RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 CTSHP09668 335 aa17.08■□□□□ 0.32
LMBR1-220ENST00000609081 JAK3P52333 1124 aa17.08■□□□□ 0.32
LMBR1-220ENST00000609081 ME3Q16798 604 aa17.08■□□□□ 0.32
LMBR1-220ENST00000609081 SWSAP1Q6NVH7 229 aa17.08■□□□□ 0.32
LMBR1-220ENST00000609081 CCDC60Q8IWA6 550 aaPredicted RBP17.08■□□□□ 0.32
LMBR1-220ENST00000609081 MAFAQ8NHW3 353 aaPredicted RBP17.08■□□□□ 0.32
LMBR1-220ENST00000609081 BBXQ8WY36 941 aaPredicted RBP17.08■□□□□ 0.32
LMBR1-220ENST00000609081 SLC5A5Q92911 643 aa17.08■□□□□ 0.32
LMBR1-220ENST00000609081 MBOAT7Q96N66 472 aa17.08■□□□□ 0.32
LMBR1-220ENST00000609081 AIFM3Q96NN9 605 aa17.08■□□□□ 0.32
LMBR1-220ENST00000609081 TEKT3Q9BXF9 490 aa17.08■□□□□ 0.32
LMBR1-220ENST00000609081 SAMM50Q9Y512 469 aa17.08■□□□□ 0.32
LMBR1-220ENST00000609081 SMIM35A0A1B0GVV1 85 aa17.07■□□□□ 0.32
LMBR1-220ENST00000609081 CTDNEP1O95476 244 aa17.07■□□□□ 0.32
LMBR1-220ENST00000609081 CHRNA1P02708 482 aa17.07■□□□□ 0.32
LMBR1-220ENST00000609081 CA3P07451 260 aa17.07■□□□□ 0.32
LMBR1-220ENST00000609081 IGBP1P78318 339 aa17.07■□□□□ 0.32
LMBR1-220ENST00000609081 MRPS6P82932 125 aaKnown RBP17.07■□□□□ 0.32
LMBR1-220ENST00000609081 MGAT3Q09327 533 aa17.07■□□□□ 0.32
LMBR1-220ENST00000609081 MKRN4PQ13434 485 aaPredicted RBP17.07■□□□□ 0.32
LMBR1-220ENST00000609081 LRCH2Q5VUJ6 765 aa17.07■□□□□ 0.32
LMBR1-220ENST00000609081 RUFY4Q6ZNE9 571 aa17.07■□□□□ 0.32
LMBR1-220ENST00000609081 ZNF710Q8N1W2 664 aa17.07■□□□□ 0.32
LMBR1-220ENST00000609081 SLC17A8Q8NDX2 589 aa17.07■□□□□ 0.32
LMBR1-220ENST00000609081 DNAJB3Q8WWF6 145 aa17.07■□□□□ 0.32
LMBR1-220ENST00000609081 RAD9AQ99638 391 aa17.07■□□□□ 0.32
LMBR1-220ENST00000609081 IFIH1Q9BYX4 1025 aaKnown RBP17.07■□□□□ 0.32
LMBR1-220ENST00000609081 LIMCH1Q9UPQ0 1083 aa17.07■□□□□ 0.32
LMBR1-220ENST00000609081 IGSF9BQ9UPX0 1349 aa17.06■□□□□ 0.32
LMBR1-220ENST00000609081 KDM3AQ9Y4C1 1321 aa17.06■□□□□ 0.32
LMBR1-220ENST00000609081 EDIL3O43854 480 aa17.06■□□□□ 0.32
LMBR1-220ENST00000609081 C8orf34Q49A92 452 aa17.06■□□□□ 0.32
LMBR1-220ENST00000609081 PPP4R3AQ6IN85 833 aa17.06■□□□□ 0.32
LMBR1-220ENST00000609081 MTHFD1LQ6UB35 978 aa17.06■□□□□ 0.32
LMBR1-220ENST00000609081 NEK8Q86SG6 692 aa17.06■□□□□ 0.32
LMBR1-220ENST00000609081 CKAP2LQ8IYA6 745 aa17.06■□□□□ 0.32
LMBR1-220ENST00000609081 PRDM12Q9H4Q4 367 aa17.06■□□□□ 0.32
LMBR1-220ENST00000609081 DISC1Q9NRI5 854 aa17.06■□□□□ 0.32
LMBR1-220ENST00000609081 KCNJ14Q9UNX9 436 aa17.06■□□□□ 0.32
LMBR1-220ENST00000609081 PSMD10O75832 226 aa17.05■□□□□ 0.32
LMBR1-220ENST00000609081 MYOGP15173 224 aa17.05■□□□□ 0.32
LMBR1-220ENST00000609081 DEFB103AP81534 67 aa17.05■□□□□ 0.32
LMBR1-220ENST00000609081 TRIM29Q14134 588 aa17.05■□□□□ 0.32
LMBR1-220ENST00000609081 INF2Q27J81 1249 aa17.05■□□□□ 0.32
LMBR1-220ENST00000609081 FBXO47Q5MNV8 452 aa17.05■□□□□ 0.32
LMBR1-220ENST00000609081 TSHZ1Q6ZSZ6 1077 aa17.05■□□□□ 0.32
LMBR1-220ENST00000609081 NECAB1Q8N987 351 aa17.05■□□□□ 0.32
LMBR1-220ENST00000609081 NSUN7Q8NE18 718 aaKnown RBP17.05■□□□□ 0.32
LMBR1-220ENST00000609081 ZSCAN31Q96LW9 406 aaPredicted RBP17.05■□□□□ 0.32
LMBR1-220ENST00000609081 FAM20AQ96MK3 541 aa17.05■□□□□ 0.32
LMBR1-220ENST00000609081 GABBR1Q9UBS5 961 aa17.05■□□□□ 0.32
LMBR1-220ENST00000609081 DDX25Q9UHL0 483 aaKnown RBP17.05■□□□□ 0.32
LMBR1-220ENST00000609081 INSL6Q9Y581 213 aa17.05■□□□□ 0.32
LMBR1-220ENST00000609081 TRPV2Q9Y5S1 764 aa17.05■□□□□ 0.32
LMBR1-220ENST00000609081 CDY2AQ9Y6F7 541 aa17.05■□□□□ 0.32
LMBR1-220ENST00000609081 SIP14410 1827 aa17.05■□□□□ 0.32
LMBR1-220ENST00000609081 EVPLQ92817 2033 aa17.04■□□□□ 0.32
LMBR1-220ENST00000609081 CHD9Q3L8U1 2897 aa17.04■□□□□ 0.32
LMBR1-220ENST00000609081 TBX3O15119 743 aa17.04■□□□□ 0.32
LMBR1-220ENST00000609081 MAGEB2O15479 319 aa17.04■□□□□ 0.32
LMBR1-220ENST00000609081 LARGE1O95461 756 aa17.04■□□□□ 0.32
LMBR1-220ENST00000609081 TDP2O95551 362 aa17.04■□□□□ 0.32
LMBR1-220ENST00000609081 FDPSP14324 419 aaKnown RBP17.04■□□□□ 0.32
LMBR1-220ENST00000609081 KLRC1P26715 233 aa17.04■□□□□ 0.32
LMBR1-220ENST00000609081 KRT2P35908 639 aa17.04■□□□□ 0.32
LMBR1-220ENST00000609081 TAP1Q03518 808 aa17.04■□□□□ 0.32
LMBR1-220ENST00000609081 TCTN1Q2MV58 587 aa17.04■□□□□ 0.32
LMBR1-220ENST00000609081 ODR4Q5SWX8 454 aa17.04■□□□□ 0.32
LMBR1-220ENST00000609081 ETNPPLQ8TBG4 499 aa17.04■□□□□ 0.32
LMBR1-220ENST00000609081 LLPHQ9BRT6 129 aaKnown RBP17.04■□□□□ 0.32
LMBR1-220ENST00000609081 FTHL17Q9BXU8 183 aa17.04■□□□□ 0.32
LMBR1-220ENST00000609081 FAM49AQ9H0Q0 323 aaPredicted RBP17.04■□□□□ 0.32
LMBR1-220ENST00000609081 UPF2Q9HAU5 1272 aaKnown RBP17.04■□□□□ 0.32
LMBR1-220ENST00000609081 NRBP2Q9NSY0 501 aa17.04■□□□□ 0.32
LMBR1-220ENST00000609081 GHRP10912 638 aa17.03■□□□□ 0.32
LMBR1-220ENST00000609081 POU3F3P20264 500 aaPredicted RBP17.03■□□□□ 0.32
LMBR1-220ENST00000609081 ATP4AP20648 1035 aa17.03■□□□□ 0.32
LMBR1-220ENST00000609081 RBM25P49756 843 aaKnown RBP17.03■□□□□ 0.32
LMBR1-220ENST00000609081 LPIN1Q14693 890 aa17.03■□□□□ 0.32
LMBR1-220ENST00000609081 LETM2Q2VYF4 491 aa17.03■□□□□ 0.32
LMBR1-220ENST00000609081 MIER3Q7Z3K6 550 aa17.03■□□□□ 0.32
LMBR1-220ENST00000609081 MYOCDQ8IZQ8 938 aa17.03■□□□□ 0.32
LMBR1-220ENST00000609081 TRAPPC12Q8WVT3 735 aa17.03■□□□□ 0.32
LMBR1-220ENST00000609081 TOP1MTQ969P6 601 aa17.03■□□□□ 0.32
LMBR1-220ENST00000609081 CELF4Q9BZC1 486 aaKnown RBP17.03■□□□□ 0.32
LMBR1-220ENST00000609081 UNC45AQ9H3U1 944 aa17.03■□□□□ 0.32
LMBR1-220ENST00000609081 SH2B1Q9NRF2 756 aaPredicted RBP17.03■□□□□ 0.32
LMBR1-220ENST00000609081 COL4A6Q14031 1691 aa17.03■□□□□ 0.32
LMBR1-220ENST00000609081 LOXHD1Q8IVV2 1947 aa17.02■□□□□ 0.32
LMBR1-220ENST00000609081 ZBTB42B2RXF5 422 aa17.02■□□□□ 0.32
LMBR1-220ENST00000609081 DKC1O60832 514 aaKnown RBP eCLIP17.02■□□□□ 0.32
LMBR1-220ENST00000609081 MMP1P03956 469 aa17.02■□□□□ 0.32
LMBR1-220ENST00000609081 OATP04181 439 aa17.02■□□□□ 0.32
LMBR1-220ENST00000609081 TMOD1P28289 359 aa17.02■□□□□ 0.32
LMBR1-220ENST00000609081 HTRA4P83105 476 aaPredicted RBP17.02■□□□□ 0.32
LMBR1-220ENST00000609081 B3GNT9Q6UX72 402 aa17.02■□□□□ 0.32
LMBR1-220ENST00000609081 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.02■□□□□ 0.32
LMBR1-220ENST00000609081 PIK3AP1Q6ZUJ8 805 aa17.02■□□□□ 0.32
LMBR1-220ENST00000609081 SAMD11Q96NU1 681 aa17.02■□□□□ 0.32
LMBR1-220ENST00000609081 UIMC1Q96RL1 719 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms