RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 STX17P56962 302 aa16.85■□□□□ 0.29
VRK3-218ENST00000600031 EHHADHQ08426 723 aa16.85■□□□□ 0.29
VRK3-218ENST00000600031 NCBP1Q09161 790 aaKnown RBP16.85■□□□□ 0.29
VRK3-218ENST00000600031 SREBF2Q12772 1141 aa16.85■□□□□ 0.29
VRK3-218ENST00000600031 GRB14Q14449 540 aa16.85■□□□□ 0.29
VRK3-218ENST00000600031 PAXIP1Q6ZW49 1069 aaPredicted RBP16.85■□□□□ 0.29
VRK3-218ENST00000600031 PLEKHH3Q7Z736 793 aa16.85■□□□□ 0.29
VRK3-218ENST00000600031 RDM1Q8NG50 284 aa16.85■□□□□ 0.29
VRK3-218ENST00000600031 RUSC1Q9BVN2 902 aa16.85■□□□□ 0.29
VRK3-218ENST00000600031 PCDHA10Q9Y5I2 948 aa16.85■□□□□ 0.29
VRK3-218ENST00000600031 TLR2O60603 784 aa16.84■□□□□ 0.29
VRK3-218ENST00000600031 ECM2O94769 699 aaPredicted RBP16.84■□□□□ 0.29
VRK3-218ENST00000600031 TM4SF4P48230 202 aa16.84■□□□□ 0.29
VRK3-218ENST00000600031 ACTR2P61160 394 aa16.84■□□□□ 0.29
VRK3-218ENST00000600031 GIT2Q14161 759 aa16.84■□□□□ 0.29
VRK3-218ENST00000600031 C17orf99Q6UX52 265 aa16.84■□□□□ 0.29
VRK3-218ENST00000600031 FBXO16Q8IX29 292 aaPredicted RBP16.84■□□□□ 0.29
VRK3-218ENST00000600031 ADSSL1Q8N142 457 aa16.84■□□□□ 0.29
VRK3-218ENST00000600031 KIAA0895Q8NCT3 520 aa16.84■□□□□ 0.29
VRK3-218ENST00000600031 SLC39A2Q9NP94 309 aa16.84■□□□□ 0.29
VRK3-218ENST00000600031 PANK4Q9NVE7 773 aa16.84■□□□□ 0.29
VRK3-218ENST00000600031 FANCLQ9NW38 375 aa16.84■□□□□ 0.29
VRK3-218ENST00000600031 CTNND2Q9UQB3 1225 aa16.84■□□□□ 0.29
VRK3-218ENST00000600031 LOC102724159A0A0B4J2E5 919 aa16.84■□□□□ 0.29
VRK3-218ENST00000600031 ARIH2O95376 493 aa16.84■□□□□ 0.29
VRK3-218ENST00000600031 KCNJ6P48051 423 aa16.84■□□□□ 0.29
VRK3-218ENST00000600031 COASYQ13057 564 aa16.84■□□□□ 0.29
VRK3-218ENST00000600031 PWP2Q15269 919 aaKnown RBP16.84■□□□□ 0.29
VRK3-218ENST00000600031 RINT1Q6NUQ1 792 aa16.84■□□□□ 0.29
VRK3-218ENST00000600031 CCAR2Q8N163 923 aaKnown RBP16.84■□□□□ 0.29
VRK3-218ENST00000600031 ASB14A6NK59 587 aa16.83■□□□□ 0.28
VRK3-218ENST00000600031 NRDCO43847 1150 aa16.83■□□□□ 0.28
VRK3-218ENST00000600031 LYPLA2O95372 231 aa16.83■□□□□ 0.28
VRK3-218ENST00000600031 KRT18P05783 430 aaKnown RBP16.83■□□□□ 0.28
VRK3-218ENST00000600031 TGFB3P10600 412 aa16.83■□□□□ 0.28
VRK3-218ENST00000600031 PSMC5P62195 406 aa16.83■□□□□ 0.28
VRK3-218ENST00000600031 LY6KQ17RY6 165 aa16.83■□□□□ 0.28
VRK3-218ENST00000600031 WDR81Q562E7 1941 aa16.83■□□□□ 0.28
VRK3-218ENST00000600031 ARMCX2Q7L311 632 aa16.83■□□□□ 0.28
VRK3-218ENST00000600031 REEP2Q9BRK0 252 aa16.83■□□□□ 0.28
VRK3-218ENST00000600031 CGNQ9P2M7 1197 aaKnown RBP16.83■□□□□ 0.28
VRK3-218ENST00000600031 NFE2L3Q9Y4A8 694 aa16.83■□□□□ 0.28
VRK3-218ENST00000600031 SYNRGQ9UMZ2 1314 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 FRMD3A2A2Y4 597 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 CRHR2Q13324 411 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 ABHD15Q6UXT9 468 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 C1orf186Q6ZWK4 172 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 DPP9Q86TI2 863 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 CCDC65Q8IXS2 484 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 C4orf19Q8IY42 314 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 NELFBQ8WX92 580 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 XPO4Q9C0E2 1151 aaKnown RBP16.82■□□□□ 0.28
VRK3-218ENST00000600031 ZFYVE28Q9HCC9 887 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 POLD4Q9HCU8 107 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 GABBR1Q9UBS5 961 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 DDX41Q9UJV9 622 aaKnown RBP16.82■□□□□ 0.28
VRK3-218ENST00000600031 DOCK3Q8IZD9 2030 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 USP27XA6NNY8 438 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 RSPH10B2B2RC85 870 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 FARP2O94887 1054 aaPredicted RBP16.82■□□□□ 0.28
VRK3-218ENST00000600031 PSAPP07602 524 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 RSPH10BP0C881 870 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 ATP1A3P13637 1013 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 PAK1Q13153 545 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 SWSAP1Q6NVH7 229 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 TRMT1LQ7Z2T5 733 aaKnown RBP16.82■□□□□ 0.28
VRK3-218ENST00000600031 GLIS3Q8NEA6 775 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 ZNF592Q92610 1267 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 PDGFCQ9NRA1 345 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 IFNKQ9P0W0 207 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 RWDD2AQ9UIY3 292 aa16.82■□□□□ 0.28
VRK3-218ENST00000600031 SYNGAP1Q96PV0 1343 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 TMEM150BA6NC51 233 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 ZNF862O60290 1169 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 GGPS1O95749 300 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 TUBB4AP04350 444 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 YWHABP31946 246 aaKnown RBP16.81■□□□□ 0.28
VRK3-218ENST00000600031 PSMD2Q13200 908 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 NEDD9Q14511 834 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 HSP90AA4PQ58FG1 418 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 SPATA1Q5VX52 437 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 ZNF467Q7Z7K2 595 aaPredicted RBP16.81■□□□□ 0.28
VRK3-218ENST00000600031 CCDC60Q8IWA6 550 aaPredicted RBP16.81■□□□□ 0.28
VRK3-218ENST00000600031 ZHX3Q9H4I2 956 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 SAMSN1Q9NSI8 373 aaKnown RBP16.81■□□□□ 0.28
VRK3-218ENST00000600031 PCDHA2Q9Y5H9 948 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 ARHGEF35A5YM69 484 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 SLC15A5A6NIM6 579 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 ATG7O95352 703 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 SUPT20HL2P0C7V6 817 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 RARRES1P49788 294 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 PMS1P54277 932 aaKnown RBP16.81■□□□□ 0.28
VRK3-218ENST00000600031 COBLL1Q53SF7 1204 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 HERC4Q5GLZ8 1057 aaPredicted RBP16.81■□□□□ 0.28
VRK3-218ENST00000600031 TMEM63BQ5T3F8 832 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 MIS18BP1Q6P0N0 1132 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 CCDC62Q6P9F0 684 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 ZNF784Q8NCA9 323 aaPredicted RBP16.81■□□□□ 0.28
VRK3-218ENST00000600031 KIF18AQ8NI77 898 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 NPLOC4Q8TAT6 608 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms