RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 EVPLQ92817 2033 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 LOXHD1Q8IVV2 1947 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 C17orf102A2RUQ5 167 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 RRN3P2A6NIE6 340 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 SPTLC2O15270 562 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 TLR3O15455 904 aaKnown RBP9.37□□□□□ -0.91
VRK3-211ENST00000596445 EVI5O60447 810 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 PQBP1O60828 265 aaKnown RBP9.37□□□□□ -0.91
VRK3-211ENST00000596445 LYPLA2O95372 231 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 CD4P01730 458 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 OATP04181 439 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 INSRRP14616 1297 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 MUTP22033 750 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 RPA1P27694 616 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 MARCKSP29966 332 aaPredicted RBP9.37□□□□□ -0.91
VRK3-211ENST00000596445 LONP1P36776 959 aaKnown RBP9.37□□□□□ -0.91
VRK3-211ENST00000596445 PRKCEQ02156 737 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 FAAP100Q0VG06 881 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 PPFIA1Q13136 1202 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 PTGISQ16647 500 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 XKR3Q5GH77 459 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 ZNF484Q5JVG2 852 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 HAUS3Q68CZ6 603 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 GDF6Q6KF10 455 aaPredicted RBP9.37□□□□□ -0.91
VRK3-211ENST00000596445 CATSPER3Q86XQ3 398 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 TPH2Q8IWU9 490 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 FAM126BQ8IXS8 530 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 C4orf19Q8IY42 314 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 LMBR1Q8WVP7 490 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 AK8Q96MA6 479 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 TRPV6Q9H1D0 765 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 NRBP2Q9NSY0 501 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 SETD4Q9NVD3 440 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 CHMP5Q9NZZ3 219 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 FBXO2Q9UK22 296 aaPredicted RBP9.37□□□□□ -0.91
VRK3-211ENST00000596445 SRPRBQ9Y5M8 271 aaKnown RBP9.37□□□□□ -0.91
VRK3-211ENST00000596445 PDE4DIPQ5VU43 2346 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 COL1A2P08123 1366 aa9.37□□□□□ -0.91
VRK3-211ENST00000596445 ARID2Q68CP9 1835 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 DDX11L8A8MPP1 907 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 PP2D1A8MPX8 630 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 ZBTB42B2RXF5 422 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 SLC26A4O43511 780 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 B4GALT4O60513 344 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 PPP6R2O75170 966 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 MED24O75448 989 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 STBD1O95210 358 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 SPATA31C1P0DKV0 1188 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 CCT6AP40227 531 aaKnown RBP9.36□□□□□ -0.91
VRK3-211ENST00000596445 KRT85P78386 507 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 ADAM17P78536 824 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 CYP4A11Q02928 519 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 CTTNQ14247 550 aaKnown RBP9.36□□□□□ -0.91
VRK3-211ENST00000596445 HIC1Q14526 733 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 GRIK4Q16099 956 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 KRT79Q5XKE5 535 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 TRMT1LQ7Z2T5 733 aaKnown RBP9.36□□□□□ -0.91
VRK3-211ENST00000596445 KRI1Q8N9T8 703 aaKnown RBP9.36□□□□□ -0.91
VRK3-211ENST00000596445 KCNG4Q8TDN1 519 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 DPF3Q92784 378 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 NIFKQ9BYG3 293 aaKnown RBP9.36□□□□□ -0.91
VRK3-211ENST00000596445 TRMT13Q9NUP7 481 aaKnown RBP9.36□□□□□ -0.91
VRK3-211ENST00000596445 WRAP73Q9P2S5 460 aaPredicted RBP9.36□□□□□ -0.91
VRK3-211ENST00000596445 RCOR1Q9UKL0 485 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 CEP290O15078 2479 aa9.36□□□□□ -0.91
VRK3-211ENST00000596445 MBLAC1A4D2B0 266 aaPredicted RBP9.35□□□□□ -0.91
VRK3-211ENST00000596445 TREHO43280 583 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 CLTBP09497 229 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 XRCC6P12956 609 aaKnown RBP eCLIP9.35□□□□□ -0.91
VRK3-211ENST00000596445 NCLP19338 710 aaKnown RBP9.35□□□□□ -0.91
VRK3-211ENST00000596445 CDC25AP30304 524 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 YWHABP31946 246 aaKnown RBP9.35□□□□□ -0.91
VRK3-211ENST00000596445 IGBP1P78318 339 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 ZNF200P98182 395 aaPredicted RBP9.35□□□□□ -0.91
VRK3-211ENST00000596445 GRIN1Q05586 938 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 PTK7Q13308 1070 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 TARBP2Q15633 366 aaKnown RBP9.35□□□□□ -0.91
VRK3-211ENST00000596445 MARCH8Q5T0T0 291 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 ANO5Q75V66 913 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 OTUD6AQ7L8S5 288 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 SERINC5Q86VE9 423 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 C7orf61Q8IZ16 206 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 SNX29Q8TEQ0 813 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 LEO1Q8WVC0 666 aaPredicted RBP9.35□□□□□ -0.91
VRK3-211ENST00000596445 TRAPPC12Q8WVT3 735 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 NACC1Q96RE7 527 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 CTAGE1Q96RT6 745 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 MMTAG2Q9BU76 263 aaKnown RBP9.35□□□□□ -0.91
VRK3-211ENST00000596445 SCAND2PQ9GZW5 306 aaPredicted RBP9.35□□□□□ -0.91
VRK3-211ENST00000596445 CSRNP2Q9H175 543 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 PDLIM7Q9NR12 457 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 ANKEF1Q9NU02 776 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 TMEM39AQ9NV64 488 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 SEPT9Q9UHD8 586 aaPredicted RBP9.35□□□□□ -0.91
VRK3-211ENST00000596445 TUBE1Q9UJT0 475 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 NOD1Q9Y239 953 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 PPME1Q9Y570 386 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 NR2E3Q9Y5X4 410 aa9.35□□□□□ -0.91
VRK3-211ENST00000596445 LAMA2P24043 3122 aaKnown RBP9.35□□□□□ -0.91
VRK3-211ENST00000596445 KDM3AQ9Y4C1 1321 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms