RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 EHHADHQ08426 723 aa16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 LAMC2Q13753 1193 aa16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 DPCR1Q3MIW9 517 aa16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 CCDC144BQ3MJ40 725 aa16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 ANO6Q4KMQ2 910 aa16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 RINT1Q6NUQ1 792 aa16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 SWSAP1Q6NVH7 229 aa16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 C11orf57Q6ZUT1 292 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 UNC13DQ70J99 1090 aa16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 CD99L2Q8TCZ2 262 aa16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 DDX12PQ92771 950 aa16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 RUSC1Q9BVN2 902 aa16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 RBSNQ9H1K0 784 aa16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 ZHX1Q9UKY1 873 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 FRMD3A2A2Y4 597 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 ADCY6O43306 1168 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 CAVIN2O95810 425 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 GNRH1P01148 92 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 SSBP05455 408 aaKnown RBP eCLIP16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 HOXD8P13378 290 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 ATP4AP20648 1035 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 PTGS1P23219 599 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 C1QTNF8P60827 252 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 HSDL1Q3SXM5 330 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 KMT5BQ4FZB7 885 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 PRAMEF19Q5SWL8 479 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 GJC2Q5T442 439 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 C1orf186Q6ZWK4 172 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 TRMT44Q8IYL2 757 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 TRIB2Q92519 343 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 SPATA33Q96N06 139 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 DNAJC25Q9H1X3 360 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 ZNF302Q9NR11 478 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 RMND1Q9NWS8 449 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 SRRDQ9UH36 339 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 EMSYQ7Z589 1322 aa16.42■□□□□ 0.22
SHKBP1-211ENST00000595945 FKTNO75072 461 aa16.41■□□□□ 0.22
SHKBP1-211ENST00000595945 YWHABP31946 246 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-211ENST00000595945 TCF7P36402 384 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-211ENST00000595945 RARRES1P49788 294 aa16.41■□□□□ 0.22
SHKBP1-211ENST00000595945 GIT2Q14161 759 aa16.41■□□□□ 0.22
SHKBP1-211ENST00000595945 FAM160B1Q5W0V3 765 aa16.41■□□□□ 0.22
SHKBP1-211ENST00000595945 ISM2Q6H9L7 571 aa16.41■□□□□ 0.22
SHKBP1-211ENST00000595945 ANO5Q75V66 913 aa16.41■□□□□ 0.22
SHKBP1-211ENST00000595945 DYMQ7RTS9 669 aa16.41■□□□□ 0.22
SHKBP1-211ENST00000595945 TRPV1Q8NER1 839 aa16.41■□□□□ 0.22
SHKBP1-211ENST00000595945 PPTC7Q8NI37 304 aa16.41■□□□□ 0.22
SHKBP1-211ENST00000595945 FAM200AQ8TCP9 573 aa16.41■□□□□ 0.22
SHKBP1-211ENST00000595945 ERO1AQ96HE7 468 aa16.41■□□□□ 0.22
SHKBP1-211ENST00000595945 KCND2Q9NZV8 630 aa16.41■□□□□ 0.22
SHKBP1-211ENST00000595945 GNEQ9Y223 722 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-211ENST00000595945 EVPLQ92817 2033 aa16.41■□□□□ 0.22
SHKBP1-211ENST00000595945 NPHP3-ACAD11A0A0J9YXS1 232 aa16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 ARHGEF35A5YM69 484 aa16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 BACH1O14867 736 aa16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 CYBAP13498 195 aa16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 HOXD10P28358 340 aa16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 STAT5BP51692 787 aa16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 PRKCEQ02156 737 aa16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 MAP2K1Q02750 393 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 TNFAIP2Q03169 654 aa16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 XKR3Q5GH77 459 aa16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 ZNF658Q5TYW1 1059 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 MFSD14CQ5VZR4 134 aa16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 PLPPR4Q7Z2D5 763 aa16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 MLKLQ8NB16 471 aa16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 ZNF296Q8WUU4 475 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 BPIFA3Q9BQP9 254 aa16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 GTPBP4Q9BZE4 634 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 BMP2KQ9NSY1 1161 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-211ENST00000595945 GOLGA6L3A6NEY3 463 aa16.39■□□□□ 0.21
SHKBP1-211ENST00000595945 NOP56O00567 594 aaKnown RBP16.39■□□□□ 0.21
SHKBP1-211ENST00000595945 OATP04181 439 aa16.39■□□□□ 0.21
SHKBP1-211ENST00000595945 GUCY2CP25092 1073 aa16.39■□□□□ 0.21
SHKBP1-211ENST00000595945 IQCB1Q15051 598 aa16.39■□□□□ 0.21
SHKBP1-211ENST00000595945 COBLL1Q53SF7 1204 aa16.39■□□□□ 0.21
SHKBP1-211ENST00000595945 CT47A1Q5JQC4 288 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-211ENST00000595945 PADI6Q6TGC4 694 aa16.39■□□□□ 0.21
SHKBP1-211ENST00000595945 OTUD6AQ7L8S5 288 aa16.39■□□□□ 0.21
SHKBP1-211ENST00000595945 CCDC47Q96A33 483 aaKnown RBP16.39■□□□□ 0.21
SHKBP1-211ENST00000595945 REEP2Q9BRK0 252 aa16.39■□□□□ 0.21
SHKBP1-211ENST00000595945 NIFKQ9BYG3 293 aaKnown RBP16.39■□□□□ 0.21
SHKBP1-211ENST00000595945 CBX8Q9HC52 389 aa16.39■□□□□ 0.21
SHKBP1-211ENST00000595945 EXOC1Q9NV70 894 aa16.39■□□□□ 0.21
SHKBP1-211ENST00000595945 FAM184BQ9ULE4 1060 aa16.39■□□□□ 0.21
SHKBP1-211ENST00000595945 Q9Y3F1 56 aa16.39■□□□□ 0.21
SHKBP1-211ENST00000595945 TMEM150BA6NC51 233 aa16.38■□□□□ 0.21
SHKBP1-211ENST00000595945 PPP1R3GB7ZBB8 358 aa16.38■□□□□ 0.21
SHKBP1-211ENST00000595945 CD44P16070 742 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-211ENST00000595945 ZNF165P49910 485 aa16.38■□□□□ 0.21
SHKBP1-211ENST00000595945 NPEPPSP55786 919 aa16.38■□□□□ 0.21
SHKBP1-211ENST00000595945 COASYQ13057 564 aa16.38■□□□□ 0.21
SHKBP1-211ENST00000595945 MAPK7Q13164 816 aa16.38■□□□□ 0.21
SHKBP1-211ENST00000595945 UTP14CQ5TAP6 766 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-211ENST00000595945 PLA2G4FQ68DD2 849 aa16.38■□□□□ 0.21
SHKBP1-211ENST00000595945 CCDC65Q8IXS2 484 aa16.38■□□□□ 0.21
SHKBP1-211ENST00000595945 AFG1LQ8WV93 481 aa16.38■□□□□ 0.21
SHKBP1-211ENST00000595945 CEP89Q96ST8 783 aa16.38■□□□□ 0.21
SHKBP1-211ENST00000595945 PDLIM7Q9NR12 457 aa16.38■□□□□ 0.21
SHKBP1-211ENST00000595945 PANK4Q9NVE7 773 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms