RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 MAP3K15Q6ZN16 1313 aa12.71□□□□□ -0.37
SCN8A-208ENST00000599343 CYP2D7A0A087X1C5 515 aa12.71□□□□□ -0.37
SCN8A-208ENST00000599343 GOLGA8MH3BSY2 632 aa12.71□□□□□ -0.37
SCN8A-208ENST00000599343 PSMA2P25787 234 aa12.71□□□□□ -0.37
SCN8A-208ENST00000599343 KRT31Q15323 416 aa12.71□□□□□ -0.37
SCN8A-208ENST00000599343 PI16Q6UXB8 463 aa12.71□□□□□ -0.37
SCN8A-208ENST00000599343 TRPC5Q9UL62 973 aaPredicted RBP12.71□□□□□ -0.37
SCN8A-208ENST00000599343 YEATS2Q9ULM3 1422 aa12.71□□□□□ -0.37
SCN8A-208ENST00000599343 ARHGAP27Q6ZUM4 889 aa12.71□□□□□ -0.37
SCN8A-208ENST00000599343 SNX24Q9Y343 169 aa12.71□□□□□ -0.37
SCN8A-208ENST00000599343 TBX22Q9Y458 520 aa12.71□□□□□ -0.37
SCN8A-208ENST00000599343 PALMO75781 387 aa12.71□□□□□ -0.37
SCN8A-208ENST00000599343 SYF2O95926 243 aaKnown RBP12.71□□□□□ -0.37
SCN8A-208ENST00000599343 PDHA1P08559 390 aa12.71□□□□□ -0.37
SCN8A-208ENST00000599343 PNMA6AP0CW24 399 aaPredicted RBP12.71□□□□□ -0.37
SCN8A-208ENST00000599343 RWDD2BP57060 319 aa12.71□□□□□ -0.37
SCN8A-208ENST00000599343 SZRD1Q7Z422 152 aa12.71□□□□□ -0.37
SCN8A-208ENST00000599343 PDIK1LQ8N165 341 aa12.71□□□□□ -0.37
SCN8A-208ENST00000599343 PUS7LQ9H0K6 701 aaKnown RBP12.71□□□□□ -0.37
SCN8A-208ENST00000599343 TRPV6Q9H1D0 765 aa12.71□□□□□ -0.37
SCN8A-208ENST00000599343 ADAMTS1Q9UHI8 967 aa12.71□□□□□ -0.37
SCN8A-208ENST00000599343 ZNF233A6NK53 670 aa12.71□□□□□ -0.38
SCN8A-208ENST00000599343 PPEF1O14829 653 aaPredicted RBP12.71□□□□□ -0.38
SCN8A-208ENST00000599343 GYG2O15488 501 aa12.71□□□□□ -0.38
SCN8A-208ENST00000599343 SRGAP2CP0DJJ0 459 aa12.71□□□□□ -0.38
SCN8A-208ENST00000599343 MCF2P10911 925 aa12.71□□□□□ -0.38
SCN8A-208ENST00000599343 RGS9BPQ6ZS82 235 aa12.71□□□□□ -0.38
SCN8A-208ENST00000599343 ZMAT2Q96NC0 199 aaKnown RBP12.71□□□□□ -0.38
SCN8A-208ENST00000599343 HEMGNQ9BXL5 484 aa12.71□□□□□ -0.38
SCN8A-208ENST00000599343 MLXIPLQ9NP71 852 aa12.71□□□□□ -0.38
SCN8A-208ENST00000599343 NOP53Q9NZM5 478 aaKnown RBP12.71□□□□□ -0.38
SCN8A-208ENST00000599343 F5H423 210 aaPredicted RBP12.71□□□□□ -0.38
SCN8A-208ENST00000599343 COPEO14579 308 aa12.71□□□□□ -0.38
SCN8A-208ENST00000599343 MARK3P27448 753 aa12.71□□□□□ -0.38
SCN8A-208ENST00000599343 HOXA13P31271 388 aaPredicted RBP12.71□□□□□ -0.38
SCN8A-208ENST00000599343 ADD2P35612 726 aa12.71□□□□□ -0.38
SCN8A-208ENST00000599343 MYO1EQ12965 1108 aa12.71□□□□□ -0.38
SCN8A-208ENST00000599343 CUL1Q13616 776 aa12.71□□□□□ -0.38
SCN8A-208ENST00000599343 NUDCD3Q8IVD9 361 aa12.71□□□□□ -0.38
SCN8A-208ENST00000599343 SRPRBQ9Y5M8 271 aaKnown RBP12.71□□□□□ -0.38
SCN8A-208ENST00000599343 RNF123Q5XPI4 1314 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 SEMA3EO15041 775 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 BEND6Q5SZJ8 279 aaPredicted RBP12.7□□□□□ -0.38
SCN8A-208ENST00000599343 SYDE2Q5VT97 1194 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 FAM81BQ96LP2 452 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 SEC31BQ9NQW1 1179 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 STAP2Q9UGK3 403 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 WARS2Q9UGM6 360 aaKnown RBP12.7□□□□□ -0.38
SCN8A-208ENST00000599343 RCOR1Q9UKL0 485 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 DCTN3O75935 186 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 GCFC2P16383 781 aaKnown RBP12.7□□□□□ -0.38
SCN8A-208ENST00000599343 YY1AP1Q9H869 796 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 MID2Q9UJV3 735 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 MFAP3LO75121 409 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 E2F6O75461 281 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 USP17L8P0C7I0 530 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 SPARCL1Q14515 664 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 C16orf87Q6PH81 154 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 ERICH1Q86X53 443 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 TTC30BQ8N4P2 665 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 FGFR1OP2Q9NVK5 253 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 NUP153P49790 1475 aaKnown RBP12.7□□□□□ -0.38
SCN8A-208ENST00000599343 RESTQ13127 1097 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 CAPRIN1Q14444 709 aaKnown RBP12.7□□□□□ -0.38
SCN8A-208ENST00000599343 ALKBH5Q6P6C2 394 aaKnown RBP12.7□□□□□ -0.38
SCN8A-208ENST00000599343 RNF139Q8WU17 664 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 MTRQ99707 1265 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 AP5M1Q9H0R1 490 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 PNMA2Q9UL42 364 aa12.7□□□□□ -0.38
SCN8A-208ENST00000599343 ZSCAN20P17040 1043 aaPredicted RBP12.69□□□□□ -0.38
SCN8A-208ENST00000599343 PPP6R3Q5H9R7 873 aaPredicted RBP12.69□□□□□ -0.38
SCN8A-208ENST00000599343 GRAMD4Q6IC98 578 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 PPP1R2P3Q6NXS1 205 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 CCDC17Q96LX7 622 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 MSTO1Q9BUK6 570 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 COPRSQ9NQ92 184 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 GTSE1Q9NYZ3 720 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.69□□□□□ -0.38
SCN8A-208ENST00000599343 TCOF1Q13428 1488 aaKnown RBP12.69□□□□□ -0.38
SCN8A-208ENST00000599343 XDHP47989 1333 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 WDR64B1ANS9 1081 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 CIAO1O76071 339 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 BMP3P12645 472 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 TAC1P20366 129 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 ZNF394Q53GI3 561 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 TAF1BQ53T94 588 aaPredicted RBP12.69□□□□□ -0.38
SCN8A-208ENST00000599343 TRIM55Q9BYV6 548 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 DBNDD1Q9H9R9 158 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 SFMBT1Q9UHJ3 866 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 ZFP69BQ9UJL9 534 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 USP17L3A6NCW0 530 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 USP17L4A6NCW7 530 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 HADHAP40939 763 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 STAT2P52630 851 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 KIAA1841Q6NSI8 718 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 USP17L1Q7RTZ2 530 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 PASD1Q8IV76 773 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 RAPGEF5Q92565 580 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 YIPF3Q9GZM5 350 aa12.69□□□□□ -0.38
SCN8A-208ENST00000599343 SLC24A3Q9HC58 644 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms