RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 CHURC1-FNTBB4DL54 471 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 TMEM232C9JQI7 657 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 FSCN2O14926 492 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 HRO43593 1189 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 VAMP4O75379 141 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 C1QL1O75973 258 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 EPCAMP16422 314 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 ZAP70P43403 619 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 CDK8P49336 464 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 FNTBP49356 437 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 OAZ1P54368 228 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 GPC5P78333 572 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 KRT17Q04695 432 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 SRSF1Q07955 248 aaKnown RBP eCLIP5.24□□□□□ -1.57
HERC3-213ENST00000598772 UAP1L1Q3KQV9 507 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 TKFCQ3LXA3 575 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 ZBTB41Q5SVQ8 909 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 FAM160A2Q8N612 972 aaPredicted RBP5.24□□□□□ -1.57
HERC3-213ENST00000598772 COLGALT1Q8NBJ5 622 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 RASGRP4Q8TDF6 673 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 SDR42E1Q8WUS8 393 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 BBXQ8WY36 941 aaPredicted RBP5.24□□□□□ -1.57
HERC3-213ENST00000598772 CRELD1Q96HD1 420 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 CCDC17Q96LX7 622 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 CRNKL1Q9BZJ0 848 aaKnown RBP5.24□□□□□ -1.57
HERC3-213ENST00000598772 NGRNQ9NPE2 291 aaKnown RBP5.24□□□□□ -1.57
HERC3-213ENST00000598772 TYW1Q9NV66 732 aaKnown RBP5.24□□□□□ -1.57
HERC3-213ENST00000598772 SWAP70Q9UH65 585 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 CCPG1Q9ULG6 757 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 WASF3Q9UPY6 502 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 MTMR7Q9Y216 660 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 RAXQ9Y2V3 346 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 MSRB2Q9Y3D2 182 aa5.24□□□□□ -1.57
HERC3-213ENST00000598772 SHISA7A6NL88 538 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 NCAM2O15394 837 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 ARID4AP29374 1257 aaPredicted RBP5.23□□□□□ -1.57
HERC3-213ENST00000598772 PBX3P40426 434 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 STARD6P59095 220 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 EXOSC9Q06265 439 aaKnown RBP5.23□□□□□ -1.57
HERC3-213ENST00000598772 ARHGAP1Q07960 439 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 SCAPQ12770 1279 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 MTAPQ13126 283 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 SMC1AQ14683 1233 aaKnown RBP5.23□□□□□ -1.57
HERC3-213ENST00000598772 BMS1Q14692 1282 aaKnown RBP5.23□□□□□ -1.57
HERC3-213ENST00000598772 PPP2R5DQ14738 602 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 LETM2Q2VYF4 491 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 SLC44A4Q53GD3 710 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 CCDC158Q5M9N0 1113 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 DAB2IPQ5VWQ8 1189 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.23□□□□□ -1.57
HERC3-213ENST00000598772 NPAS4Q8IUM7 802 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 AMOTL1Q8IY63 956 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 ZNF843Q8N446 348 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 DEFB124Q8NES8 71 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 MORC4Q8TE76 937 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 AUTS2Q8WXX7 1259 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 MRPS27Q92552 414 aaKnown RBP5.23□□□□□ -1.57
HERC3-213ENST00000598772 KLHL5Q96PQ7 755 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 UBL7Q96S82 380 aaPredicted RBP5.23□□□□□ -1.57
HERC3-213ENST00000598772 FAM126AQ9BYI3 521 aaPredicted RBP5.23□□□□□ -1.57
HERC3-213ENST00000598772 USP44Q9H0E7 712 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 CCDC86Q9H6F5 360 aaKnown RBP5.23□□□□□ -1.57
HERC3-213ENST00000598772 BCAS3Q9H6U6 928 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 RC3H2Q9HBD1 1191 aaKnown RBP5.23□□□□□ -1.57
HERC3-213ENST00000598772 FAM217BQ9NTX9 383 aaPredicted RBP5.23□□□□□ -1.57
HERC3-213ENST00000598772 SETD4Q9NVD3 440 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 DZANK1Q9NVP4 752 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 FBXO3Q9UK99 471 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 NDRG2Q9UN36 371 aaKnown RBP5.23□□□□□ -1.57
HERC3-213ENST00000598772 NEUROG3Q9Y4Z2 214 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 SUPT16HQ9Y5B9 1047 aaKnown RBP5.23□□□□□ -1.57
HERC3-213ENST00000598772 PCDHB7Q9Y5E2 793 aa5.23□□□□□ -1.57
HERC3-213ENST00000598772 URB1O60287 2271 aaKnown RBP5.22□□□□□ -1.57
HERC3-213ENST00000598772 PLXNA4Q9HCM2 1894 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 ACACAQ13085 2346 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.22□□□□□ -1.57
HERC3-213ENST00000598772 C2orf71A6NGG8 1288 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 B4DLN1 442 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 CHRNA1P02708 482 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 ZNF806P0C7X5 589 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 SMIM10L2AP0DMW4 78 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 SMIM10L2BP0DMW5 78 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 BMP3P12645 472 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 CD52P31358 61 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 RDXP35241 583 aaKnown RBP5.22□□□□□ -1.57
HERC3-213ENST00000598772 MRPL12P52815 198 aaKnown RBP5.22□□□□□ -1.57
HERC3-213ENST00000598772 FGD1P98174 961 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 LPIN1Q14693 890 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 MLF2Q15773 248 aaPredicted RBP5.22□□□□□ -1.57
HERC3-213ENST00000598772 FAM102BQ5T8I3 360 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 SLFN13Q68D06 897 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 TCEAL6Q6IPX3 200 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 GPR149Q86SP6 731 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 RTN4RL1Q86UN2 441 aaPredicted RBP5.22□□□□□ -1.57
HERC3-213ENST00000598772 CERS3Q8IU89 383 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 CHCHD4Q8N4Q1 142 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 MRPL43Q8N983 215 aaKnown RBP5.22□□□□□ -1.57
HERC3-213ENST00000598772 CHURC1Q8WUH1 139 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 GLG1Q92896 1179 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 TCEAL3Q969E4 200 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms