RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 RNF40O75150 1001 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 ASMTLO95671 621 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 RB1P06400 928 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 SDHBP21912 280 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 CCNA1P78396 465 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 PURAQ00577 322 aaKnown RBP3.37□□□□□ -1.87
VCAM1-205ENST00000603679 GPNMBQ14956 572 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 SLMAPQ14BN4 828 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 INF2Q27J81 1249 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 MFSD14CQ5VZR4 134 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 ATF7IPQ6VMQ6 1270 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 FAM47EQ6ZV65 393 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 JAMLQ86YT9 394 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 TCEAL8Q8IYN2 117 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 ZDHHC14Q8IZN3 488 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 CCDC24Q8N4L8 307 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 GPR161Q8N6U8 529 aaKnown RBP3.37□□□□□ -1.87
VCAM1-205ENST00000603679 P2RX5Q93086 422 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 TIFAQ96CG3 184 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 PABPC5Q96DU9 382 aaKnown RBP3.37□□□□□ -1.87
VCAM1-205ENST00000603679 ZFRQ96KR1 1074 aaKnown RBP3.37□□□□□ -1.87
VCAM1-205ENST00000603679 UHRF1Q96T88 793 aaPredicted RBP3.37□□□□□ -1.87
VCAM1-205ENST00000603679 DCTPP1Q9H773 170 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 MAPK8IP3Q9UPT6 1336 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 MUC22E2RYF6 1773 aaPredicted RBP3.37□□□□□ -1.87
VCAM1-205ENST00000603679 ERVH48-1M5A8F1 160 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 TNFRSF21O75509 655 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 NBPF7P0C2Y1 421 aaPredicted RBP3.36□□□□□ -1.87
VCAM1-205ENST00000603679 HOXB1P14653 301 aaPredicted RBP3.36□□□□□ -1.87
VCAM1-205ENST00000603679 RRM1P23921 792 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 PBX2P40425 430 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 RPS26P62854 115 aaKnown RBP3.36□□□□□ -1.87
VCAM1-205ENST00000603679 NFKB2Q00653 900 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 MTERF2Q49AM1 385 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 MFSD14BQ5SR56 506 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 RSPO2Q6UXX9 243 aaPredicted RBP3.36□□□□□ -1.87
VCAM1-205ENST00000603679 ALDH16A1Q8IZ83 802 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 C19orf47Q8N9M1 422 aaKnown RBP3.36□□□□□ -1.87
VCAM1-205ENST00000603679 BAP1Q92560 729 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 FOXJ1Q92949 421 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 CRBNQ96SW2 442 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 CDCA3Q99618 268 aaPredicted RBP3.36□□□□□ -1.87
VCAM1-205ENST00000603679 RIOK1Q9BRS2 568 aaKnown RBP3.36□□□□□ -1.87
VCAM1-205ENST00000603679 SIL1Q9H173 461 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 ALDH8A1Q9H2A2 487 aaPredicted RBP3.36□□□□□ -1.87
VCAM1-205ENST00000603679 RABEP2Q9H5N1 569 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 ZNF576Q9H609 170 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 ANKIB1Q9P2G1 1089 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 MAPK8IP1Q9UQF2 711 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 LZTS1Q9Y250 596 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 TMX2Q9Y320 296 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 SYNRGQ9UMZ2 1314 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 TMEM8BA6NDV4 472 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 BHMG1C9JSJ3 638 aaPredicted RBP3.36□□□□□ -1.87
VCAM1-205ENST00000603679 EYA2O00167 538 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 WDR46O15213 610 aaKnown RBP3.36□□□□□ -1.87
VCAM1-205ENST00000603679 PPFIA3O75145 1194 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 RFPL1O75677 317 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 CDC27P30260 824 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 CCND3P30281 292 aaPredicted RBP3.36□□□□□ -1.87
VCAM1-205ENST00000603679 MCL1Q07820 350 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 TRIM29Q14134 588 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 C8orf34Q49A92 452 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 PTCRAQ6ISU1 281 aaPredicted RBP3.36□□□□□ -1.87
VCAM1-205ENST00000603679 TREML1Q86YW5 311 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 SIAH1Q8IUQ4 282 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 TSR2Q969E8 191 aaKnown RBP3.36□□□□□ -1.87
VCAM1-205ENST00000603679 TXNRD2Q9NNW7 524 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 PI4KBQ9UBF8 816 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 STK39Q9UEW8 545 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 VPS9D1Q9Y2B5 631 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 NPTXRO95502 500 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 UBE3AQ05086 875 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 MVPQ14764 893 aaKnown RBP3.36□□□□□ -1.87
VCAM1-205ENST00000603679 C4orf48Q5BLP8 95 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 C7orf61Q8IZ16 206 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 REXO1Q8N1G1 1221 aaKnown RBP3.36□□□□□ -1.87
VCAM1-205ENST00000603679 CELF2-AS1Q8N7Q2 184 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 NPLOC4Q8TAT6 608 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 CAGE1Q8TC20 777 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 GPR152Q8TDT2 470 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 ATRIPQ8WXE1 791 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 DEFB118Q96PH6 123 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 ARPC5LQ9BPX5 153 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 AGXT2Q9BYV1 514 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 CEP44Q9C0F1 390 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 DDX4Q9NQI0 724 aaKnown RBP3.36□□□□□ -1.87
VCAM1-205ENST00000603679 ENAMQ9NRM1 1142 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 PCDHAC2Q9Y5I4 1007 aa3.36□□□□□ -1.87
VCAM1-205ENST00000603679 MORC2Q9Y6X9 1032 aaPredicted RBP3.36□□□□□ -1.87
VCAM1-205ENST00000603679 PHACTR2O75167 634 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 GADD45BO75293 160 aaPredicted RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 TDGF1P13385 188 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 IL15P40933 162 aaPredicted RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 SCTRP47872 440 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 MRE11P49959 708 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 EVCP57679 992 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 ADAM17P78536 824 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 IFIT5Q13325 482 aaKnown RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 SMAD4Q13485 552 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms