IUH2 290 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 ATP6V1G3Q96LB4 118 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 REEP2Q9BRK0 252 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 TRIM51Q9BSJ1 452 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 FAM114A2Q9NRY5 505 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 PHRF1Q9P1Y6 1649 aaKnown RBP7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 PPP1R37O75864 691 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 IFNB1P01574 187 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 FAM153BP0C7A2 387 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 TAL1P17542 331 aaPredicted RBP7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 GCLMP48507 274 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 SMTNP53814 917 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 UAP1Q16222 522 aaPredicted RBP7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 FAM153CQ494X1 144 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 ZC2HC1CQ53FD0 456 aaPredicted RBP7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 FAM133BQ5BKY9 247 aaKnown RBP7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 MMS22LQ6ZRQ5 1243 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 ANKS1AQ92625 1134 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 PNMA5Q96PV4 448 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 TLR10Q9BXR5 811 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 BLOC1S4Q9NUP1 217 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 TBK1Q9UHD2 729 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 FAM153AQ9UHL3 310 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 SPATA31A1Q5TZJ5 1347 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms