RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 ATP4AP20648 1035 aa16.05■□□□□ 0.16
UPF1-211ENST00000600868 PURAQ00577 322 aaKnown RBP16.05■□□□□ 0.16
UPF1-211ENST00000600868 SNW1Q13573 536 aaKnown RBP16.05■□□□□ 0.16
UPF1-211ENST00000600868 LRRC41Q15345 812 aa16.05■□□□□ 0.16
UPF1-211ENST00000600868 E2F4Q16254 413 aa16.05■□□□□ 0.16
UPF1-211ENST00000600868 TRIM50Q86XT4 487 aa16.05■□□□□ 0.16
UPF1-211ENST00000600868 FMR1NBQ8N0W7 255 aaPredicted RBP16.05■□□□□ 0.16
UPF1-211ENST00000600868 PDILTQ8N807 584 aa16.05■□□□□ 0.16
UPF1-211ENST00000600868 IQUBQ8NA54 791 aa16.05■□□□□ 0.16
UPF1-211ENST00000600868 DEFB118Q96PH6 123 aa16.05■□□□□ 0.16
UPF1-211ENST00000600868 TSEN34Q9BSV6 310 aaKnown RBP16.05■□□□□ 0.16
UPF1-211ENST00000600868 CUEDC2Q9H467 287 aa16.05■□□□□ 0.16
UPF1-211ENST00000600868 ZNF215Q9UL58 517 aaPredicted RBP16.05■□□□□ 0.16
UPF1-211ENST00000600868 OGDHLQ9ULD0 1010 aa16.05■□□□□ 0.16
UPF1-211ENST00000600868 H3BRB1 525 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 ZNF202O95125 648 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 F2P00734 622 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 GJB1P08034 283 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 MYL3P08590 195 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 ZNF286BP0CG31 522 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 LIG1P18858 919 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 PRKCEQ02156 737 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 NFKBIBQ15653 356 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 KCNA10Q16322 511 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 NAALADL2Q58DX5 795 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 XKR3Q5GH77 459 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 ATP8B4Q8TF62 1192 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 LRRC15Q8TF66 581 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 KAT2BQ92831 832 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 FAM167AQ96KS9 214 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 PLIN2Q99541 437 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 MTG1Q9BT17 334 aaPredicted RBP16.04■□□□□ 0.16
UPF1-211ENST00000600868 CRISPLD2Q9H0B8 497 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 TUT1Q9H6E5 874 aaKnown RBP16.04■□□□□ 0.16
UPF1-211ENST00000600868 ANKEF1Q9NU02 776 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 DBR1Q9UK59 544 aaKnown RBP16.04■□□□□ 0.16
UPF1-211ENST00000600868 DNM3Q9UQ16 869 aa16.04■□□□□ 0.16
UPF1-211ENST00000600868 HAS3O00219 553 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 NR1I2O75469 434 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 SGPL1O95470 568 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 EYA4O95677 639 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 MBD3O95983 291 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 OATP04181 439 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 CAPN2P17655 700 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 YWHABP31946 246 aaKnown RBP16.03■□□□□ 0.16
UPF1-211ENST00000600868 STAT6P42226 847 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 PSMC6P62333 389 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 PLCB4Q15147 1175 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 OTUD6AQ7L8S5 288 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 KCNK18Q7Z418 384 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 CKAP2LQ8IYA6 745 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 GPT2Q8TD30 523 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 BBXQ8WY36 941 aaPredicted RBP16.03■□□□□ 0.16
UPF1-211ENST00000600868 DHX58Q96C10 678 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 TIGD1Q96MW7 591 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 KATNAL1Q9BW62 490 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 NIFKQ9BYG3 293 aaKnown RBP16.03■□□□□ 0.16
UPF1-211ENST00000600868 MAGEF1Q9HAY2 307 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 NRBP2Q9NSY0 501 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 BLOC1S4Q9NUP1 217 aa16.03■□□□□ 0.16
UPF1-211ENST00000600868 MOXD2PA6NHM9 499 aa16.02■□□□□ 0.16
UPF1-211ENST00000600868 E9PMD0 336 aa16.02■□□□□ 0.16
UPF1-211ENST00000600868 DNM1LO00429 736 aa16.02■□□□□ 0.16
UPF1-211ENST00000600868 ZBTB39O15060 712 aa16.02■□□□□ 0.16
UPF1-211ENST00000600868 ACTN4O43707 911 aaKnown RBP16.02■□□□□ 0.16
UPF1-211ENST00000600868 HBP1O60381 514 aa16.02■□□□□ 0.16
UPF1-211ENST00000600868 CABYRO75952 493 aa16.02■□□□□ 0.16
UPF1-211ENST00000600868 ASGR1P07306 291 aa16.02■□□□□ 0.16
UPF1-211ENST00000600868 SLFN14P0C7P3 912 aa16.02■□□□□ 0.16
UPF1-211ENST00000600868 MARK3P27448 753 aa16.02■□□□□ 0.16
UPF1-211ENST00000600868 PSEN2P49810 448 aa16.02■□□□□ 0.16
UPF1-211ENST00000600868 LONRF3Q496Y0 759 aa16.02■□□□□ 0.16
UPF1-211ENST00000600868 ANO5Q75V66 913 aa16.02■□□□□ 0.16
UPF1-211ENST00000600868 PIGOQ8TEQ8 1089 aa16.02■□□□□ 0.16
UPF1-211ENST00000600868 U2AF1L4Q8WU68 220 aaKnown RBP16.02■□□□□ 0.16
UPF1-211ENST00000600868 LARP4BQ92615 738 aaKnown RBP16.02■□□□□ 0.16
UPF1-211ENST00000600868 RAD54LQ92698 747 aa16.02■□□□□ 0.16
UPF1-211ENST00000600868 RNPEPQ9H4A4 650 aa16.02■□□□□ 0.16
UPF1-211ENST00000600868 PPME1Q9Y570 386 aa16.02■□□□□ 0.16
UPF1-211ENST00000600868 LOXHD1Q8IVV2 1947 aa16.02■□□□□ 0.15
UPF1-211ENST00000600868 CENPFP49454 3210 aa16.01■□□□□ 0.15
UPF1-211ENST00000600868 A0A087WWV3 80 aa16.01■□□□□ 0.15
UPF1-211ENST00000600868 MYCNP04198 464 aaPredicted RBP16.01■□□□□ 0.15
UPF1-211ENST00000600868 PLA2G4BP0C869 781 aa16.01■□□□□ 0.15
UPF1-211ENST00000600868 ACLYP53396 1101 aa16.01■□□□□ 0.15
UPF1-211ENST00000600868 MFSD10Q14728 455 aa16.01■□□□□ 0.15
UPF1-211ENST00000600868 CXCL17Q6UXB2 119 aa16.01■□□□□ 0.15
UPF1-211ENST00000600868 KRBA2Q6ZNG9 492 aa16.01■□□□□ 0.15
UPF1-211ENST00000600868 ELOA2Q8IYF1 753 aaPredicted RBP16.01■□□□□ 0.15
UPF1-211ENST00000600868 CEP57L1Q8IYX8 460 aa16.01■□□□□ 0.15
UPF1-211ENST00000600868 SYT2Q8N9I0 419 aaPredicted RBP16.01■□□□□ 0.15
UPF1-211ENST00000600868 BHMT2Q9H2M3 363 aa16.01■□□□□ 0.15
UPF1-211ENST00000600868 KBTBD4Q9NVX7 518 aa16.01■□□□□ 0.15
UPF1-211ENST00000600868 DACT1Q9NYF0 836 aa16.01■□□□□ 0.15
UPF1-211ENST00000600868 SEPT9Q9UHD8 586 aaPredicted RBP16.01■□□□□ 0.15
UPF1-211ENST00000600868 SERTAD1Q9UHV2 236 aa16.01■□□□□ 0.15
UPF1-211ENST00000600868 PHF24Q9UPV7 400 aa16.01■□□□□ 0.15
UPF1-211ENST00000600868 SCN10AQ9Y5Y9 1956 aa16■□□□□ 0.15
UPF1-211ENST00000600868 KBTBD13C9JR72 458 aa16■□□□□ 0.15
UPF1-211ENST00000600868 KINO60870 393 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms