RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 CCDC39Q9UFE4 941 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 ABCF2Q9UG63 623 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 SYNPO2Q9UMS6 1093 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 TMEM98Q9Y2Y6 226 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 FSD2A1L4K1 749 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.23□□□□□ -1.41
TUBE1-209ENST00000604814 B4E171 279 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 NOP56O00567 594 aaKnown RBP6.23□□□□□ -1.41
TUBE1-209ENST00000604814 KPNA5O15131 536 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 NCK2O43639 380 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 TUSC2O75896 110 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 SLITRK5O94991 958 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 TBX18O95935 607 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 RAC2P15153 192 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 ATP2A2P16615 1042 aaKnown RBP6.23□□□□□ -1.41
TUBE1-209ENST00000604814 PSMA3P25788 255 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 MAPK10P53779 464 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 KRT83P78385 493 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 PLIN5Q00G26 463 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 SLC10A5Q5PT55 438 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 MFSD4BQ5TF39 518 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 ANKRD34AQ69YU3 496 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 ESX1Q8N693 406 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 ZNF513Q8N8E2 541 aaPredicted RBP6.23□□□□□ -1.41
TUBE1-209ENST00000604814 C12orf50Q8NA57 414 aaPredicted RBP6.23□□□□□ -1.41
TUBE1-209ENST00000604814 PCYOX1LQ8NBM8 494 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 KCTD13Q8WZ19 329 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 XPO4Q9C0E2 1151 aaKnown RBP6.23□□□□□ -1.41
TUBE1-209ENST00000604814 KLHL25Q9H0H3 589 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 NUP62CLQ9H1M0 184 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 UBN1Q9NPG3 1134 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 GGA3Q9NZ52 723 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 PPARGC1AQ9UBK2 798 aaKnown RBP6.23□□□□□ -1.41
TUBE1-209ENST00000604814 PCDHA4Q9UN74 947 aa6.23□□□□□ -1.41
TUBE1-209ENST00000604814 MAGED2Q9UNF1 606 aaPredicted RBP6.23□□□□□ -1.41
TUBE1-209ENST00000604814 ASXL2Q76L83 1435 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 MEGF11A6BM72 1044 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 CHURC1-FNTBB4DL54 471 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 TRAF5O00463 557 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 DYRK3O43781 588 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 DDX58O95786 925 aaKnown RBP6.22□□□□□ -1.41
TUBE1-209ENST00000604814 CSTBP04080 98 aaKnown RBP6.22□□□□□ -1.41
TUBE1-209ENST00000604814 H2AFB1P0C5Y9 115 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 H2AFB2P0C5Z0 115 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 FXR1P51114 621 aaKnown RBP eCLIP6.22□□□□□ -1.41
TUBE1-209ENST00000604814 GUCY1A3Q02108 690 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 SF1Q15637 639 aaKnown RBP6.22□□□□□ -1.41
TUBE1-209ENST00000604814 RILPL1Q5EBL4 403 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 EXOSC6Q5RKV6 272 aaKnown RBP6.22□□□□□ -1.41
TUBE1-209ENST00000604814 GJC2Q5T442 439 aaPredicted RBP6.22□□□□□ -1.41
TUBE1-209ENST00000604814 RNF220Q5VTB9 566 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 BROXQ5VW32 411 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 IZUMO3Q5VZ72 239 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 SCARA3Q6AZY7 606 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 CCDC129Q6ZRS4 1044 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 ENOSF1Q7L5Y1 443 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 UBE2Q1Q7Z7E8 422 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 KRT78Q8N1N4 520 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 AFAP1L1Q8TED9 768 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 IPCEF1Q8WWN9 437 aaPredicted RBP6.22□□□□□ -1.41
TUBE1-209ENST00000604814 JADE3Q92613 823 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 UTP4Q969X6 686 aaKnown RBP6.22□□□□□ -1.41
TUBE1-209ENST00000604814 ARL8AQ96BM9 186 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 PLPPR2Q96GM1 343 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 TMEM169Q96HH4 297 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 B3GNT5Q9BYG0 378 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 CYP4F12Q9HCS2 524 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 CYP26B1Q9NR63 512 aa6.22□□□□□ -1.41
TUBE1-209ENST00000604814 NFKBIL1Q9UBC1 381 aaPredicted RBP6.22□□□□□ -1.41
TUBE1-209ENST00000604814 TRIM64A6NGJ6 449 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 TRIM64BA6NI03 449 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 RHPN2P1A8MT19 583 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 C19orf81C9J6K1 198 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 GAS2O43903 313 aaKnown RBP6.21□□□□□ -1.41
TUBE1-209ENST00000604814 DLGAP3O95886 979 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 POU2F2P09086 479 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 ATP1A3P13637 1013 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 CNTFP26441 200 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 CAP2P40123 477 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 PPP2R5CQ13362 524 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 PSMD6Q15008 389 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 FAM209BQ5JX69 171 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 HP1BP3Q5SSJ5 553 aaPredicted RBP6.21□□□□□ -1.41
TUBE1-209ENST00000604814 ZNF449Q6P9G9 518 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 HEATR4Q86WZ0 1026 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 DENND1CQ8IV53 801 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 TMEM192Q8IY95 271 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 APPL2Q8NEU8 664 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 ZSCAN18Q8TBC5 510 aaPredicted RBP6.21□□□□□ -1.41
TUBE1-209ENST00000604814 SH3KBP1Q96B97 665 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 VMP1Q96GC9 406 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 LSM14BQ9BX40 385 aaKnown RBP6.21□□□□□ -1.41
TUBE1-209ENST00000604814 RAD18Q9NS91 495 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 H2AFY2Q9P0M6 372 aaPredicted RBP6.21□□□□□ -1.41
TUBE1-209ENST00000604814 GIMAP2Q9UG22 337 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 CORO2BQ9UQ03 480 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 PCDHGB2Q9Y5G2 931 aa6.21□□□□□ -1.41
TUBE1-209ENST00000604814 GOLGA8AA7E2F4 631 aa6.21□□□□□ -1.42
TUBE1-209ENST00000604814 GOLGA8BA8MQT2 603 aa6.21□□□□□ -1.42
TUBE1-209ENST00000604814 AQP7O14520 342 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms