RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 SHANK3Q9BYB0 1731 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 ST7Q9NRC1 585 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 MYO6Q9UM54 1294 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 ADAMTS8Q9UP79 889 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 AGTPBP1Q9UPW5 1226 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 RGS12O14924 1447 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 CTIFO43310 598 aaKnown RBP6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 EXTL3O43909 919 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 SIN3BO75182 1162 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 ATP6V1B1P15313 513 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 XPAP23025 273 aaPredicted RBP6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 GPTP24298 496 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 GCLCP48506 637 aaPredicted RBP6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 BLVRAP53004 296 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 RUNX1T1Q06455 604 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 ANGPTL8Q6UXH0 198 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 CEP128Q6ZU80 1094 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 ENOSF1Q7L5Y1 443 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 CEP57Q86XR8 500 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 HID1Q8IV36 788 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 NRSN1Q8IZ57 195 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 OSBP2Q969R2 916 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 SDCCAG3Q96C92 435 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 ZNF277Q9NRM2 450 aaPredicted RBP6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 MTRRQ9UBK8 725 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 HPCAL4Q9UM19 191 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 EXOC7Q9UPT5 735 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 EFR3BQ9Y2G0 817 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 MRPL11Q9Y3B7 192 aaKnown RBP6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 ATP5BP06576 529 aaKnown RBP6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 PSMA4P25789 261 aaKnown RBP6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 IL1RL1Q01638 556 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 IFIT5Q13325 482 aaKnown RBP6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 MTMR3Q13615 1198 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 CEP78Q5JTW2 689 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 XKR5Q6UX68 686 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 PPP1R21Q6ZMI0 780 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 MAMDC2Q7Z304 686 aaPredicted RBP6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 ANKRD35Q8N283 1001 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 ASB16Q96NS5 453 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 ALS2CR12Q96Q35 445 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 WDR24Q96S15 920 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 ASPSCR1Q9BZE9 553 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 CCSER1Q9C0I3 900 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 SIL1Q9H173 461 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 ELAC1Q9H777 363 aaKnown RBP6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 ATAD3AQ9NVI7 634 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 EPS15L1Q9UBC2 864 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 TNRQ92752 1358 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 A0A1W2PQ67 120 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 FAM221AA4D161 298 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 TMEM232C9JQI7 657 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 PI4K2BG5E9Z4 385 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 PPP1R37O75864 691 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 BCRP11274 1271 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 ARFIP1P53367 373 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 EVCP57679 992 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 EXOSC9Q06265 439 aaKnown RBP6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 PICALMQ13492 652 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 C15orf59Q2T9L4 293 aaPredicted RBP6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 ZNF792Q3KQV3 632 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 IQUBQ8NA54 791 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 OR52K2Q8NGK3 314 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 PI4K2BQ8TCG2 481 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 CDKL2Q92772 493 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 FAM20AQ96MK3 541 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 ATP13A1Q9HD20 1204 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 TSR3Q9UJK0 312 aaKnown RBP6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 PNMA3Q9UL41 463 aa6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 R3HDM2Q9Y2K5 976 aaKnown RBP6.35□□□□□ -1.39
COL4A3BP-207ENST00000604926 BLMP54132 1417 aaPredicted RBP6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 GOLGA8IPA6NC78 632 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 CAPN14A8MX76 684 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 RHOXF2BP0C7M4 288 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 RPS2P15880 293 aaKnown RBP6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 ATP5JP18859 108 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 VPS41P49754 854 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 SULT1E1P49888 294 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 KPNA1P52294 538 aaPredicted RBP6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 GSTO1P78417 241 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 MMEL1Q495T6 779 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 HABP4Q5JVS0 413 aaKnown RBP6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 TLDC1Q6P9B6 456 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 IGF2-ASQ6U949 168 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 B4GALNT4Q76KP1 1039 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 ZNF619Q8N2I2 560 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 SMC1BQ8NDV3 1235 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 DEPTORQ8TB45 409 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 RNF139Q8WU17 664 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 CACTINQ8WUQ7 758 aaKnown RBP6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 DHX58Q96C10 678 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 DTNBP1Q96EV8 351 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 RHOXF2Q9BQY4 288 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 NUDT16L1Q9BRJ7 211 aaKnown RBP6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 UPF3BQ9BZI7 483 aaKnown RBP6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 STK32BQ9NY57 414 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 PCDHGB5Q9Y5G0 923 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 PSDA5PKW4 1024 aaPredicted RBP6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 H0Y626 953 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 CETN3O15182 167 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms