RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 CDY2AQ9Y6F7 541 aa17.09■□□□□ 0.33
LIG1-215ENST00000597901 DOCK5Q9H7D0 1870 aa17.08■□□□□ 0.33
LIG1-215ENST00000597901 SMIM35A0A1B0GVV1 85 aa17.08■□□□□ 0.32
LIG1-215ENST00000597901 M0R2N6 131 aa17.08■□□□□ 0.32
LIG1-215ENST00000597901 ENPP3O14638 875 aa17.08■□□□□ 0.32
LIG1-215ENST00000597901 MSH4O15457 936 aa17.08■□□□□ 0.32
LIG1-215ENST00000597901 EIF5BO60841 1220 aaKnown RBP17.08■□□□□ 0.32
LIG1-215ENST00000597901 UPP2O95045 317 aa17.08■□□□□ 0.32
LIG1-215ENST00000597901 AK2P54819 239 aa17.08■□□□□ 0.32
LIG1-215ENST00000597901 HTRA4P83105 476 aaPredicted RBP17.08■□□□□ 0.32
LIG1-215ENST00000597901 KRT76Q01546 638 aa17.08■□□□□ 0.32
LIG1-215ENST00000597901 ANKRD1Q15327 319 aa17.08■□□□□ 0.32
LIG1-215ENST00000597901 NPY5RQ15761 445 aa17.08■□□□□ 0.32
LIG1-215ENST00000597901 ZNF484Q5JVG2 852 aa17.08■□□□□ 0.32
LIG1-215ENST00000597901 FBXO47Q5MNV8 452 aa17.08■□□□□ 0.32
LIG1-215ENST00000597901 FAM177A1Q8N128 213 aaPredicted RBP17.08■□□□□ 0.32
LIG1-215ENST00000597901 NME8Q8N427 588 aa17.08■□□□□ 0.32
LIG1-215ENST00000597901 IL17RAQ96F46 866 aa17.08■□□□□ 0.32
LIG1-215ENST00000597901 MTCH2Q9Y6C9 303 aa17.08■□□□□ 0.32
LIG1-215ENST00000597901 CYP3A7-CYP3A51PA0A087WV96 503 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 LINC01553A4QN01 128 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 GTPBP6O43824 516 aaPredicted RBP17.07■□□□□ 0.32
LIG1-215ENST00000597901 DTNBO60941 627 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 CDKL5O76039 1030 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 SEC24BO95487 1268 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 PSAPP07602 524 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 CYP3A7P24462 503 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 ERVK-21P61565 698 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 TMEM62Q0P6H9 643 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 GRB10Q13322 594 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 TJAP1Q5JTD0 557 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 SMAP1Q8IYB5 467 aaPredicted RBP17.07■□□□□ 0.32
LIG1-215ENST00000597901 DAGLBQ8NCG7 672 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 IL27Q8NEV9 243 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 SLC5A5Q92911 643 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 TGS1Q96RS0 853 aaKnown RBP17.07■□□□□ 0.32
LIG1-215ENST00000597901 RIT2Q99578 217 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 AGO3Q9H9G7 860 aaKnown RBP17.07■□□□□ 0.32
LIG1-215ENST00000597901 KCNJ14Q9UNX9 436 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 SQORQ9Y6N5 450 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 TANC1Q9C0D5 1861 aa17.07■□□□□ 0.32
LIG1-215ENST00000597901 LPXNO60711 386 aa17.06■□□□□ 0.32
LIG1-215ENST00000597901 CTDNEP1O95476 244 aa17.06■□□□□ 0.32
LIG1-215ENST00000597901 Q4G0T1 1027 aa17.06■□□□□ 0.32
LIG1-215ENST00000597901 KRT40Q6A162 431 aa17.06■□□□□ 0.32
LIG1-215ENST00000597901 CKAP2LQ8IYA6 745 aa17.06■□□□□ 0.32
LIG1-215ENST00000597901 KIAA0319LQ8IZA0 1049 aa17.06■□□□□ 0.32
LIG1-215ENST00000597901 BBXQ8WY36 941 aaPredicted RBP17.06■□□□□ 0.32
LIG1-215ENST00000597901 CELF4Q9BZC1 486 aaKnown RBP17.06■□□□□ 0.32
LIG1-215ENST00000597901 SUGCTQ9HAC7 445 aa17.06■□□□□ 0.32
LIG1-215ENST00000597901 THEGQ9P2T0 379 aa17.06■□□□□ 0.32
LIG1-215ENST00000597901 GABBR1Q9UBS5 961 aa17.06■□□□□ 0.32
LIG1-215ENST00000597901 TCEAL9Q9UHQ7 104 aa17.06■□□□□ 0.32
LIG1-215ENST00000597901 SAMM50Q9Y512 469 aa17.06■□□□□ 0.32
LIG1-215ENST00000597901 TRPV2Q9Y5S1 764 aa17.06■□□□□ 0.32
LIG1-215ENST00000597901 ZBTB42B2RXF5 422 aa17.05■□□□□ 0.32
LIG1-215ENST00000597901 CD52P31358 61 aa17.05■□□□□ 0.32
LIG1-215ENST00000597901 TSHZ1Q6ZSZ6 1077 aa17.05■□□□□ 0.32
LIG1-215ENST00000597901 TRMT1LQ7Z2T5 733 aaKnown RBP17.05■□□□□ 0.32
LIG1-215ENST00000597901 RTN4RL1Q86UN2 441 aaPredicted RBP17.05■□□□□ 0.32
LIG1-215ENST00000597901 MICALL1Q8N3F8 863 aa17.05■□□□□ 0.32
LIG1-215ENST00000597901 NECAB1Q8N987 351 aa17.05■□□□□ 0.32
LIG1-215ENST00000597901 SP7Q8TDD2 431 aaPredicted RBP17.05■□□□□ 0.32
LIG1-215ENST00000597901 ATXN2LQ8WWM7 1075 aaKnown RBP17.05■□□□□ 0.32
LIG1-215ENST00000597901 GJA10Q969M2 543 aa17.05■□□□□ 0.32
LIG1-215ENST00000597901 PHF20Q9BVI0 1012 aa17.05■□□□□ 0.32
LIG1-215ENST00000597901 DISC1Q9NRI5 854 aa17.05■□□□□ 0.32
LIG1-215ENST00000597901 GJB4Q9NTQ9 266 aa17.05■□□□□ 0.32
LIG1-215ENST00000597901 MTUS1Q9ULD2 1270 aa17.05■□□□□ 0.32
LIG1-215ENST00000597901 CDH23Q9H251 3354 aa17.05■□□□□ 0.32
LIG1-215ENST00000597901 CHD9Q3L8U1 2897 aa17.05■□□□□ 0.32
LIG1-215ENST00000597901 COL1A2P08123 1366 aa17.04■□□□□ 0.32
LIG1-215ENST00000597901 WDR64B1ANS9 1081 aa17.04■□□□□ 0.32
LIG1-215ENST00000597901 M0QZ92 97 aa17.04■□□□□ 0.32
LIG1-215ENST00000597901 GAS7O60861 476 aa17.04■□□□□ 0.32
LIG1-215ENST00000597901 PSMD10O75832 226 aa17.04■□□□□ 0.32
LIG1-215ENST00000597901 TDP2O95551 362 aa17.04■□□□□ 0.32
LIG1-215ENST00000597901 NEK4P51957 841 aa17.04■□□□□ 0.32
LIG1-215ENST00000597901 NONOQ15233 471 aaKnown RBP eCLIP17.04■□□□□ 0.32
LIG1-215ENST00000597901 ME3Q16798 604 aa17.04■□□□□ 0.32
LIG1-215ENST00000597901 KRT25Q7Z3Z0 450 aa17.04■□□□□ 0.32
LIG1-215ENST00000597901 MBOAT7Q96N66 472 aa17.04■□□□□ 0.32
LIG1-215ENST00000597901 YME1L1Q96TA2 773 aa17.04■□□□□ 0.32
LIG1-215ENST00000597901 TEKT3Q9BXF9 490 aa17.04■□□□□ 0.32
LIG1-215ENST00000597901 CDHR5Q9HBB8 845 aa17.04■□□□□ 0.32
LIG1-215ENST00000597901 NRBP2Q9NSY0 501 aa17.04■□□□□ 0.32
LIG1-215ENST00000597901 ORC3Q9UBD5 711 aaPredicted RBP17.04■□□□□ 0.32
LIG1-215ENST00000597901 PADI3Q9ULW8 664 aa17.04■□□□□ 0.32
LIG1-215ENST00000597901 STK36Q9NRP7 1315 aa17.03■□□□□ 0.32
LIG1-215ENST00000597901 KDM3AQ9Y4C1 1321 aa17.03■□□□□ 0.32
LIG1-215ENST00000597901 FDPSP14324 419 aaKnown RBP17.03■□□□□ 0.32
LIG1-215ENST00000597901 XBP1P17861 261 aa17.03■□□□□ 0.32
LIG1-215ENST00000597901 INF2Q27J81 1249 aa17.03■□□□□ 0.32
LIG1-215ENST00000597901 LRCH2Q5VUJ6 765 aa17.03■□□□□ 0.32
LIG1-215ENST00000597901 MOXD1Q6UVY6 613 aa17.03■□□□□ 0.32
LIG1-215ENST00000597901 C17orf80Q9BSJ5 609 aa17.03■□□□□ 0.32
LIG1-215ENST00000597901 UNC45AQ9H3U1 944 aa17.03■□□□□ 0.32
LIG1-215ENST00000597901 LMCD1Q9NZU5 365 aa17.03■□□□□ 0.32
LIG1-215ENST00000597901 IGSF9BQ9UPX0 1349 aa17.02■□□□□ 0.32
LIG1-215ENST00000597901 GBF1Q92538 1859 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms