RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 BAIAP3O94812 1187 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 CHRNA1P02708 482 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 RPLP2P05387 115 aaKnown RBP9.94□□□□□ -0.82
SSBP4-208ENST00000600628 SFNP31947 248 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 KRT2P35908 639 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 PPFIA1Q13136 1202 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 CUL4AQ13619 759 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 TARBP2Q15633 366 aaKnown RBP9.94□□□□□ -0.82
SSBP4-208ENST00000600628 PLEKHG4Q58EX7 1191 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 ZNF697Q5TEC3 545 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 POTEBQ6S5H4 581 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 PIK3AP1Q6ZUJ8 805 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 OTOP2Q7RTS6 562 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 DIS3L2Q8IYB7 885 aaKnown RBP9.94□□□□□ -0.82
SSBP4-208ENST00000600628 GLG1Q92896 1179 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 MTIF3Q9H2K0 278 aaKnown RBP9.94□□□□□ -0.82
SSBP4-208ENST00000600628 FOXP1Q9H334 677 aaPredicted RBP9.94□□□□□ -0.82
SSBP4-208ENST00000600628 SEMA6BQ9H3T3 888 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 UNC45AQ9H3U1 944 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 DISC1Q9NRI5 854 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 DDX25Q9UHL0 483 aaKnown RBP9.94□□□□□ -0.82
SSBP4-208ENST00000600628 TUBE1Q9UJT0 475 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 PCDHA2Q9Y5H9 948 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 SQORQ9Y6N5 450 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 IGKV6-21A0A0C4DH24 114 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 CCDC194A0A1B0GVG4 234 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 SMIM35A0A1B0GVV1 85 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 GRXCR1A8MXD5 290 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 RSPH10B2B2RC85 870 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 EML1O00423 815 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 ST18O60284 1047 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 GAS7O60861 476 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 C22orf31O95567 290 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 RSPH10BP0C881 870 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 MARK3P27448 753 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 MCM2P49736 904 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 UGCGQ16739 394 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 LETM2Q2VYF4 491 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 ZNF484Q5JVG2 852 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 LRCH2Q5VUJ6 765 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 FAM160B1Q5W0V3 765 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 SWSAP1Q6NVH7 229 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 MIS18BP1Q6P0N0 1132 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 CNKSR3Q6P9H4 555 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 DEFB128Q7Z7B8 93 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 KIAA0319LQ8IZA0 1049 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 CRIPAKQ8N1N5 446 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 PHOSPHO2Q8TCD6 241 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 BBXQ8WY36 941 aaPredicted RBP9.93□□□□□ -0.82
SSBP4-208ENST00000600628 NAP1L4Q99733 375 aaKnown RBP9.93□□□□□ -0.82
SSBP4-208ENST00000600628 TTYH1Q9H313 450 aaPredicted RBP9.93□□□□□ -0.82
SSBP4-208ENST00000600628 AZI2Q9H6S1 392 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 ZNF302Q9NR11 478 aa9.93□□□□□ -0.82
SSBP4-208ENST00000600628 RBAK-RBAKDNI3L0D1 243 aa9.92□□□□□ -0.82
SSBP4-208ENST00000600628 DDX39AO00148 427 aaKnown RBP9.92□□□□□ -0.82
SSBP4-208ENST00000600628 PSAPP07602 524 aa9.92□□□□□ -0.82
SSBP4-208ENST00000600628 THPOP40225 353 aa9.92□□□□□ -0.82
SSBP4-208ENST00000600628 PBX2P40425 430 aa9.92□□□□□ -0.82
SSBP4-208ENST00000600628 JAK3P52333 1124 aa9.92□□□□□ -0.82
SSBP4-208ENST00000600628 WDR5P61964 334 aaKnown RBP9.92□□□□□ -0.82
SSBP4-208ENST00000600628 ORC2Q13416 577 aaPredicted RBP9.92□□□□□ -0.82
SSBP4-208ENST00000600628 PDXDC2PQ6P474 469 aa9.92□□□□□ -0.82
SSBP4-208ENST00000600628 MTHFD1LQ6UB35 978 aa9.92□□□□□ -0.82
SSBP4-208ENST00000600628 FAM43BQ6ZT52 329 aaPredicted RBP9.92□□□□□ -0.82
SSBP4-208ENST00000600628 POTEDQ86YR6 584 aa9.92□□□□□ -0.82
SSBP4-208ENST00000600628 C4orf32Q8N8J7 132 aa9.92□□□□□ -0.82
SSBP4-208ENST00000600628 TRAPPC12Q8WVT3 735 aa9.92□□□□□ -0.82
SSBP4-208ENST00000600628 TNPO1Q92973 898 aaKnown RBP9.92□□□□□ -0.82
SSBP4-208ENST00000600628 FAM161BQ96MY7 647 aa9.92□□□□□ -0.82
SSBP4-208ENST00000600628 GUCD1Q96NT3 240 aa9.92□□□□□ -0.82
SSBP4-208ENST00000600628 UIMC1Q96RL1 719 aa9.92□□□□□ -0.82
SSBP4-208ENST00000600628 TEKT3Q9BXF9 490 aa9.92□□□□□ -0.82
SSBP4-208ENST00000600628 NIFKQ9BYG3 293 aaKnown RBP9.92□□□□□ -0.82
SSBP4-208ENST00000600628 PBX4Q9BYU1 374 aa9.92□□□□□ -0.82
SSBP4-208ENST00000600628 UPF2Q9HAU5 1272 aaKnown RBP9.92□□□□□ -0.82
SSBP4-208ENST00000600628 STXBP5LQ9Y2K9 1186 aa9.92□□□□□ -0.82
SSBP4-208ENST00000600628 SLC4A7Q9Y6M7 1214 aa9.92□□□□□ -0.82
SSBP4-208ENST00000600628 ABHD14A-ACY1A0A1B0GW23 586 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.91□□□□□ -0.82
SSBP4-208ENST00000600628 KIF28PB7ZC32 967 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 EFCAB14O75071 495 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 ACTN1P12814 892 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 DNAJB2P25686 324 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 TRAPPC10P48553 1259 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 TOB1P50616 345 aaPredicted RBP9.91□□□□□ -0.82
SSBP4-208ENST00000600628 FBXO47Q5MNV8 452 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 NOSTRINQ8IVI9 506 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 NME8Q8N427 588 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 DBF4BQ8NFT6 615 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 DNAJB3Q8WWF6 145 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 TIFAQ96CG3 184 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 ZBTB10Q96DT7 871 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 C8orf76Q96K31 380 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 FAM167AQ96KS9 214 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 CDX2Q99626 313 aaPredicted RBP9.91□□□□□ -0.82
SSBP4-208ENST00000600628 HSD17B14Q9BPX1 270 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 FTOQ9C0B1 505 aaKnown RBP eCLIP9.91□□□□□ -0.82
SSBP4-208ENST00000600628 TMEM60Q9H2L4 133 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 BRMS1Q9HCU9 246 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 WRAP73Q9P2S5 460 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms