RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 NEMFO60524 1076 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 RPN1P04843 607 aaKnown RBP7.66□□□□□ -1.18
CDC40-207ENST00000606893 GYPCP04921 128 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 OSBPP22059 807 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 PSMC4P43686 418 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 TRAPPC10P48553 1259 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 GTF2A2P52657 109 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 STK4Q13043 487 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 PABPC4Q13310 644 aaKnown RBP eCLIP7.66□□□□□ -1.18
CDC40-207ENST00000606893 LONRF2Q1L5Z9 754 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 DCAF17Q5H9S7 520 aaPredicted RBP7.66□□□□□ -1.18
CDC40-207ENST00000606893 SARM1Q6SZW1 724 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 KLHL7Q8IXQ5 586 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 IL31RAQ8NI17 732 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 TBCKQ8TEA7 893 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 SPIRE2Q8WWL2 714 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 CCDC47Q96A33 483 aaKnown RBP7.66□□□□□ -1.18
CDC40-207ENST00000606893 GMCL1Q96IK5 515 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 MS4A14Q96JA4 679 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 NOC4LQ9BVI4 516 aaKnown RBP7.66□□□□□ -1.18
CDC40-207ENST00000606893 MOV10L1Q9BXT6 1211 aaKnown RBP7.66□□□□□ -1.18
CDC40-207ENST00000606893 RBPJLQ9UBG7 517 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 TIAM2Q8IVF5 1701 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 PITPNM2Q9BZ72 1349 aa7.66□□□□□ -1.18
CDC40-207ENST00000606893 ZSCAN5CA6NGD5 496 aaPredicted RBP7.65□□□□□ -1.18
CDC40-207ENST00000606893 H3BQF6 201 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 WDR46O15213 610 aaKnown RBP7.65□□□□□ -1.18
CDC40-207ENST00000606893 MOCS3O95396 460 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 FTCDO95954 541 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 ATP1A1P05023 1023 aaKnown RBP7.65□□□□□ -1.18
CDC40-207ENST00000606893 COPB1P53618 953 aaKnown RBP7.65□□□□□ -1.18
CDC40-207ENST00000606893 ERVK-24P63145 666 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 KCTD2Q14681 263 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 CCDC40Q4G0X9 1142 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 LDLRAD1Q5T700 205 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 ARHGEF16Q5VV41 709 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 RNF207Q6ZRF8 634 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 NEK8Q86SG6 692 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 GMCL1P1Q8NEA9 526 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 BORCS6Q96GS4 357 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 MS4A4AQ96JQ5 239 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 RMDN3Q96TC7 470 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 MTRQ99707 1265 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 NUDT12Q9BQG2 462 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 LACRTQ9GZZ8 138 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 EXOC1Q9NV70 894 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 HOXC10Q9NYD6 342 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 PPP1R9AQ9ULJ8 1098 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 TELO2Q9Y4R8 837 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 DLEC1Q9Y238 1755 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 PRUNE2Q8WUY3 3088 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 CTAGE15A4D2H0 777 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 GCOM1H8Y6P7 765 aaPredicted RBP7.65□□□□□ -1.18
CDC40-207ENST00000606893 POLR2MP0CAP2 368 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 CTAGE8P0CG41 777 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 MARK3P27448 753 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 RAPGEF1Q13905 1077 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 CCDC181Q5TID7 509 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 MCTP2Q6DN12 878 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 POTEEQ6S8J3 1075 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 CATSPERGQ6ZRH7 1159 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 CTAGE6Q86UF2 777 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 CTAGE4Q8IX94 777 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 SH3TC2Q8TF17 1288 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 PHF20Q9BVI0 1012 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 RIOX1Q9H6W3 641 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 MED4Q9NPJ6 270 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 LRWD1Q9UFC0 647 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 TRIM17Q9Y577 477 aa7.65□□□□□ -1.18
CDC40-207ENST00000606893 IGKV6D-41A0A0C4DH26 115 aa7.65□□□□□ -1.19
CDC40-207ENST00000606893 TMEM110-MUSTN1A8MSY1 372 aa7.65□□□□□ -1.19
CDC40-207ENST00000606893 POTEB2H3BUK9 544 aa7.65□□□□□ -1.19
CDC40-207ENST00000606893 FOSP01100 380 aaPredicted RBP7.65□□□□□ -1.19
CDC40-207ENST00000606893 ADCY1Q08828 1119 aa7.65□□□□□ -1.19
CDC40-207ENST00000606893 TRIM32Q13049 653 aa7.65□□□□□ -1.19
CDC40-207ENST00000606893 FASTKD5Q7L8L6 764 aaKnown RBP7.65□□□□□ -1.19
CDC40-207ENST00000606893 FBXO16Q8IX29 292 aaPredicted RBP7.65□□□□□ -1.19
CDC40-207ENST00000606893 COPS5Q92905 334 aa7.65□□□□□ -1.19
CDC40-207ENST00000606893 NAP1L4Q99733 375 aaKnown RBP7.65□□□□□ -1.19
CDC40-207ENST00000606893 SPATC1LQ9H0A9 340 aa7.65□□□□□ -1.19
CDC40-207ENST00000606893 COL20A1Q9P218 1284 aa7.65□□□□□ -1.19
CDC40-207ENST00000606893 CASP8AP2Q9UKL3 1982 aa7.64□□□□□ -1.19
CDC40-207ENST00000606893 CLIC2O15247 247 aa7.64□□□□□ -1.19
CDC40-207ENST00000606893 HPDP32754 393 aaPredicted RBP7.64□□□□□ -1.19
CDC40-207ENST00000606893 PPIL2Q13356 520 aa7.64□□□□□ -1.19
CDC40-207ENST00000606893 HLTFQ14527 1009 aaKnown RBP eCLIP7.64□□□□□ -1.19
CDC40-207ENST00000606893 MCF2L2Q86YR7 1114 aa7.64□□□□□ -1.19
CDC40-207ENST00000606893 IFNL1Q8IU54 200 aa7.64□□□□□ -1.19
CDC40-207ENST00000606893 HDAC7Q8WUI4 952 aa7.64□□□□□ -1.19
CDC40-207ENST00000606893 GOLGA1Q92805 767 aa7.64□□□□□ -1.19
CDC40-207ENST00000606893 FERMT2Q96AC1 680 aa7.64□□□□□ -1.19
CDC40-207ENST00000606893 ZBTB10Q96DT7 871 aa7.64□□□□□ -1.19
CDC40-207ENST00000606893 CCDC43Q96MW1 224 aaKnown RBP7.64□□□□□ -1.19
CDC40-207ENST00000606893 MMS19Q96T76 1030 aa7.64□□□□□ -1.19
CDC40-207ENST00000606893 PDGFCQ9NRA1 345 aa7.64□□□□□ -1.19
CDC40-207ENST00000606893 CWC15Q9P013 229 aaKnown RBP7.64□□□□□ -1.19
CDC40-207ENST00000606893 SYNPO2Q9UMS6 1093 aa7.64□□□□□ -1.19
CDC40-207ENST00000606893 AGTPBP1Q9UPW5 1226 aa7.64□□□□□ -1.19
CDC40-207ENST00000606893 SRPRBQ9Y5M8 271 aaKnown RBP7.64□□□□□ -1.19
CDC40-207ENST00000606893 ADGRG1Q9Y653 693 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms