RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SMG5Q9UPR3 1016 aaKnown RBP4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 MAP2P11137 1827 aaKnown RBP4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 ITSN1Q15811 1721 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 FRMPD1Q5SYB0 1578 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 LRRC7Q96NW7 1537 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 KDM6AO15550 1401 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 NPHP4O75161 1426 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 MAP3K5Q99683 1374 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 FAM237AA0A1B0GTK4 181 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 SHTN1A0MZ66 631 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 VPS37CA5D8V6 355 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 GOLGA8KD6RF30 607 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 HIP1O00291 1037 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 LIN7AO14910 233 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 EIF3HO15372 352 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 KINO60870 393 aaKnown RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 LARGE1O95461 756 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 CST3P01034 146 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 PGRP06401 933 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 HMGB1P09429 215 aaKnown RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 USP17L7P0C7H9 530 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 MYBL2P10244 700 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 PECAM1P16284 738 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 ZKSCAN1P17029 563 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 SCP2P22307 547 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 TPP2P29144 1249 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 SLC8A1P32418 973 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 TNK2Q07912 1038 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 ACTN3Q08043 901 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 BIRC2Q13490 618 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 PDIA5Q14554 519 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 PDCD2Q16342 344 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 FILIP1LQ4L180 1135 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 PLEKHO1Q53GL0 409 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 ALS2CLQ60I27 953 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 AP1ARQ63HQ0 302 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 CDCA2Q69YH5 1023 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 TTBK2Q6IQ55 1244 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 C6orf89Q6UWU4 347 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 CRELD2Q6UXH1 353 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCDC73Q6ZRK6 1079 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 ZNF662Q6ZS27 426 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 FAM43BQ6ZT52 329 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 SDCCAG8Q86SQ7 713 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 IQCA1Q86XH1 822 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 CNTROBQ8N137 903 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 AOPEPQ8N6M6 819 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 RETREG2Q8NC44 543 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 SMARCC2Q8TAQ2 1214 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 RIN3Q8TB24 985 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 PIWIL2Q8TC59 973 aaKnown RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 COG1Q8WTW3 980 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 RILPL2Q969X0 211 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 ANKRD27Q96NW4 1050 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 PANX2Q96RD6 677 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 WDR24Q96S15 920 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 MEIS3Q99687 375 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 DPH2Q9BQC3 489 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 JPH2Q9BR39 696 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 MOV10L1Q9BXT6 1211 aaKnown RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 SLC6A17Q9H1V8 727 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 HSD3B7Q9H2F3 369 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 KCNK12Q9HB15 430 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 SPATS2LQ9NUQ6 558 aaKnown RBP4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 GPATCH2Q9NW75 528 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 RTEL1Q9NZ71 1219 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 HMG20BQ9P0W2 317 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 DUSP13Q9UII6 198 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 TUBE1Q9UJT0 475 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 TPCN1Q9ULQ1 816 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 PPLO60437 1756 aa4.57□□□□□ -1.68
HMGB1P50-201ENST00000605814 CD163L1Q9NR16 1453 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 CTAGE15A4D2H0 777 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 LRRIQ3A6PVS8 624 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 RFXAPO00287 272 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 OPA1O60313 960 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 PFKFB2O60825 505 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 N4BP1O75113 896 aaKnown RBP4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 NEBLO76041 1014 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 SNUPNO95149 360 aaKnown RBP4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 CTAGE8P0CG41 777 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 MED14OSP0DP75 135 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 EZRP15311 586 aaKnown RBP4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 PRKAR2BP31323 418 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 IL13P35225 146 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 PDE6BP35913 854 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 CAP2P40123 477 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 BUD31P41223 144 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 LIG3P49916 1009 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 USP14P54578 494 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 UBASH3AP57075 661 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 ERVFC1P60507 584 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 APBA1Q02410 837 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 ITIH3Q06033 890 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 PDE4BQ07343 736 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 RIPK1Q13546 671 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 GNL2Q13823 731 aaKnown RBP4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 KRT32Q14532 448 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 DSC3Q14574 896 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 RBBP5Q15291 538 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms