RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 TERF2Q15554 542 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 GCFC2P16383 781 aaKnown RBP10.31□□□□□ -0.76
CSMD1-217ENST00000602723 ICA1LQ8NDH6 482 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 PARVGQ9HBI0 331 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 PZPP20742 1482 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 PPP1R12AO14974 1030 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-217ENST00000602723 TJP3O95049 919 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 GGCXP38435 758 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 DYNC1I2Q13409 638 aaKnown RBP10.3□□□□□ -0.76
CSMD1-217ENST00000602723 LRRC41Q15345 812 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 GADL1Q6ZQY3 521 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 SAYSD1Q9NPB0 183 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 NDE1Q9NXR1 346 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 STK32BQ9NY57 414 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 ADAM21Q9UKJ8 722 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 HOXA7P31268 230 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-217ENST00000602723 ADCK5Q3MIX3 580 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 GPATCH4Q5T3I0 446 aaKnown RBP10.3□□□□□ -0.76
CSMD1-217ENST00000602723 PER1O15534 1290 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-217ENST00000602723 EIF4A1P60842 406 aaKnown RBP10.3□□□□□ -0.76
CSMD1-217ENST00000602723 THOC1Q96FV9 657 aaKnown RBP10.3□□□□□ -0.76
CSMD1-217ENST00000602723 IRAK4Q9NWZ3 460 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 CLIC2O15247 247 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 ADAMTS12P58397 1594 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 COPEO14579 308 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 CHUKO15111 745 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 FOXD4Q12950 439 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-217ENST00000602723 ARL13BQ3SXY8 428 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 DNAJC17Q9NVM6 304 aaKnown RBP10.3□□□□□ -0.76
CSMD1-217ENST00000602723 STOML1Q9UBI4 398 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 TRPC5Q9UL62 973 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-217ENST00000602723 ZBTB38Q8NAP3 1195 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-217ENST00000602723 NACC1Q96RE7 527 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.3□□□□□ -0.76
CSMD1-217ENST00000602723 TMEM206Q9H813 350 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 ZWILCHQ9H900 591 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 MRPL40Q9NQ50 206 aaKnown RBP10.3□□□□□ -0.76
CSMD1-217ENST00000602723 SAMSN1Q9NSI8 373 aaKnown RBP10.3□□□□□ -0.76
CSMD1-217ENST00000602723 E9PMD0 336 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 PYGBP11216 843 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 MYH11P35749 1972 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 FRA10AC1Q70Z53 315 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 SPICE1Q8N0Z3 855 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 VPS39Q96JC1 886 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 FTOQ9C0B1 505 aaKnown RBP eCLIP10.3□□□□□ -0.76
CSMD1-217ENST00000602723 MMP1P03956 469 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 PAMP19021 973 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 MIS18BP1Q6P0N0 1132 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 KCNV2Q8TDN2 545 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 TTC17Q96AE7 1141 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 BTBD6Q96KE9 485 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 KLC2Q9H0B6 622 aa10.3□□□□□ -0.76
CSMD1-217ENST00000602723 MAP1BP46821 2468 aaKnown RBP10.3□□□□□ -0.76
CSMD1-217ENST00000602723 NCKAP5LQ9HCH0 1330 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 PALMO75781 387 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 RASGRP4Q8TDF6 673 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 PAWRQ96IZ0 340 aaKnown RBP10.29□□□□□ -0.76
CSMD1-217ENST00000602723 OLFM3Q96PB7 478 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 INO80B-WBP1J3KQ70 363 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 RWDD2BP57060 319 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 PSMD2Q13200 908 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 HSPH1Q92598 858 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 INO80BQ9C086 356 aaPredicted RBP10.29□□□□□ -0.76
CSMD1-217ENST00000602723 SLC24A3Q9HC58 644 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 MAGOHP61326 146 aaKnown RBP10.29□□□□□ -0.76
CSMD1-217ENST00000602723 CAPRIN1Q14444 709 aaKnown RBP10.29□□□□□ -0.76
CSMD1-217ENST00000602723 PPP4R3CPQ6ZMV5 832 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 RGS9BPQ6ZS82 235 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 METTL23Q86XA0 190 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 GINM1Q9NU53 330 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 CROCC2H7BZ55 1655 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 DIAPH2O60879 1101 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 SZRD1Q7Z422 152 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 HLA-DPA1P20036 260 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 TTLL11Q8NHH1 800 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 TGS1Q96RS0 853 aaKnown RBP10.29□□□□□ -0.76
CSMD1-217ENST00000602723 STAT2P52630 851 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 ZMYM1Q5SVZ6 1142 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 TTLL7Q6ZT98 887 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 MAP4K1Q92918 833 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 PTPRTO14522 1441 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 YEATS2Q9ULM3 1422 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 F8W8V4 182 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 ZNF18P17022 549 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 SOX5P35711 763 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 GYS2P54840 703 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 DNAJC10Q8IXB1 793 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 DDX17Q92841 729 aaKnown RBP10.29□□□□□ -0.76
CSMD1-217ENST00000602723 FAF2Q96CS3 445 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 PAGE5Q96GU1 130 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 STX18Q9P2W9 335 aaKnown RBP10.29□□□□□ -0.76
CSMD1-217ENST00000602723 NXF1Q9UBU9 619 aaKnown RBP10.29□□□□□ -0.76
CSMD1-217ENST00000602723 STRIP2Q9ULQ0 834 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 ERVV-2B6SEH9 535 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 CD58P19256 250 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 PDXDC1Q6P996 788 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 HACD3Q9P035 362 aa10.29□□□□□ -0.76
CSMD1-217ENST00000602723 ATXN8OSP0DMR3 200 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 KRT4P19013 534 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 CCND2P30279 289 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms